RNA–Protein interactions for RNA: ENST00000395065.7

NXF3-201, Transcript of nuclear RNA export factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF3, Length 1,938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-201ENST00000395065 TRIM28Q13263 835 aaKnown RBP6.95□□□□□ -1.3
NXF3-201ENST00000395065 ITIH4Q14624 930 aa6.95□□□□□ -1.3
NXF3-201ENST00000395065 SPDYCQ5MJ68 293 aa6.95□□□□□ -1.3
NXF3-201ENST00000395065 ANKRD40Q6AI12 368 aa6.95□□□□□ -1.3
NXF3-201ENST00000395065 HIBCHQ6NVY1 386 aaPredicted RBP6.95□□□□□ -1.3
NXF3-201ENST00000395065 MIS18BP1Q6P0N0 1132 aa6.95□□□□□ -1.3
NXF3-201ENST00000395065 C2CD5Q86YS7 1000 aa6.95□□□□□ -1.3
NXF3-201ENST00000395065 KIRREL3Q8IZU9 778 aa6.95□□□□□ -1.3
NXF3-201ENST00000395065 VGLL2Q8N8G2 317 aa6.95□□□□□ -1.3
NXF3-201ENST00000395065 USP38Q8NB14 1042 aa6.95□□□□□ -1.3
NXF3-201ENST00000395065 SCFD2Q8WU76 684 aa6.95□□□□□ -1.3
NXF3-201ENST00000395065 TCP11Q8WWU5 503 aa6.95□□□□□ -1.3
NXF3-201ENST00000395065 BAP1Q92560 729 aa6.95□□□□□ -1.3
NXF3-201ENST00000395065 TLCD1Q96CP7 247 aa6.95□□□□□ -1.3
NXF3-201ENST00000395065 SPDL1Q96EA4 605 aa6.95□□□□□ -1.3
NXF3-201ENST00000395065 STAMBPL1Q96FJ0 436 aa6.95□□□□□ -1.3
NXF3-201ENST00000395065 SPAG5Q96R06 1193 aa6.95□□□□□ -1.3
NXF3-201ENST00000395065 KRT12Q99456 494 aa6.95□□□□□ -1.3
NXF3-201ENST00000395065 ZKSCAN3Q9BRR0 538 aa6.95□□□□□ -1.3
NXF3-201ENST00000395065 MOV10L1Q9BXT6 1211 aaKnown RBP6.95□□□□□ -1.3
NXF3-201ENST00000395065 CCSER1Q9C0I3 900 aa6.95□□□□□ -1.3
NXF3-201ENST00000395065 CNOT10Q9H9A5 744 aaKnown RBP6.95□□□□□ -1.3
NXF3-201ENST00000395065 SPATS2LQ9NUQ6 558 aaKnown RBP6.95□□□□□ -1.3
NXF3-201ENST00000395065 SWAP70Q9UH65 585 aa6.95□□□□□ -1.3
NXF3-201ENST00000395065 CORO1CQ9ULV4 474 aaPredicted RBP6.95□□□□□ -1.3
NXF3-201ENST00000395065 ANKRD36CQ5JPF3 1778 aa6.95□□□□□ -1.3
NXF3-201ENST00000395065 MYH7BA7E2Y1 1941 aa6.94□□□□□ -1.3
NXF3-201ENST00000395065 KAT6BQ8WYB5 2073 aa6.94□□□□□ -1.3
NXF3-201ENST00000395065 COL16A1Q07092 1604 aaPredicted RBP6.94□□□□□ -1.3
NXF3-201ENST00000395065 EPHB6O15197 1021 aa6.94□□□□□ -1.3
NXF3-201ENST00000395065 NKRFO15226 690 aaKnown RBP eCLIP6.94□□□□□ -1.3
NXF3-201ENST00000395065 AKR1B10O60218 316 aa6.94□□□□□ -1.3
NXF3-201ENST00000395065 IDH1O75874 414 aaKnown RBP6.94□□□□□ -1.3
NXF3-201ENST00000395065 ANP32DO95626 131 aa6.94□□□□□ -1.3
NXF3-201ENST00000395065 IL2RBP14784 551 aa6.94□□□□□ -1.3
NXF3-201ENST00000395065 GNAT2P19087 354 aa6.94□□□□□ -1.3
NXF3-201ENST00000395065 STAT6P42226 847 aa6.94□□□□□ -1.3
NXF3-201ENST00000395065 CCNG1P51959 295 aa6.94□□□□□ -1.3
NXF3-201ENST00000395065 ERVK-9P63128 1117 aa6.94□□□□□ -1.3
NXF3-201ENST00000395065 TNNC1P63316 161 aa6.94□□□□□ -1.3
NXF3-201ENST00000395065 BIRC2Q13490 618 aa6.94□□□□□ -1.3
NXF3-201ENST00000395065 MTMR3Q13615 1198 aa6.94□□□□□ -1.3
NXF3-201ENST00000395065 PPP1R7Q15435 360 aa6.94□□□□□ -1.3
NXF3-201ENST00000395065 NAB2Q15742 525 aa6.94□□□□□ -1.3
NXF3-201ENST00000395065 HGSNATQ68CP4 663 aa6.94□□□□□ -1.3
NXF3-201ENST00000395065 MSL1Q68DK7 614 aa6.94□□□□□ -1.3
NXF3-201ENST00000395065 CCDC84Q86UT8 332 aaPredicted RBP6.94□□□□□ -1.3
NXF3-201ENST00000395065 TTLL11Q8NHH1 800 aa6.94□□□□□ -1.3
NXF3-201ENST00000395065 CCDC26Q8TAB7 109 aa6.94□□□□□ -1.3
NXF3-201ENST00000395065 NUP133Q8WUM0 1156 aa6.94□□□□□ -1.3
NXF3-201ENST00000395065 SEC14L1Q92503 715 aa6.94□□□□□ -1.3
NXF3-201ENST00000395065 UPF1Q92900 1129 aaKnown RBP eCLIP6.94□□□□□ -1.3
NXF3-201ENST00000395065 SAAL1Q96ER3 474 aa6.94□□□□□ -1.3
NXF3-201ENST00000395065 CHMP6Q96FZ7 201 aa6.94□□□□□ -1.3
NXF3-201ENST00000395065 CCDC85AQ96PX6 553 aaPredicted RBP6.94□□□□□ -1.3
NXF3-201ENST00000395065 UBAC1Q9BSL1 405 aa6.94□□□□□ -1.3
NXF3-201ENST00000395065 RNF41Q9H4P4 317 aaPredicted RBP6.94□□□□□ -1.3
NXF3-201ENST00000395065 SLC39A2Q9NP94 309 aa6.94□□□□□ -1.3
NXF3-201ENST00000395065 BSDC1Q9NW68 430 aaPredicted RBP6.94□□□□□ -1.3
NXF3-201ENST00000395065 BAIAP2L1Q9UHR4 511 aa6.94□□□□□ -1.3
NXF3-201ENST00000395065 V9GY48 417 aaPredicted RBP6.94□□□□□ -1.3
NXF3-201ENST00000395065 UTRNP46939 3433 aa6.94□□□□□ -1.3
NXF3-201ENST00000395065 PNPLA7Q6ZV29 1317 aa6.94□□□□□ -1.3
NXF3-201ENST00000395065 RTL9Q8NET4 1388 aa6.94□□□□□ -1.3
NXF3-201ENST00000395065 NHSL1Q5SYE7 1610 aa6.94□□□□□ -1.3
NXF3-201ENST00000395065 FRMD3A2A2Y4 597 aa6.93□□□□□ -1.3
NXF3-201ENST00000395065 A6NHS1 94 aa6.93□□□□□ -1.3
NXF3-201ENST00000395065 LRRC53A6NM62 1247 aa6.93□□□□□ -1.3
NXF3-201ENST00000395065 PHF20L1A8MW92 1017 aa6.93□□□□□ -1.3
NXF3-201ENST00000395065 BUB1BO60566 1050 aaPredicted RBP6.93□□□□□ -1.3
NXF3-201ENST00000395065 SKAP2O75563 359 aaPredicted RBP6.93□□□□□ -1.3
NXF3-201ENST00000395065 PRDM1O75626 825 aa6.93□□□□□ -1.3
NXF3-201ENST00000395065 UQCRFS1P1P0C7P4 283 aa6.93□□□□□ -1.3
NXF3-201ENST00000395065 ZBTB48P10074 688 aaPredicted RBP6.93□□□□□ -1.3
NXF3-201ENST00000395065 CTNNA1P35221 906 aaKnown RBP6.93□□□□□ -1.3
NXF3-201ENST00000395065 GCKP35557 465 aa6.93□□□□□ -1.3
NXF3-201ENST00000395065 MTIF2P46199 727 aaKnown RBP6.93□□□□□ -1.3
NXF3-201ENST00000395065 RWDD2BP57060 319 aa6.93□□□□□ -1.3
NXF3-201ENST00000395065 RASSF7Q02833 373 aa6.93□□□□□ -1.3
NXF3-201ENST00000395065 TROAPQ12815 778 aa6.93□□□□□ -1.3
NXF3-201ENST00000395065 MYO1EQ12965 1108 aa6.93□□□□□ -1.3
NXF3-201ENST00000395065 NKX1-1Q15270 411 aaPredicted RBP6.93□□□□□ -1.3
NXF3-201ENST00000395065 GRIPAP1Q4V328 841 aa6.93□□□□□ -1.3
NXF3-201ENST00000395065 VWA3BQ502W6 1294 aa6.93□□□□□ -1.3
NXF3-201ENST00000395065 CENPPQ6IPU0 288 aa6.93□□□□□ -1.3
NXF3-201ENST00000395065 CPLX4Q7Z7G2 160 aa6.93□□□□□ -1.3
NXF3-201ENST00000395065 CCDC63Q8NA47 563 aa6.93□□□□□ -1.3
NXF3-201ENST00000395065 CCDC197Q8NCU1 140 aa6.93□□□□□ -1.3
NXF3-201ENST00000395065 SYN2Q92777 582 aaPredicted RBP6.93□□□□□ -1.3
NXF3-201ENST00000395065 CNKSR1Q969H4 720 aa6.93□□□□□ -1.3
NXF3-201ENST00000395065 THOC1Q96FV9 657 aaKnown RBP6.93□□□□□ -1.3
NXF3-201ENST00000395065 CALR3Q96L12 384 aaKnown RBP6.93□□□□□ -1.3
NXF3-201ENST00000395065 ZNF570Q96NI8 536 aa6.93□□□□□ -1.3
NXF3-201ENST00000395065 XPO6Q96QU8 1125 aaKnown RBP6.93□□□□□ -1.3
NXF3-201ENST00000395065 FAM129AQ9BZQ8 928 aa6.93□□□□□ -1.3
NXF3-201ENST00000395065 CUEDC2Q9H467 287 aa6.93□□□□□ -1.3
NXF3-201ENST00000395065 CCDC134Q9H6E4 229 aa6.93□□□□□ -1.3
NXF3-201ENST00000395065 MAGEF1Q9HAY2 307 aa6.93□□□□□ -1.3
NXF3-201ENST00000395065 SLC5A4Q9NY91 659 aa6.93□□□□□ -1.3
NXF3-201ENST00000395065 ANAPC4Q9UJX5 808 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms