RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 EDIL3O43854 480 aa21.72■■□□□ 1.07
LMNB1-202ENST00000395354 FCER1AP12319 257 aa21.72■■□□□ 1.07
LMNB1-202ENST00000395354 CT47A1Q5JQC4 288 aaPredicted RBP21.72■■□□□ 1.07
LMNB1-202ENST00000395354 MOXD1Q6UVY6 613 aa21.72■■□□□ 1.07
LMNB1-202ENST00000395354 RNF207Q6ZRF8 634 aa21.72■■□□□ 1.07
LMNB1-202ENST00000395354 GPR142Q7Z601 462 aa21.72■■□□□ 1.07
LMNB1-202ENST00000395354 DACH1Q9UI36 760 aa21.72■■□□□ 1.07
LMNB1-202ENST00000395354 TSKSQ9UJT2 592 aa21.72■■□□□ 1.07
LMNB1-202ENST00000395354 MAN1B1Q9UKM7 699 aa21.72■■□□□ 1.07
LMNB1-202ENST00000395354 A0A087WWV3 80 aa21.71■■□□□ 1.07
LMNB1-202ENST00000395354 GCOM1H8Y6P7 765 aaPredicted RBP21.71■■□□□ 1.07
LMNB1-202ENST00000395354 PIK3CDO00329 1044 aa21.71■■□□□ 1.07
LMNB1-202ENST00000395354 MEIS2O14770 477 aa21.71■■□□□ 1.07
LMNB1-202ENST00000395354 STRNO43815 780 aa21.71■■□□□ 1.07
LMNB1-202ENST00000395354 POLR2MP0CAP2 368 aa21.71■■□□□ 1.07
LMNB1-202ENST00000395354 UBA7P41226 1012 aa21.71■■□□□ 1.07
LMNB1-202ENST00000395354 FXR2P51116 673 aaKnown RBP eCLIP21.71■■□□□ 1.071e-6■■■■□ 19.3
LMNB1-202ENST00000395354 LACTBP83111 547 aaPredicted RBP21.71■■□□□ 1.07
LMNB1-202ENST00000395354 KCTD2Q14681 263 aa21.71■■□□□ 1.07
LMNB1-202ENST00000395354 CALCRLQ16602 461 aa21.71■■□□□ 1.07
LMNB1-202ENST00000395354 PDXDC2PQ6P474 469 aa21.71■■□□□ 1.07
LMNB1-202ENST00000395354 USP17L6PQ6QN14 398 aa21.71■■□□□ 1.07
LMNB1-202ENST00000395354 PLEKHH3Q7Z736 793 aa21.71■■□□□ 1.07
LMNB1-202ENST00000395354 MLKLQ8NB16 471 aa21.71■■□□□ 1.07
LMNB1-202ENST00000395354 GSDMAQ96QA5 445 aa21.71■■□□□ 1.07
LMNB1-202ENST00000395354 CUEDC2Q9H467 287 aa21.71■■□□□ 1.07
LMNB1-202ENST00000395354 A1CFQ9NQ94 594 aaKnown RBP21.71■■□□□ 1.07
LMNB1-202ENST00000395354 DISC1Q9NRI5 854 aa21.71■■□□□ 1.07
LMNB1-202ENST00000395354 IVNS1ABPQ9Y6Y0 642 aa21.71■■□□□ 1.07
LMNB1-202ENST00000395354 PRR29P0C7W0 189 aa21.7■■□□□ 1.06
LMNB1-202ENST00000395354 HOXA13P31271 388 aaPredicted RBP21.7■■□□□ 1.06
LMNB1-202ENST00000395354 TPM4P67936 248 aa21.7■■□□□ 1.06
LMNB1-202ENST00000395354 PLCB2Q00722 1185 aa21.7■■□□□ 1.06
LMNB1-202ENST00000395354 BAATQ14032 418 aaPredicted RBP21.7■■□□□ 1.06
LMNB1-202ENST00000395354 MORC3Q14149 939 aa21.7■■□□□ 1.06
LMNB1-202ENST00000395354 SAMD3Q8N6K7 520 aa21.7■■□□□ 1.06
LMNB1-202ENST00000395354 AOPEPQ8N6M6 819 aa21.7■■□□□ 1.06
LMNB1-202ENST00000395354 IGSF22Q8N9C0 903 aa21.7■■□□□ 1.06
LMNB1-202ENST00000395354 MMP19Q99542 508 aa21.7■■□□□ 1.06
LMNB1-202ENST00000395354 ANO3Q9BYT9 981 aa21.7■■□□□ 1.06
LMNB1-202ENST00000395354 RAB34Q9BZG1 259 aa21.7■■□□□ 1.06
LMNB1-202ENST00000395354 MAF1Q9H063 256 aa21.7■■□□□ 1.06
LMNB1-202ENST00000395354 MAGEF1Q9HAY2 307 aa21.7■■□□□ 1.06
LMNB1-202ENST00000395354 MAP3K20Q9NYL2 800 aaKnown RBP21.7■■□□□ 1.06
LMNB1-202ENST00000395354 CYP39A1Q9NYL5 469 aa21.7■■□□□ 1.06
LMNB1-202ENST00000395354 CYP3A7-CYP3A51PA0A087WV96 503 aa21.7■■□□□ 1.06
LMNB1-202ENST00000395354 MYL1P05976 194 aa21.7■■□□□ 1.06
LMNB1-202ENST00000395354 CYP3A7P24462 503 aa21.7■■□□□ 1.06
LMNB1-202ENST00000395354 HSD17B4P51659 736 aa21.7■■□□□ 1.06
LMNB1-202ENST00000395354 RPS6P62753 249 aaKnown RBP21.7■■□□□ 1.06
LMNB1-202ENST00000395354 GHRHRQ02643 423 aa21.7■■□□□ 1.06
LMNB1-202ENST00000395354 DPYDQ12882 1025 aa21.7■■□□□ 1.06
LMNB1-202ENST00000395354 PDIA5Q14554 519 aa21.7■■□□□ 1.06
LMNB1-202ENST00000395354 KIF22Q14807 665 aa21.7■■□□□ 1.06
LMNB1-202ENST00000395354 TMEM266Q2M3C6 531 aa21.7■■□□□ 1.06
LMNB1-202ENST00000395354 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.7■■□□□ 1.06
LMNB1-202ENST00000395354 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.7■■□□□ 1.06
LMNB1-202ENST00000395354 POTEDQ86YR6 584 aa21.7■■□□□ 1.06
LMNB1-202ENST00000395354 GTPBP6O43824 516 aaPredicted RBP21.69■■□□□ 1.06
LMNB1-202ENST00000395354 FKTNO75072 461 aa21.69■■□□□ 1.06
LMNB1-202ENST00000395354 TDP2O95551 362 aa21.69■■□□□ 1.06
LMNB1-202ENST00000395354 CTGFP29279 349 aa21.69■■□□□ 1.06
LMNB1-202ENST00000395354 STAT6P42226 847 aa21.69■■□□□ 1.06
LMNB1-202ENST00000395354 PSMC4P43686 418 aa21.69■■□□□ 1.06
LMNB1-202ENST00000395354 FCGRTP55899 365 aa21.69■■□□□ 1.06
LMNB1-202ENST00000395354 SEMA3FQ13275 785 aa21.69■■□□□ 1.06
LMNB1-202ENST00000395354 RRAGBQ5VZM2 374 aa21.69■■□□□ 1.06
LMNB1-202ENST00000395354 ABRAQ8N0Z2 381 aa21.69■■□□□ 1.06
LMNB1-202ENST00000395354 MBOAT7Q96N66 472 aa21.69■■□□□ 1.06
LMNB1-202ENST00000395354 ARHGAP39Q9C0H5 1083 aa21.69■■□□□ 1.06
LMNB1-202ENST00000395354 DDX25Q9UHL0 483 aaKnown RBP21.69■■□□□ 1.06
LMNB1-202ENST00000395354 PFASO15067 1338 aa21.69■■□□□ 1.06
LMNB1-202ENST00000395354 TNPO2O14787 897 aaKnown RBP21.68■■□□□ 1.06
LMNB1-202ENST00000395354 SLC37A4O43826 429 aa21.68■■□□□ 1.06
LMNB1-202ENST00000395354 SLC30A10Q6XR72 485 aa21.68■■□□□ 1.06
LMNB1-202ENST00000395354 CABP7Q86V35 215 aa21.68■■□□□ 1.06
LMNB1-202ENST00000395354 PLA2G4DQ86XP0 818 aa21.68■■□□□ 1.06
LMNB1-202ENST00000395354 GRAMD1CQ8IYS0 662 aa21.68■■□□□ 1.06
LMNB1-202ENST00000395354 SYTL5Q8TDW5 730 aaPredicted RBP21.68■■□□□ 1.06
LMNB1-202ENST00000395354 ZNF296Q8WUU4 475 aaPredicted RBP21.68■■□□□ 1.06
LMNB1-202ENST00000395354 CRYGNQ8WXF5 182 aa21.68■■□□□ 1.06
LMNB1-202ENST00000395354 DOCK3Q8IZD9 2030 aa21.68■■□□□ 1.06
LMNB1-202ENST00000395354 SLC15A5A6NIM6 579 aa21.67■■□□□ 1.06
LMNB1-202ENST00000395354 AFMP43652 599 aa21.67■■□□□ 1.06
LMNB1-202ENST00000395354 ZNF75DP51815 510 aa21.67■■□□□ 1.06
LMNB1-202ENST00000395354 KARSQ15046 597 aaKnown RBP21.67■■□□□ 1.06
LMNB1-202ENST00000395354 FCHSD1Q86WN1 690 aa21.67■■□□□ 1.06
LMNB1-202ENST00000395354 TRIM47Q96LD4 638 aa21.67■■□□□ 1.06
LMNB1-202ENST00000395354 TRIM5Q9C035 493 aa21.67■■□□□ 1.06
LMNB1-202ENST00000395354 ZNFX1Q9P2E3 1918 aaKnown RBP21.67■■□□□ 1.06
LMNB1-202ENST00000395354 SPDYE3A6NKU9 549 aa21.66■■□□□ 1.06
LMNB1-202ENST00000395354 POTEB2H3BUK9 544 aa21.66■■□□□ 1.06
LMNB1-202ENST00000395354 PTMAP06454 111 aaKnown RBP21.66■■□□□ 1.06
LMNB1-202ENST00000395354 PGK2P07205 417 aa21.66■■□□□ 1.06
LMNB1-202ENST00000395354 BMP6P22004 513 aa21.66■■□□□ 1.06
LMNB1-202ENST00000395354 ADORA2AP29274 412 aa21.66■■□□□ 1.06
LMNB1-202ENST00000395354 CDC25BP30305 580 aa21.66■■□□□ 1.06
LMNB1-202ENST00000395354 SREBF1P36956 1147 aa21.66■■□□□ 1.06
LMNB1-202ENST00000395354 TECP42680 631 aa21.66■■□□□ 1.06
LMNB1-202ENST00000395354 ISM2Q6H9L7 571 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms