RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 PLVAPQ9BX97 442 aa12.83□□□□□ -0.36
UBE2D3-209ENST00000394804 SPZ1Q9BXG8 430 aa12.83□□□□□ -0.36
UBE2D3-209ENST00000394804 A0A087WUV0 522 aaPredicted RBP12.82□□□□□ -0.36
UBE2D3-209ENST00000394804 TLDC2A0PJX2 215 aa12.82□□□□□ -0.36
UBE2D3-209ENST00000394804 POTEMA6NI47 508 aa12.82□□□□□ -0.36
UBE2D3-209ENST00000394804 ZBTB22O15209 634 aa12.82□□□□□ -0.36
UBE2D3-209ENST00000394804 ZNF185O15231 689 aa12.82□□□□□ -0.36
UBE2D3-209ENST00000394804 TNFAIP3P21580 790 aa12.82□□□□□ -0.36
UBE2D3-209ENST00000394804 NR2F2P24468 414 aa12.82□□□□□ -0.36
UBE2D3-209ENST00000394804 MAGEA9P43362 315 aa12.82□□□□□ -0.36
UBE2D3-209ENST00000394804 SF3B2Q13435 895 aaKnown RBP12.82□□□□□ -0.36
UBE2D3-209ENST00000394804 GPATCH4Q5T3I0 446 aaKnown RBP12.82□□□□□ -0.36
UBE2D3-209ENST00000394804 SPATS2Q86XZ4 545 aaKnown RBP12.82□□□□□ -0.36
UBE2D3-209ENST00000394804 SPATA4Q8NEY3 305 aa12.82□□□□□ -0.36
UBE2D3-209ENST00000394804 BZW2Q9Y6E2 419 aaKnown RBP12.82□□□□□ -0.36
UBE2D3-209ENST00000394804 TNS2Q63HR2 1409 aa12.82□□□□□ -0.36
UBE2D3-209ENST00000394804 EXOC3L4Q17RC7 722 aa12.82□□□□□ -0.36
UBE2D3-209ENST00000394804 SLFN12Q8IYM2 578 aa12.82□□□□□ -0.36
UBE2D3-209ENST00000394804 SELENOSQ9BQE4 189 aa12.82□□□□□ -0.36
UBE2D3-209ENST00000394804 MTRF1LQ9UGC7 380 aaKnown RBP12.82□□□□□ -0.36
UBE2D3-209ENST00000394804 PCDHB13Q9Y5F0 798 aa12.82□□□□□ -0.36
UBE2D3-209ENST00000394804 LRRC10BA6NIK2 292 aa12.82□□□□□ -0.36
UBE2D3-209ENST00000394804 E7EVH7 732 aa12.82□□□□□ -0.36
UBE2D3-209ENST00000394804 CTNNA1P35221 906 aaKnown RBP12.82□□□□□ -0.36
UBE2D3-209ENST00000394804 TBC1D9BQ66K14 1250 aa12.82□□□□□ -0.36
UBE2D3-209ENST00000394804 DAAM2Q86T65 1068 aa12.82□□□□□ -0.36
UBE2D3-209ENST00000394804 RNF10Q8N5U6 811 aaKnown RBP12.82□□□□□ -0.36
UBE2D3-209ENST00000394804 TRIM31Q9BZY9 425 aa12.82□□□□□ -0.36
UBE2D3-209ENST00000394804 METTL14Q9HCE5 456 aaKnown RBP12.82□□□□□ -0.36
UBE2D3-209ENST00000394804 CEP72Q9P209 647 aa12.82□□□□□ -0.36
UBE2D3-209ENST00000394804 STXBP3O00186 592 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 KRIT1O00522 736 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 CETN2P41208 172 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 STAT1P42224 750 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 INTS5Q6P9B9 1019 aaKnown RBP12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 CCNI2Q6ZMN8 369 aaPredicted RBP12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 FAM133AQ8N9E0 248 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 U2AF1L4Q8WU68 220 aaKnown RBP12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 EDEM3Q9BZQ6 932 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 STMN4Q9H169 189 aaPredicted RBP12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 HPCAL4Q9UM19 191 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 TFR2Q9UP52 801 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 TMEM110-MUSTN1A8MSY1 372 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 APBA3O96018 575 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 IBSPP21815 317 aaPredicted RBP12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 E2F4Q16254 413 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 KRT71Q3SY84 523 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 TTI2Q6NXR4 508 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 ANKS4BQ8N8V4 417 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 RAD54LQ92698 747 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 HPS3Q969F9 1004 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 ERGIC2Q96RQ1 377 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 NSRP1Q9H0G5 558 aaKnown RBP12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 AMFRQ9UKV5 643 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 GSTTP1A0A1W2PQM5 241 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 TTLL1O95922 423 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 SSR1P43307 286 aaKnown RBP12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 GRAPQ13588 217 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 PTPROQ16827 1216 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 NEDD1Q8NHV4 660 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 GRAPLQ8TC17 118 aaPredicted RBP12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 USP40Q9NVE5 1235 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 KBTBD4Q9NVX7 518 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 ADAMTS1Q9UHI8 967 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.81□□□□□ -0.361e-8■□□□□ 9.1
UBE2D3-209ENST00000394804 A0A1W2PQJ5 194 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 ANKRD65E5RJM6 399 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 HMGB2P26583 209 aaKnown RBP12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 CACNB1Q02641 598 aaPredicted RBP12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 GFPT1Q06210 699 aaPredicted RBP12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 NNTQ13423 1086 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 UBE2SQ16763 222 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 PRR16Q569H4 304 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 WHAMMQ8TF30 809 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 RUBCNQ92622 972 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 CEP95Q96GE4 821 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 EMILIN3Q9NT22 766 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 TMEM260Q9NX78 707 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 NARFQ9UHQ1 456 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 NFU1Q9UMS0 254 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 SAMM50Q9Y512 469 aa12.81□□□□□ -0.36
UBE2D3-209ENST00000394804 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.8□□□□□ -0.36
UBE2D3-209ENST00000394804 SMIM23A6NLE4 172 aa12.8□□□□□ -0.36
UBE2D3-209ENST00000394804 MAP2K7O14733 419 aa12.8□□□□□ -0.36
UBE2D3-209ENST00000394804 DAGLBQ8NCG7 672 aa12.8□□□□□ -0.36
UBE2D3-209ENST00000394804 SH2D4AQ9H788 454 aa12.8□□□□□ -0.36
UBE2D3-209ENST00000394804 PPANQ9NQ55 473 aaKnown RBP12.8□□□□□ -0.36
UBE2D3-209ENST00000394804 PCDHA1Q9Y5I3 950 aa12.8□□□□□ -0.36
UBE2D3-209ENST00000394804 BCL9O00512 1426 aa12.8□□□□□ -0.36
UBE2D3-209ENST00000394804 ARFGEF2Q9Y6D5 1785 aa12.8□□□□□ -0.36
UBE2D3-209ENST00000394804 USP17L5A8MUK1 530 aa12.8□□□□□ -0.36
UBE2D3-209ENST00000394804 PLA2G4BP0C869 781 aa12.8□□□□□ -0.36
UBE2D3-209ENST00000394804 POTEJP0CG39 1038 aa12.8□□□□□ -0.36
UBE2D3-209ENST00000394804 KLK7P49862 253 aa12.8□□□□□ -0.36
UBE2D3-209ENST00000394804 ITPK1Q13572 414 aa12.8□□□□□ -0.36
UBE2D3-209ENST00000394804 PAPD7Q5XG87 772 aaKnown RBP12.8□□□□□ -0.36
UBE2D3-209ENST00000394804 MCTP2Q6DN12 878 aa12.8□□□□□ -0.36
UBE2D3-209ENST00000394804 HOOK3Q86VS8 718 aa12.8□□□□□ -0.36
UBE2D3-209ENST00000394804 CABS1Q96KC9 395 aa12.8□□□□□ -0.36
UBE2D3-209ENST00000394804 LRRC1Q9BTT6 524 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 1153.6 ms