RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 KRT40Q6A162 431 aa13.69□□□□□ -0.22
SLC28A1-203ENST00000394573 CACNA2D4Q7Z3S7 1137 aa13.69□□□□□ -0.22
SLC28A1-203ENST00000394573 SMYD1Q8NB12 490 aa13.69□□□□□ -0.22
SLC28A1-203ENST00000394573 MGARPQ8TDB4 240 aa13.69□□□□□ -0.22
SLC28A1-203ENST00000394573 TMEM237Q96Q45 408 aa13.69□□□□□ -0.22
SLC28A1-203ENST00000394573 CCDC113Q9H0I3 377 aa13.69□□□□□ -0.22
SLC28A1-203ENST00000394573 SALL4Q9UJQ4 1053 aa13.69□□□□□ -0.22
SLC28A1-203ENST00000394573 ENTPD5O75356 428 aa13.69□□□□□ -0.22
SLC28A1-203ENST00000394573 IARSP41252 1262 aaKnown RBP13.69□□□□□ -0.22
SLC28A1-203ENST00000394573 LRRC14Q15048 493 aa13.69□□□□□ -0.22
SLC28A1-203ENST00000394573 IMMTQ16891 758 aaKnown RBP13.69□□□□□ -0.22
SLC28A1-203ENST00000394573 NT5DC1Q5TFE4 455 aa13.69□□□□□ -0.22
SLC28A1-203ENST00000394573 TMC4Q7Z404 712 aa13.69□□□□□ -0.22
SLC28A1-203ENST00000394573 STK32AQ8WU08 396 aa13.69□□□□□ -0.22
SLC28A1-203ENST00000394573 RUBCNQ92622 972 aa13.69□□□□□ -0.22
SLC28A1-203ENST00000394573 FAM136AQ96C01 138 aa13.69□□□□□ -0.22
SLC28A1-203ENST00000394573 ZNF274Q96GC6 653 aaPredicted RBP13.69□□□□□ -0.22
SLC28A1-203ENST00000394573 SRPK1Q96SB4 655 aaKnown RBP13.69□□□□□ -0.22
SLC28A1-203ENST00000394573 BLZF1Q9H2G9 400 aa13.69□□□□□ -0.22
SLC28A1-203ENST00000394573 NMRK1Q9NWW6 199 aa13.69□□□□□ -0.22
SLC28A1-203ENST00000394573 TDRKHQ9Y2W6 561 aaKnown RBP13.69□□□□□ -0.22
SLC28A1-203ENST00000394573 ZNF609O15014 1411 aa13.69□□□□□ -0.22
SLC28A1-203ENST00000394573 MAP2P11137 1827 aaKnown RBP13.68□□□□□ -0.22
SLC28A1-203ENST00000394573 PPP1R3GB7ZBB8 358 aa13.68□□□□□ -0.22
SLC28A1-203ENST00000394573 CEP104O60308 925 aa13.68□□□□□ -0.22
SLC28A1-203ENST00000394573 PYGMP11217 842 aa13.68□□□□□ -0.22
SLC28A1-203ENST00000394573 TCP1P17987 556 aaKnown RBP13.68□□□□□ -0.22
SLC28A1-203ENST00000394573 CLCN2P51788 898 aa13.68□□□□□ -0.22
SLC28A1-203ENST00000394573 FITM2Q8N6M3 262 aa13.68□□□□□ -0.22
SLC28A1-203ENST00000394573 PTPRN2Q92932 1015 aa13.68□□□□□ -0.22
SLC28A1-203ENST00000394573 PCMTD1Q96MG8 357 aaPredicted RBP13.68□□□□□ -0.22
SLC28A1-203ENST00000394573 MLXIPLQ9NP71 852 aa13.68□□□□□ -0.22
SLC28A1-203ENST00000394573 CWC25Q9NXE8 425 aaPredicted RBP13.68□□□□□ -0.22
SLC28A1-203ENST00000394573 UBAP1Q9NZ09 502 aa13.68□□□□□ -0.22
SLC28A1-203ENST00000394573 HSFX1Q9UBD0 423 aa13.68□□□□□ -0.22
SLC28A1-203ENST00000394573 DAAM1Q9Y4D1 1078 aa13.68□□□□□ -0.22
SLC28A1-203ENST00000394573 FAM237AA0A1B0GTK4 181 aa13.68□□□□□ -0.22
SLC28A1-203ENST00000394573 A6NJR5 290 aa13.68□□□□□ -0.22
SLC28A1-203ENST00000394573 ASAP2O43150 1006 aa13.68□□□□□ -0.22
SLC28A1-203ENST00000394573 SART1O43290 800 aaKnown RBP13.68□□□□□ -0.22
SLC28A1-203ENST00000394573 ACADSP16219 412 aa13.68□□□□□ -0.22
SLC28A1-203ENST00000394573 BNIP1Q12981 228 aa13.68□□□□□ -0.22
SLC28A1-203ENST00000394573 CCDC80Q76M96 950 aa13.68□□□□□ -0.22
SLC28A1-203ENST00000394573 RIC3Q7Z5B4 369 aa13.68□□□□□ -0.22
SLC28A1-203ENST00000394573 ATP11CQ8NB49 1132 aa13.68□□□□□ -0.22
SLC28A1-203ENST00000394573 C1orf131Q8NDD1 294 aaKnown RBP13.68□□□□□ -0.22
SLC28A1-203ENST00000394573 CLIP3Q96DZ5 547 aa13.68□□□□□ -0.22
SLC28A1-203ENST00000394573 DYDC2Q96IM9 177 aa13.68□□□□□ -0.22
SLC28A1-203ENST00000394573 FGFR1OP2Q9NVK5 253 aa13.68□□□□□ -0.22
SLC28A1-203ENST00000394573 CRB1P82279 1406 aa13.68□□□□□ -0.22
SLC28A1-203ENST00000394573 PI4KAP2A4QPH2 592 aa13.67□□□□□ -0.22
SLC28A1-203ENST00000394573 ACTN4O43707 911 aaKnown RBP13.67□□□□□ -0.22
SLC28A1-203ENST00000394573 CFAP221Q4G0U5 840 aa13.67□□□□□ -0.22
SLC28A1-203ENST00000394573 RRAGBQ5VZM2 374 aa13.67□□□□□ -0.22
SLC28A1-203ENST00000394573 IRGCQ6NXR0 463 aa13.67□□□□□ -0.22
SLC28A1-203ENST00000394573 APLFQ8IW19 511 aaPredicted RBP13.67□□□□□ -0.22
SLC28A1-203ENST00000394573 PI4KAP1Q8N8J0 262 aa13.67□□□□□ -0.22
SLC28A1-203ENST00000394573 UHMK1Q8TAS1 419 aaKnown RBP13.67□□□□□ -0.22
SLC28A1-203ENST00000394573 RNF25Q96BH1 459 aaPredicted RBP13.67□□□□□ -0.22
SLC28A1-203ENST00000394573 IFT74Q96LB3 600 aa13.67□□□□□ -0.22
SLC28A1-203ENST00000394573 TLR10Q9BXR5 811 aa13.67□□□□□ -0.22
SLC28A1-203ENST00000394573 IFIH1Q9BYX4 1025 aaKnown RBP13.67□□□□□ -0.22
SLC28A1-203ENST00000394573 WDR37Q9Y2I8 494 aa13.67□□□□□ -0.22
SLC28A1-203ENST00000394573 USP20Q9Y2K6 914 aa13.67□□□□□ -0.22
SLC28A1-203ENST00000394573 PCDH11XQ9BZA7 1347 aa13.67□□□□□ -0.22
SLC28A1-203ENST00000394573 A0A087X0B3 334 aa13.67□□□□□ -0.22
SLC28A1-203ENST00000394573 FTCDO95954 541 aa13.67□□□□□ -0.22
SLC28A1-203ENST00000394573 TRIM21P19474 475 aaKnown RBP13.67□□□□□ -0.22
SLC28A1-203ENST00000394573 VARSP26640 1264 aaKnown RBP13.67□□□□□ -0.22
SLC28A1-203ENST00000394573 MLH1P40692 756 aa13.67□□□□□ -0.22
SLC28A1-203ENST00000394573 ITIH3Q06033 890 aa13.67□□□□□ -0.22
SLC28A1-203ENST00000394573 SPA17Q15506 151 aa13.67□□□□□ -0.22
SLC28A1-203ENST00000394573 MAP7D1Q3KQU3 841 aa13.67□□□□□ -0.22
SLC28A1-203ENST00000394573 TCP11X2Q5H9J9 407 aa13.67□□□□□ -0.22
SLC28A1-203ENST00000394573 TYW1BQ6NUM6 668 aa13.67□□□□□ -0.22
SLC28A1-203ENST00000394573 ZNF572Q7Z3I7 529 aaPredicted RBP13.67□□□□□ -0.22
SLC28A1-203ENST00000394573 ASAP3Q8TDY4 903 aa13.67□□□□□ -0.22
SLC28A1-203ENST00000394573 PIGOQ8TEQ8 1089 aa13.67□□□□□ -0.22
SLC28A1-203ENST00000394573 ATXN2LQ8WWM7 1075 aaKnown RBP13.67□□□□□ -0.22
SLC28A1-203ENST00000394573 PBKQ96KB5 322 aa13.67□□□□□ -0.22
SLC28A1-203ENST00000394573 PURBQ96QR8 312 aaKnown RBP13.67□□□□□ -0.22
SLC28A1-203ENST00000394573 DNAJC7Q99615 494 aa13.67□□□□□ -0.22
SLC28A1-203ENST00000394573 CENPOQ9BU64 300 aa13.67□□□□□ -0.22
SLC28A1-203ENST00000394573 F8VZ95 297 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 NVLO15381 856 aaKnown RBP13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 GNAT2P19087 354 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 HOXD12P35452 270 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 C16orf87Q6PH81 154 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 LRIG3Q6UXM1 1119 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 ARHGAP27Q6ZUM4 889 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 FAM133AQ8N9E0 248 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 WDR60Q8WVS4 1066 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 UBAC1Q9BSL1 405 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 INTS9Q9NV88 658 aaKnown RBP13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 CYP39A1Q9NYL5 469 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 HPS5Q9UPZ3 1129 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 MYH1P12882 1939 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 A0A0J9YVX5 310 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 TRIM49BA6NDI0 452 aa13.66□□□□□ -0.22
SLC28A1-203ENST00000394573 SNX3O60493 162 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms