RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 BMP3P12645 472 aa16.32■□□□□ 0.2
CDH16-202ENST00000394055 HERVK_113P62684 666 aa16.32■□□□□ 0.2
CDH16-202ENST00000394055 EN1Q05925 392 aaPredicted RBP16.32■□□□□ 0.2
CDH16-202ENST00000394055 CC2D2BQ6DHV5 1058 aa16.32■□□□□ 0.2
CDH16-202ENST00000394055 NELFCDQ8IXH7 590 aa16.32■□□□□ 0.2
CDH16-202ENST00000394055 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.32■□□□□ 0.2
CDH16-202ENST00000394055 MEIS1O00470 390 aa16.32■□□□□ 0.2
CDH16-202ENST00000394055 EPHB6O15197 1021 aa16.32■□□□□ 0.2
CDH16-202ENST00000394055 MED24O75448 989 aa16.32■□□□□ 0.2
CDH16-202ENST00000394055 SEC31AO94979 1220 aaKnown RBP16.32■□□□□ 0.2
CDH16-202ENST00000394055 PLA2G4BP0C869 781 aa16.32■□□□□ 0.2
CDH16-202ENST00000394055 EHHADHQ08426 723 aa16.32■□□□□ 0.2
CDH16-202ENST00000394055 SLC15A2Q16348 729 aa16.32■□□□□ 0.2
CDH16-202ENST00000394055 VWA3BQ502W6 1294 aa16.32■□□□□ 0.2
CDH16-202ENST00000394055 NCAPH2Q6IBW4 605 aa16.32■□□□□ 0.2
CDH16-202ENST00000394055 GPBP1Q86WP2 473 aa16.32■□□□□ 0.2
CDH16-202ENST00000394055 DHX37Q8IY37 1157 aaKnown RBP16.32■□□□□ 0.2
CDH16-202ENST00000394055 NDST4Q9H3R1 872 aa16.32■□□□□ 0.2
CDH16-202ENST00000394055 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.32■□□□□ 0.2
CDH16-202ENST00000394055 ZNF646O15015 1829 aaPredicted RBP16.32■□□□□ 0.2
CDH16-202ENST00000394055 KDM3AQ9Y4C1 1321 aa16.32■□□□□ 0.2
CDH16-202ENST00000394055 RXRBP28702 533 aa16.32■□□□□ 0.2
CDH16-202ENST00000394055 USP11P51784 963 aa16.32■□□□□ 0.2
CDH16-202ENST00000394055 FAM26FQ5R3K3 315 aa16.32■□□□□ 0.2
CDH16-202ENST00000394055 MYOCDQ8IZQ8 938 aa16.32■□□□□ 0.2
CDH16-202ENST00000394055 CCDC155Q8N6L0 562 aa16.32■□□□□ 0.2
CDH16-202ENST00000394055 GMCL1P1Q8NEA9 526 aa16.32■□□□□ 0.2
CDH16-202ENST00000394055 GMCL1Q96IK5 515 aa16.32■□□□□ 0.2
CDH16-202ENST00000394055 LRRC27Q9C0I9 530 aa16.32■□□□□ 0.2
CDH16-202ENST00000394055 GLT8D2Q9H1C3 349 aa16.32■□□□□ 0.2
CDH16-202ENST00000394055 MMRN2Q9H8L6 949 aa16.32■□□□□ 0.2
CDH16-202ENST00000394055 ZNHIT6Q9NWK9 470 aaKnown RBP16.32■□□□□ 0.2
CDH16-202ENST00000394055 ZBTB12Q9Y330 459 aaPredicted RBP16.32■□□□□ 0.2
CDH16-202ENST00000394055 SPDYE3A6NKU9 549 aa16.31■□□□□ 0.2
CDH16-202ENST00000394055 ENTPD3O75355 529 aa16.31■□□□□ 0.2
CDH16-202ENST00000394055 ZBED6P86452 979 aa16.31■□□□□ 0.2
CDH16-202ENST00000394055 LRRC55Q6ZSA7 311 aa16.31■□□□□ 0.2
CDH16-202ENST00000394055 RSRC2Q7L4I2 434 aaKnown RBP16.31■□□□□ 0.2
CDH16-202ENST00000394055 ACER1Q8TDN7 264 aa16.31■□□□□ 0.2
CDH16-202ENST00000394055 NAPGQ99747 312 aaPredicted RBP16.31■□□□□ 0.2
CDH16-202ENST00000394055 NUP58Q9BVL2 599 aa16.31■□□□□ 0.2
CDH16-202ENST00000394055 NT5C3AQ9H0P0 336 aa16.31■□□□□ 0.2
CDH16-202ENST00000394055 BMP2KQ9NSY1 1161 aaPredicted RBP16.31■□□□□ 0.2
CDH16-202ENST00000394055 CDC23Q9UJX2 597 aa16.31■□□□□ 0.2
CDH16-202ENST00000394055 FAM86B1E9PN63 330 aa16.31■□□□□ 0.2
CDH16-202ENST00000394055 NPM3O75607 178 aaKnown RBP16.31■□□□□ 0.2
CDH16-202ENST00000394055 KRT18P05783 430 aaKnown RBP16.31■□□□□ 0.2
CDH16-202ENST00000394055 FAM86B2P0C5J1 330 aa16.31■□□□□ 0.2
CDH16-202ENST00000394055 CYP27A1Q02318 531 aa16.31■□□□□ 0.2
CDH16-202ENST00000394055 GABPB1Q06547 395 aaPredicted RBP16.31■□□□□ 0.2
CDH16-202ENST00000394055 KIAA1755Q5JYT7 1200 aa16.31■□□□□ 0.2
CDH16-202ENST00000394055 KIAA1328Q86T90 577 aa16.31■□□□□ 0.2
CDH16-202ENST00000394055 CDAN1Q8IWY9 1227 aa16.31■□□□□ 0.2
CDH16-202ENST00000394055 CYP2W1Q8TAV3 490 aa16.31■□□□□ 0.2
CDH16-202ENST00000394055 GOLGA1Q92805 767 aa16.31■□□□□ 0.2
CDH16-202ENST00000394055 ERGIC2Q96RQ1 377 aa16.31■□□□□ 0.2
CDH16-202ENST00000394055 NAP1L4Q99733 375 aaKnown RBP16.31■□□□□ 0.2
CDH16-202ENST00000394055 TANGO6Q9C0B7 1094 aa16.31■□□□□ 0.2
CDH16-202ENST00000394055 NHEJ1Q9H9Q4 299 aaPredicted RBP16.31■□□□□ 0.2
CDH16-202ENST00000394055 PLEKP08567 350 aaPredicted RBP16.3■□□□□ 0.2
CDH16-202ENST00000394055 CHMP4BP1P59074 171 aa16.3■□□□□ 0.2
CDH16-202ENST00000394055 LRRC63Q05C16 580 aa16.3■□□□□ 0.2
CDH16-202ENST00000394055 AP3B2Q13367 1082 aa16.3■□□□□ 0.2
CDH16-202ENST00000394055 ZYXQ15942 572 aaKnown RBP16.3■□□□□ 0.2
CDH16-202ENST00000394055 MEA1Q16626 185 aa16.3■□□□□ 0.2
CDH16-202ENST00000394055 CCDC122Q5T0U0 273 aa16.3■□□□□ 0.2
CDH16-202ENST00000394055 SLC30A10Q6XR72 485 aa16.3■□□□□ 0.2
CDH16-202ENST00000394055 TSG101Q99816 390 aa16.3■□□□□ 0.2
CDH16-202ENST00000394055 ARGLU1Q9NWB6 273 aaPredicted RBP16.3■□□□□ 0.2
CDH16-202ENST00000394055 PRR12Q9ULL5 1215 aa16.3■□□□□ 0.2
CDH16-202ENST00000394055 ATRNL1Q5VV63 1379 aa16.3■□□□□ 0.2
CDH16-202ENST00000394055 SMCHD1A6NHR9 2005 aa16.3■□□□□ 0.2
CDH16-202ENST00000394055 TRAF5O00463 557 aa16.3■□□□□ 0.2
CDH16-202ENST00000394055 ENC1O14682 589 aa16.3■□□□□ 0.2
CDH16-202ENST00000394055 OPLAHO14841 1288 aa16.3■□□□□ 0.2
CDH16-202ENST00000394055 PSMC6P62333 389 aa16.3■□□□□ 0.2
CDH16-202ENST00000394055 MAN2A1Q16706 1144 aa16.3■□□□□ 0.2
CDH16-202ENST00000394055 HERC4Q5GLZ8 1057 aaPredicted RBP16.3■□□□□ 0.2
CDH16-202ENST00000394055 TMCO3Q6UWJ1 677 aa16.3■□□□□ 0.2
CDH16-202ENST00000394055 RETREG2Q8NC44 543 aa16.3■□□□□ 0.2
CDH16-202ENST00000394055 ETNPPLQ8TBG4 499 aa16.3■□□□□ 0.2
CDH16-202ENST00000394055 TMOD2Q9NZR1 351 aa16.3■□□□□ 0.2
CDH16-202ENST00000394055 CYP3A7-CYP3A51PA0A087WV96 503 aa16.29■□□□□ 0.2
CDH16-202ENST00000394055 CYP11B2P19099 503 aa16.29■□□□□ 0.2
CDH16-202ENST00000394055 CYP3A7P24462 503 aa16.29■□□□□ 0.2
CDH16-202ENST00000394055 PSMD2Q13200 908 aa16.29■□□□□ 0.2
CDH16-202ENST00000394055 HYIQ5T013 277 aa16.29■□□□□ 0.2
CDH16-202ENST00000394055 SRGAP1Q7Z6B7 1085 aa16.29■□□□□ 0.2
CDH16-202ENST00000394055 CRYGNQ8WXF5 182 aa16.29■□□□□ 0.2
CDH16-202ENST00000394055 VEZTQ9HBM0 779 aa16.29■□□□□ 0.2
CDH16-202ENST00000394055 ZNF277Q9NRM2 450 aaPredicted RBP16.29■□□□□ 0.2
CDH16-202ENST00000394055 RCCD1A6NED2 376 aa16.29■□□□□ 0.2
CDH16-202ENST00000394055 CYP4A11Q02928 519 aa16.29■□□□□ 0.2
CDH16-202ENST00000394055 PABPC4Q13310 644 aaKnown RBP eCLIP16.29■□□□□ 0.2
CDH16-202ENST00000394055 CATSPER3Q86XQ3 398 aa16.29■□□□□ 0.2
CDH16-202ENST00000394055 SLFN12Q8IYM2 578 aa16.29■□□□□ 0.2
CDH16-202ENST00000394055 SMCR8Q8TEV9 937 aaPredicted RBP16.29■□□□□ 0.2
CDH16-202ENST00000394055 LENG9Q96B70 501 aa16.29■□□□□ 0.2
CDH16-202ENST00000394055 PARD6BQ9BYG5 372 aa16.29■□□□□ 0.2
CDH16-202ENST00000394055 LACRTQ9GZZ8 138 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms