RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 SNX2O60749 519 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 TSPY1Q01534 308 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 ART3Q13508 389 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 KRT80Q6KB66 452 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 TEKT4Q8WW24 435 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 TADA1Q96BN2 335 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 DHX36Q9H2U1 1008 aaKnown RBP8.03□□□□□ -1.12
SYNE2-205ENST00000394768 ABT1Q9ULW3 272 aaKnown RBP8.03□□□□□ -1.12
SYNE2-205ENST00000394768 ERBB4Q15303 1308 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 GTPBP10A4D1E9 387 aaKnown RBP8.03□□□□□ -1.12
SYNE2-205ENST00000394768 TTLL1O95922 423 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 LRRC8BQ6P9F7 803 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 FAM207AQ9NSI2 230 aaPredicted RBP8.03□□□□□ -1.12
SYNE2-205ENST00000394768 NEMP1O14524 444 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 EEF1DP29692 281 aaKnown RBP8.03□□□□□ -1.12
SYNE2-205ENST00000394768 TNFAIP2Q03169 654 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 SLMAPQ14BN4 828 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 KCTD6Q8NC69 237 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 ACAP3Q96P50 834 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 FSD1LQ9BXM9 530 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 H3BRJ5 948 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 PSMC2P35998 433 aaKnown RBP8.03□□□□□ -1.12
SYNE2-205ENST00000394768 EIF4A2Q14240 407 aaKnown RBP8.03□□□□□ -1.12
SYNE2-205ENST00000394768 ARHGEF25Q86VW2 580 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 PLA2G4DQ86XP0 818 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 TRIM59Q8IWR1 403 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 PHF21AQ96BD5 680 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 MPP6Q9NZW5 540 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 AP3B1O00203 1094 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 LDHAP00338 332 aaKnown RBP8.03□□□□□ -1.12
SYNE2-205ENST00000394768 RPS8P62241 208 aaKnown RBP8.03□□□□□ -1.12
SYNE2-205ENST00000394768 TFAP4Q01664 338 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 FAM89AQ96GI7 184 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 PPP1R2P1Q96PQ5 205 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 TBC1D7Q9P0N9 293 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 KIF24Q5T7B8 1368 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 LRRIQ3A6PVS8 624 aaPredicted RBP8.03□□□□□ -1.12
SYNE2-205ENST00000394768 CTSWP56202 376 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 EXOC3L4Q17RC7 722 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 EHD2Q9NZN4 543 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 RXRAP19793 462 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 ABCB4P21439 1286 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 RC3H1Q5TC82 1133 aaKnown RBP8.03□□□□□ -1.12
SYNE2-205ENST00000394768 MCUQ8NE86 351 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 ACCSQ96QU6 501 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 SLC52A2Q9HAB3 445 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 LAMB3Q13751 1172 aa8.02□□□□□ -1.12
SYNE2-205ENST00000394768 ANGPTL8Q6UXH0 198 aa8.02□□□□□ -1.12
SYNE2-205ENST00000394768 ATP6V0A4Q9HBG4 840 aa8.02□□□□□ -1.12
SYNE2-205ENST00000394768 RASSF10A6NK89 507 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 PPP1R12AO14974 1030 aaPredicted RBP8.02□□□□□ -1.13
SYNE2-205ENST00000394768 PSAPP07602 524 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 EEF1B2P24534 225 aaKnown RBP8.02□□□□□ -1.13
SYNE2-205ENST00000394768 HP1BP3Q5SSJ5 553 aaPredicted RBP8.02□□□□□ -1.13
SYNE2-205ENST00000394768 ZNF274Q96GC6 653 aaPredicted RBP8.02□□□□□ -1.13
SYNE2-205ENST00000394768 ABHD8Q96I13 439 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 NR1H3Q13133 447 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 COA7Q96BR5 231 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 ZSCAN32Q9NX65 697 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 KIF17Q9P2E2 1029 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 SUGT1Q9Y2Z0 365 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 SLC27A2O14975 620 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 BAG2O95816 211 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 OCRLQ01968 901 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 DYMQ7RTS9 669 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 MAPKAPK5Q8IW41 473 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 MYCBPQ99417 103 aaPredicted RBP8.02□□□□□ -1.13
SYNE2-205ENST00000394768 YY1AP1Q9H869 796 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 INO80B-WBP1J3KQ70 363 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 SKOR1P84550 965 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 YWHAHQ04917 246 aaPredicted RBP8.02□□□□□ -1.13
SYNE2-205ENST00000394768 DNAJC24Q6P3W2 148 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 TRIM67Q6ZTA4 783 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 CCNYQ8ND76 341 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 NAF1Q96HR8 494 aaKnown RBP8.02□□□□□ -1.13
SYNE2-205ENST00000394768 TCEANC2Q96MN5 208 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 FBXO40Q9UH90 709 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 ARHGEF9O43307 516 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 SMARCA1P28370 1054 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 MORC3Q14149 939 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 NOSTRINQ8IVI9 506 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 RPRD1BQ9NQG5 326 aaKnown RBP8.02□□□□□ -1.13
SYNE2-205ENST00000394768 STRIP2Q9ULQ0 834 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 LEMD3Q9Y2U8 911 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 RIPOR2Q9Y4F9 1068 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 ESRRBO95718 433 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 EIF3BP55884 814 aaKnown RBP8.02□□□□□ -1.13
SYNE2-205ENST00000394768 MGARPQ8TDB4 240 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 FAM129AQ9BZQ8 928 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 COG4Q9H9E3 785 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 STK38LQ9Y2H1 464 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 ZNF532Q9HCE3 1301 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 KRT16P08779 473 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 H2AFZP0C0S5 128 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 RNASE9P60153 205 aaKnown RBP8.02□□□□□ -1.13
SYNE2-205ENST00000394768 ADAM9Q13443 819 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 H2AFVQ71UI9 128 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 KLC2Q9H0B6 622 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 SYTL2Q9HCH5 934 aa8.02□□□□□ -1.13
SYNE2-205ENST00000394768 ARHGAP26Q9UNA1 814 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms