RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 TMEM214Q6NUQ4 689 aaKnown RBP13.09□□□□□ -0.31
RTN1-203ENST00000395090 CCDC84Q86UT8 332 aaPredicted RBP13.09□□□□□ -0.31
RTN1-203ENST00000395090 LPAR1Q92633 364 aa13.09□□□□□ -0.31
RTN1-203ENST00000395090 PIGSQ96S52 555 aa13.09□□□□□ -0.31
RTN1-203ENST00000395090 C2orf49Q9BVC5 232 aaPredicted RBP13.09□□□□□ -0.31
RTN1-203ENST00000395090 RRAGCQ9HB90 399 aa13.09□□□□□ -0.31
RTN1-203ENST00000395090 VAT1LQ9HCJ6 419 aa13.09□□□□□ -0.31
RTN1-203ENST00000395090 PICK1Q9NRD5 415 aa13.09□□□□□ -0.31
RTN1-203ENST00000395090 VPS54Q9P1Q0 977 aa13.09□□□□□ -0.31
RTN1-203ENST00000395090 KCNJ14Q9UNX9 436 aa13.09□□□□□ -0.31
RTN1-203ENST00000395090 FZD1Q9UP38 647 aa13.09□□□□□ -0.31
RTN1-203ENST00000395090 KIF28PB7ZC32 967 aa13.08□□□□□ -0.32
RTN1-203ENST00000395090 hCG_1984214I3L0E3 225 aa13.08□□□□□ -0.32
RTN1-203ENST00000395090 SLC16A2P36021 539 aa13.08□□□□□ -0.32
RTN1-203ENST00000395090 SAFBQ15424 915 aaKnown RBP eCLIP13.08□□□□□ -0.32
RTN1-203ENST00000395090 C6orf118Q5T5N4 469 aa13.08□□□□□ -0.32
RTN1-203ENST00000395090 GALNT17Q6IS24 598 aa13.08□□□□□ -0.32
RTN1-203ENST00000395090 FAM173BQ6P4H8 233 aa13.08□□□□□ -0.32
RTN1-203ENST00000395090 CAPN12Q6ZSI9 719 aa13.08□□□□□ -0.32
RTN1-203ENST00000395090 ZNF713Q8N859 430 aaPredicted RBP13.08□□□□□ -0.32
RTN1-203ENST00000395090 TMEM87AQ8NBN3 555 aa13.08□□□□□ -0.32
RTN1-203ENST00000395090 NUP88Q99567 741 aaPredicted RBP13.08□□□□□ -0.32
RTN1-203ENST00000395090 SEC63Q9UGP8 760 aaKnown RBP13.08□□□□□ -0.32
RTN1-203ENST00000395090 MYH6P13533 1939 aa13.08□□□□□ -0.32
RTN1-203ENST00000395090 BTBD18B2RXH4 712 aa13.07□□□□□ -0.32
RTN1-203ENST00000395090 GOLGA6L22H0YM25 854 aa13.07□□□□□ -0.32
RTN1-203ENST00000395090 STXBP3O00186 592 aa13.07□□□□□ -0.32
RTN1-203ENST00000395090 ZBTB5O15062 677 aa13.07□□□□□ -0.32
RTN1-203ENST00000395090 NF2P35240 595 aa13.07□□□□□ -0.32
RTN1-203ENST00000395090 IREB2P48200 963 aaKnown RBP13.07□□□□□ -0.32
RTN1-203ENST00000395090 SMCPP49901 116 aaPredicted RBP13.07□□□□□ -0.32
RTN1-203ENST00000395090 BACE1P56817 501 aa13.07□□□□□ -0.32
RTN1-203ENST00000395090 FOXD4L6Q3SYB3 417 aaPredicted RBP13.07□□□□□ -0.32
RTN1-203ENST00000395090 WWC2Q6AWC2 1192 aa13.07□□□□□ -0.32
RTN1-203ENST00000395090 FOXD4L3Q6VB84 417 aaPredicted RBP13.07□□□□□ -0.32
RTN1-203ENST00000395090 DIS3L2Q8IYB7 885 aaKnown RBP13.07□□□□□ -0.32
RTN1-203ENST00000395090 SPICE1Q8N0Z3 855 aa13.07□□□□□ -0.32
RTN1-203ENST00000395090 ZNF280CQ8ND82 737 aa13.07□□□□□ -0.32
RTN1-203ENST00000395090 PIBF1Q8WXW3 757 aa13.07□□□□□ -0.32
RTN1-203ENST00000395090 GRIP2Q9C0E4 1043 aa13.07□□□□□ -0.32
RTN1-203ENST00000395090 AS3MTQ9HBK9 375 aa13.07□□□□□ -0.32
RTN1-203ENST00000395090 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.07□□□□□ -0.32
RTN1-203ENST00000395090 LMBRD1Q9NUN5 540 aa13.07□□□□□ -0.32
RTN1-203ENST00000395090 SEPT3Q9UH03 358 aa13.07□□□□□ -0.32
RTN1-203ENST00000395090 ZHX2Q9Y6X8 837 aa13.07□□□□□ -0.32
RTN1-203ENST00000395090 ATAD5Q96QE3 1844 aa13.07□□□□□ -0.32
RTN1-203ENST00000395090 C19orf81C9J6K1 198 aa13.06□□□□□ -0.32
RTN1-203ENST00000395090 TMEM232C9JQI7 657 aa13.06□□□□□ -0.32
RTN1-203ENST00000395090 PTMSP20962 102 aa13.06□□□□□ -0.32
RTN1-203ENST00000395090 CALML3P27482 149 aa13.06□□□□□ -0.32
RTN1-203ENST00000395090 CTSOP43234 321 aaPredicted RBP13.06□□□□□ -0.32
RTN1-203ENST00000395090 USP14P54578 494 aa13.06□□□□□ -0.32
RTN1-203ENST00000395090 KRT85P78386 507 aa13.06□□□□□ -0.32
RTN1-203ENST00000395090 SPP2Q13103 211 aa13.06□□□□□ -0.32
RTN1-203ENST00000395090 TMCO4Q5TGY1 634 aa13.06□□□□□ -0.32
RTN1-203ENST00000395090 NOSTRINQ8IVI9 506 aa13.06□□□□□ -0.32
RTN1-203ENST00000395090 CHURC1Q8WUH1 139 aa13.06□□□□□ -0.32
RTN1-203ENST00000395090 ZMYND12Q9H0C1 365 aa13.06□□□□□ -0.32
RTN1-203ENST00000395090 CFAP45Q9UL16 551 aa13.06□□□□□ -0.32
RTN1-203ENST00000395090 CNPY2Q9Y2B0 182 aa13.06□□□□□ -0.32
RTN1-203ENST00000395090 AFG3L2Q9Y4W6 797 aa13.06□□□□□ -0.32
RTN1-203ENST00000395090 SNCAIPQ9Y6H5 919 aa13.06□□□□□ -0.32
RTN1-203ENST00000395090 DOCK1Q14185 1865 aa13.06□□□□□ -0.32
RTN1-203ENST00000395090 ESYT2A0FGR8 921 aa13.06□□□□□ -0.32
RTN1-203ENST00000395090 UNCXA6NJT0 531 aa13.06□□□□□ -0.32
RTN1-203ENST00000395090 WDR46O15213 610 aaKnown RBP13.06□□□□□ -0.32
RTN1-203ENST00000395090 PPP1R11O60927 126 aaPredicted RBP13.06□□□□□ -0.32
RTN1-203ENST00000395090 NLRP5P59047 1200 aa13.06□□□□□ -0.32
RTN1-203ENST00000395090 VGLL4Q14135 290 aa13.06□□□□□ -0.32
RTN1-203ENST00000395090 TEAD4Q15561 434 aa13.06□□□□□ -0.32
RTN1-203ENST00000395090 FAM83BQ5T0W9 1011 aa13.06□□□□□ -0.32
RTN1-203ENST00000395090 SYDE2Q5VT97 1194 aa13.06□□□□□ -0.32
RTN1-203ENST00000395090 LDHDQ86WU2 507 aa13.06□□□□□ -0.32
RTN1-203ENST00000395090 ZNF295-AS1Q8N0V1 137 aa13.06□□□□□ -0.32
RTN1-203ENST00000395090 DAGLBQ8NCG7 672 aa13.06□□□□□ -0.32
RTN1-203ENST00000395090 CCDC148Q8NFR7 591 aa13.06□□□□□ -0.32
RTN1-203ENST00000395090 RHBDD1Q8TEB9 315 aa13.06□□□□□ -0.32
RTN1-203ENST00000395090 CCDC12Q8WUD4 166 aaPredicted RBP13.06□□□□□ -0.32
RTN1-203ENST00000395090 TNFRSF25Q93038 417 aa13.06□□□□□ -0.32
RTN1-203ENST00000395090 C12orf42Q96LP6 360 aa13.06□□□□□ -0.32
RTN1-203ENST00000395090 ZNF396Q96N95 335 aaPredicted RBP13.06□□□□□ -0.32
RTN1-203ENST00000395090 FEZ1Q99689 392 aa13.06□□□□□ -0.32
RTN1-203ENST00000395090 NIFKQ9BYG3 293 aaKnown RBP13.06□□□□□ -0.32
RTN1-203ENST00000395090 SCAND2PQ9GZW5 306 aaPredicted RBP13.06□□□□□ -0.32
RTN1-203ENST00000395090 FEM1BQ9UK73 627 aa13.06□□□□□ -0.32
RTN1-203ENST00000395090 RCOR1Q9UKL0 485 aa13.06□□□□□ -0.32
RTN1-203ENST00000395090 PRR12Q9ULL5 1215 aa13.06□□□□□ -0.32
RTN1-203ENST00000395090 SERTM1A2A2V5 107 aa13.05□□□□□ -0.32
RTN1-203ENST00000395090 AXIN1O15169 862 aa13.05□□□□□ -0.32
RTN1-203ENST00000395090 PRPF40AO75400 957 aaKnown RBP13.05□□□□□ -0.32
RTN1-203ENST00000395090 ABL1P00519 1130 aa13.05□□□□□ -0.32
RTN1-203ENST00000395090 BMP1P13497 986 aa13.05□□□□□ -0.32
RTN1-203ENST00000395090 KRT2P35908 639 aa13.05□□□□□ -0.32
RTN1-203ENST00000395090 STAT2P52630 851 aa13.05□□□□□ -0.32
RTN1-203ENST00000395090 PRKG1Q13976 671 aa13.05□□□□□ -0.32
RTN1-203ENST00000395090 LAPTM4AQ15012 233 aa13.05□□□□□ -0.32
RTN1-203ENST00000395090 LDLRAD1Q5T700 205 aa13.05□□□□□ -0.32
RTN1-203ENST00000395090 MAP1SQ66K74 1059 aaPredicted RBP13.05□□□□□ -0.32
RTN1-203ENST00000395090 SND1Q7KZF4 910 aaKnown RBP eCLIP13.05□□□□□ -0.32
RTN1-203ENST00000395090 HEATR3Q7Z4Q2 680 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms