RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 DEFB129Q9H1M3 183 aa17.61■□□□□ 0.41
SMARCD1-202ENST00000394963 EHMT1Q9H9B1 1298 aa17.61■□□□□ 0.41
SMARCD1-202ENST00000394963 CICQ96RK0 1608 aaPredicted RBP17.61■□□□□ 0.41
SMARCD1-202ENST00000394963 CETN3O15182 167 aa17.61■□□□□ 0.41
SMARCD1-202ENST00000394963 ARHGEF16Q5VV41 709 aa17.61■□□□□ 0.41
SMARCD1-202ENST00000394963 SFR1Q86XK3 245 aa17.61■□□□□ 0.41
SMARCD1-202ENST00000394963 FAM212AQ96EL1 285 aa17.61■□□□□ 0.41
SMARCD1-202ENST00000394963 DYDC2Q96IM9 177 aa17.61■□□□□ 0.41
SMARCD1-202ENST00000394963 ZNF668Q96K58 619 aaPredicted RBP17.61■□□□□ 0.41
SMARCD1-202ENST00000394963 NT5C3AQ9H0P0 336 aa17.61■□□□□ 0.41
SMARCD1-202ENST00000394963 ARHGAP44Q17R89 818 aa17.61■□□□□ 0.41
SMARCD1-202ENST00000394963 C15orf52Q6ZUT6 534 aaKnown RBP17.61■□□□□ 0.41
SMARCD1-202ENST00000394963 MIER3Q7Z3K6 550 aa17.61■□□□□ 0.41
SMARCD1-202ENST00000394963 DCAF4Q8WV16 495 aa17.61■□□□□ 0.41
SMARCD1-202ENST00000394963 PDCL3Q9H2J4 239 aa17.61■□□□□ 0.41
SMARCD1-202ENST00000394963 EMILIN3Q9NT22 766 aa17.61■□□□□ 0.41
SMARCD1-202ENST00000394963 ADD3Q9UEY8 706 aaKnown RBP17.61■□□□□ 0.41
SMARCD1-202ENST00000394963 MRPL11Q9Y3B7 192 aaKnown RBP17.61■□□□□ 0.41
SMARCD1-202ENST00000394963 BTAF1O14981 1849 aa17.6■□□□□ 0.41
SMARCD1-202ENST00000394963 TNFAIP1Q13829 316 aa17.6■□□□□ 0.41
SMARCD1-202ENST00000394963 ODR4Q5SWX8 454 aa17.6■□□□□ 0.41
SMARCD1-202ENST00000394963 SLC35F6Q8N357 371 aa17.6■□□□□ 0.41
SMARCD1-202ENST00000394963 RAD54LQ92698 747 aa17.6■□□□□ 0.41
SMARCD1-202ENST00000394963 CCSER1Q9C0I3 900 aa17.6■□□□□ 0.41
SMARCD1-202ENST00000394963 LRRC27Q9C0I9 530 aa17.6■□□□□ 0.41
SMARCD1-202ENST00000394963 NYAP2Q9P242 653 aa17.6■□□□□ 0.41
SMARCD1-202ENST00000394963 RRP9O43818 475 aaKnown RBP17.6■□□□□ 0.41
SMARCD1-202ENST00000394963 CYP26C1Q6V0L0 522 aa17.6■□□□□ 0.41
SMARCD1-202ENST00000394963 ADSSL1Q8N142 457 aa17.6■□□□□ 0.41
SMARCD1-202ENST00000394963 LSM14BQ9BX40 385 aaKnown RBP17.6■□□□□ 0.41
SMARCD1-202ENST00000394963 CXCR5P32302 372 aa17.6■□□□□ 0.41
SMARCD1-202ENST00000394963 CYLC1P35663 651 aaPredicted RBP17.6■□□□□ 0.41
SMARCD1-202ENST00000394963 KIF5AQ12840 1032 aa17.6■□□□□ 0.41
SMARCD1-202ENST00000394963 COASYQ13057 564 aa17.6■□□□□ 0.41
SMARCD1-202ENST00000394963 RAD9BQ6WBX8 426 aa17.6■□□□□ 0.41
SMARCD1-202ENST00000394963 GADL1Q6ZQY3 521 aa17.6■□□□□ 0.41
SMARCD1-202ENST00000394963 ZNF771Q7L3S4 317 aaPredicted RBP17.6■□□□□ 0.41
SMARCD1-202ENST00000394963 EPN1Q9Y6I3 576 aaPredicted RBP17.6■□□□□ 0.41
SMARCD1-202ENST00000394963 N4BP2Q86UW6 1770 aaPredicted RBP17.6■□□□□ 0.41
SMARCD1-202ENST00000394963 CTAGE9A4FU28 777 aa17.59■□□□□ 0.41
SMARCD1-202ENST00000394963 PPP1R12BO60237 982 aaPredicted RBP17.59■□□□□ 0.41
SMARCD1-202ENST00000394963 STX10O60499 249 aa17.59■□□□□ 0.41
SMARCD1-202ENST00000394963 MED24O75448 989 aa17.59■□□□□ 0.41
SMARCD1-202ENST00000394963 SARSP49591 514 aaKnown RBP17.59■□□□□ 0.41
SMARCD1-202ENST00000394963 LLGL1Q15334 1064 aa17.59■□□□□ 0.41
SMARCD1-202ENST00000394963 DNAAF5Q86Y56 855 aa17.59■□□□□ 0.41
SMARCD1-202ENST00000394963 FAM151AQ8WW52 585 aa17.59■□□□□ 0.41
SMARCD1-202ENST00000394963 CCDC127Q96BQ5 260 aa17.59■□□□□ 0.41
SMARCD1-202ENST00000394963 IKZF4Q9H2S9 585 aa17.59■□□□□ 0.41
SMARCD1-202ENST00000394963 TMEM150BA6NC51 233 aa17.59■□□□□ 0.41
SMARCD1-202ENST00000394963 FAM86B1E9PN63 330 aa17.59■□□□□ 0.41
SMARCD1-202ENST00000394963 FAM86B2P0C5J1 330 aa17.59■□□□□ 0.41
SMARCD1-202ENST00000394963 NR1I3Q14994 352 aa17.59■□□□□ 0.41
SMARCD1-202ENST00000394963 E2F4Q16254 413 aa17.59■□□□□ 0.41
SMARCD1-202ENST00000394963 ZNF526Q8TF50 670 aaPredicted RBP17.59■□□□□ 0.41
SMARCD1-202ENST00000394963 HACL1Q9UJ83 578 aa17.59■□□□□ 0.41
SMARCD1-202ENST00000394963 LAMA4Q16363 1823 aa17.59■□□□□ 0.41
SMARCD1-202ENST00000394963 NFIBO00712 420 aa17.59■□□□□ 0.41
SMARCD1-202ENST00000394963 MFAP3LO75121 409 aa17.59■□□□□ 0.41
SMARCD1-202ENST00000394963 ZBED4O75132 1171 aa17.59■□□□□ 0.41
SMARCD1-202ENST00000394963 PPP2R3AQ06190 1150 aa17.59■□□□□ 0.41
SMARCD1-202ENST00000394963 PRPF4BQ13523 1007 aaKnown RBP17.59■□□□□ 0.41
SMARCD1-202ENST00000394963 TMCO3Q6UWJ1 677 aa17.59■□□□□ 0.41
SMARCD1-202ENST00000394963 HS2ST1Q7LGA3 356 aa17.59■□□□□ 0.41
SMARCD1-202ENST00000394963 FAM178BQ8IXR5 827 aa17.59■□□□□ 0.41
SMARCD1-202ENST00000394963 MB21D1Q8N884 522 aa17.59■□□□□ 0.41
SMARCD1-202ENST00000394963 HSD3B7Q9H2F3 369 aa17.59■□□□□ 0.41
SMARCD1-202ENST00000394963 BCAS3Q9H6U6 928 aa17.59■□□□□ 0.41
SMARCD1-202ENST00000394963 GINS2Q9Y248 185 aa17.59■□□□□ 0.41
SMARCD1-202ENST00000394963 PHACTR2O75167 634 aa17.58■□□□□ 0.41
SMARCD1-202ENST00000394963 ZMYND10O75800 440 aa17.58■□□□□ 0.41
SMARCD1-202ENST00000394963 GYPCP04921 128 aa17.58■□□□□ 0.41
SMARCD1-202ENST00000394963 DNM2P50570 870 aa17.58■□□□□ 0.41
SMARCD1-202ENST00000394963 ECM1Q16610 540 aa17.58■□□□□ 0.41
SMARCD1-202ENST00000394963 KCTD19Q17RG1 926 aaPredicted RBP17.58■□□□□ 0.41
SMARCD1-202ENST00000394963 TUBGCP6Q96RT7 1819 aa17.58■□□□□ 0.41
SMARCD1-202ENST00000394963 RGL2O15211 777 aa17.58■□□□□ 0.4
SMARCD1-202ENST00000394963 EXOC3O60645 756 aa17.58■□□□□ 0.4
SMARCD1-202ENST00000394963 NMT1P30419 496 aaKnown RBP17.58■□□□□ 0.4
SMARCD1-202ENST00000394963 ZC2HC1CQ53FD0 456 aaPredicted RBP17.58■□□□□ 0.4
SMARCD1-202ENST00000394963 FAM102BQ5T8I3 360 aa17.58■□□□□ 0.4
SMARCD1-202ENST00000394963 SLFN12Q8IYM2 578 aa17.58■□□□□ 0.4
SMARCD1-202ENST00000394963 LRRN4CLQ8ND94 238 aa17.58■□□□□ 0.4
SMARCD1-202ENST00000394963 NWD2Q9ULI1 1742 aa17.58■□□□□ 0.4
SMARCD1-202ENST00000394963 SRGAP2O75044 1071 aa17.58■□□□□ 0.4
SMARCD1-202ENST00000394963 KIF20AO95235 890 aa17.58■□□□□ 0.4
SMARCD1-202ENST00000394963 CT47A1Q5JQC4 288 aaPredicted RBP17.58■□□□□ 0.4
SMARCD1-202ENST00000394963 ANKS1AQ92625 1134 aa17.58■□□□□ 0.4
SMARCD1-202ENST00000394963 NDST4Q9H3R1 872 aa17.58■□□□□ 0.4
SMARCD1-202ENST00000394963 CATSPER3Q86XQ3 398 aa17.57■□□□□ 0.4
SMARCD1-202ENST00000394963 TMTC1Q8IUR5 882 aa17.57■□□□□ 0.4
SMARCD1-202ENST00000394963 C4orf32Q8N8J7 132 aa17.57■□□□□ 0.4
SMARCD1-202ENST00000394963 CAMKK2Q96RR4 588 aa17.57■□□□□ 0.4
SMARCD1-202ENST00000394963 GGA3Q9NZ52 723 aa17.57■□□□□ 0.4
SMARCD1-202ENST00000394963 TMOD4Q9NZQ9 345 aa17.57■□□□□ 0.4
SMARCD1-202ENST00000394963 GOLGA8IPA6NC78 632 aa17.57■□□□□ 0.4
SMARCD1-202ENST00000394963 GOLGA8JA6NMD2 632 aa17.57■□□□□ 0.4
SMARCD1-202ENST00000394963 XKR9Q5GH70 373 aa17.57■□□□□ 0.4
SMARCD1-202ENST00000394963 ANKRD35Q8N283 1001 aa17.57■□□□□ 0.4
SMARCD1-202ENST00000394963 JAKMIP2Q96AA8 810 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms