RNA–Protein interactions for RNA: ENST00000393820.2

NPM1-203, Transcript of nucleophosmin 1, humanhuman

TSL 1 (best) BASIC

Gene NPM1, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-203ENST00000393820 KIF3AQ9Y496 699 aa6.52□□□□□ -1.36
NPM1-203ENST00000393820 RPAP1Q9BWH6 1393 aaPredicted RBP6.52□□□□□ -1.37
NPM1-203ENST00000393820 USP42Q9H9J4 1324 aaKnown RBP6.52□□□□□ -1.37
NPM1-203ENST00000393820 A0A0G2JLW4 131 aa6.52□□□□□ -1.37
NPM1-203ENST00000393820 UPK3BL1B0FP48 263 aa6.52□□□□□ -1.37
NPM1-203ENST00000393820 UPK3BL2E5RIL1 263 aa6.52□□□□□ -1.37
NPM1-203ENST00000393820 DDX3YO15523 660 aaKnown RBP6.52□□□□□ -1.37
NPM1-203ENST00000393820 STX6O43752 255 aa6.52□□□□□ -1.37
NPM1-203ENST00000393820 DDAH1O94760 285 aa6.52□□□□□ -1.37
NPM1-203ENST00000393820 SELPP16109 830 aa6.52□□□□□ -1.37
NPM1-203ENST00000393820 SETDB1Q15047 1291 aa6.52□□□□□ -1.37
NPM1-203ENST00000393820 KRT24Q2M2I5 525 aa6.52□□□□□ -1.37
NPM1-203ENST00000393820 HSP90AB4PQ58FF6 505 aa6.52□□□□□ -1.37
NPM1-203ENST00000393820 AKAP4Q5JQC9 854 aa6.52□□□□□ -1.37
NPM1-203ENST00000393820 CCDC181Q5TID7 509 aa6.52□□□□□ -1.37
NPM1-203ENST00000393820 ARHGAP27Q6ZUM4 889 aa6.52□□□□□ -1.37
NPM1-203ENST00000393820 TTC14Q96N46 770 aa6.52□□□□□ -1.37
NPM1-203ENST00000393820 TM9SF2Q99805 663 aa6.52□□□□□ -1.37
NPM1-203ENST00000393820 FUCA2Q9BTY2 467 aa6.52□□□□□ -1.37
NPM1-203ENST00000393820 EMILIN2Q9BXX0 1053 aa6.52□□□□□ -1.37
NPM1-203ENST00000393820 GTPBP4Q9BZE4 634 aaKnown RBP6.52□□□□□ -1.37
NPM1-203ENST00000393820 TM6SF1Q9BZW5 370 aa6.52□□□□□ -1.37
NPM1-203ENST00000393820 TYW1Q9NV66 732 aaKnown RBP6.52□□□□□ -1.37
NPM1-203ENST00000393820 CACNA2D2Q9NY47 1150 aa6.52□□□□□ -1.37
NPM1-203ENST00000393820 EXOC6BQ9Y2D4 811 aa6.52□□□□□ -1.37
NPM1-203ENST00000393820 KDM6AO15550 1401 aaPredicted RBP6.51□□□□□ -1.37
NPM1-203ENST00000393820 C4AP0C0L4 1744 aa6.51□□□□□ -1.37
NPM1-203ENST00000393820 COL5A3P25940 1745 aaPredicted RBP6.51□□□□□ -1.37
NPM1-203ENST00000393820 FSCN2O14926 492 aa6.51□□□□□ -1.37
NPM1-203ENST00000393820 SGSM2O43147 1006 aa6.51□□□□□ -1.37
NPM1-203ENST00000393820 ESRRAP11474 423 aaPredicted RBP6.51□□□□□ -1.37
NPM1-203ENST00000393820 DPEP1P16444 411 aa6.51□□□□□ -1.37
NPM1-203ENST00000393820 SYT1P21579 422 aa6.51□□□□□ -1.37
NPM1-203ENST00000393820 KCNA3P22001 575 aa6.51□□□□□ -1.37
NPM1-203ENST00000393820 GUCY2CP25092 1073 aa6.51□□□□□ -1.37
NPM1-203ENST00000393820 TM4SF1P30408 202 aa6.51□□□□□ -1.37
NPM1-203ENST00000393820 CRKLP46109 303 aaKnown RBP6.51□□□□□ -1.37
NPM1-203ENST00000393820 SSRP1Q08945 709 aaKnown RBP6.51□□□□□ -1.37
NPM1-203ENST00000393820 CHAF1AQ13111 956 aaPredicted RBP6.51□□□□□ -1.37
NPM1-203ENST00000393820 SYCP1Q15431 976 aa6.51□□□□□ -1.37
NPM1-203ENST00000393820 TCEA2Q15560 299 aa6.51□□□□□ -1.37
NPM1-203ENST00000393820 SHISA2Q6UWI4 295 aa6.51□□□□□ -1.37
NPM1-203ENST00000393820 G2E3Q7L622 706 aa6.51□□□□□ -1.37
NPM1-203ENST00000393820 FAM178BQ8IXR5 827 aa6.51□□□□□ -1.37
NPM1-203ENST00000393820 CNTROBQ8N137 903 aa6.51□□□□□ -1.37
NPM1-203ENST00000393820 SYNPOQ8N3V7 929 aa6.51□□□□□ -1.37
NPM1-203ENST00000393820 KIAA1524Q8TCG1 905 aa6.51□□□□□ -1.37
NPM1-203ENST00000393820 ZNF526Q8TF50 670 aaPredicted RBP6.51□□□□□ -1.37
NPM1-203ENST00000393820 RUFY2Q8WXA3 655 aa6.51□□□□□ -1.37
NPM1-203ENST00000393820 KIF1BPQ96EK5 621 aa6.51□□□□□ -1.37
NPM1-203ENST00000393820 KLHDC7BQ96G42 594 aa6.51□□□□□ -1.37
NPM1-203ENST00000393820 TEX13AQ9BXU3 409 aaPredicted RBP6.51□□□□□ -1.37
NPM1-203ENST00000393820 RAD50Q92878 1312 aa6.5□□□□□ -1.37
NPM1-203ENST00000393820 DLG5Q8TDM6 1919 aa6.5□□□□□ -1.37
NPM1-203ENST00000393820 PNMA6EA0A0J9YXQ4 647 aa6.5□□□□□ -1.37
NPM1-203ENST00000393820 FAM177BA6PVY3 158 aa6.5□□□□□ -1.37
NPM1-203ENST00000393820 H3BRJ5 948 aa6.5□□□□□ -1.37
NPM1-203ENST00000393820 TM4SF5O14894 197 aa6.5□□□□□ -1.37
NPM1-203ENST00000393820 CCDC192P0DO97 292 aa6.5□□□□□ -1.37
NPM1-203ENST00000393820 HCLS1P14317 486 aaPredicted RBP6.5□□□□□ -1.37
NPM1-203ENST00000393820 ELNP15502 786 aa6.5□□□□□ -1.37
NPM1-203ENST00000393820 CDK8P49336 464 aa6.5□□□□□ -1.37
NPM1-203ENST00000393820 DMTNQ08495 405 aa6.5□□□□□ -1.37
NPM1-203ENST00000393820 IKBKEQ14164 716 aa6.5□□□□□ -1.37
NPM1-203ENST00000393820 MTHFSDQ2M296 383 aaKnown RBP6.5□□□□□ -1.37
NPM1-203ENST00000393820 VPS53Q5VIR6 699 aa6.5□□□□□ -1.37
NPM1-203ENST00000393820 DNAJC5GQ8N7S2 189 aa6.5□□□□□ -1.37
NPM1-203ENST00000393820 TMEM40Q8WWA1 233 aa6.5□□□□□ -1.37
NPM1-203ENST00000393820 CHAMP1Q96JM3 812 aa6.5□□□□□ -1.37
NPM1-203ENST00000393820 UPF3BQ9BZI7 483 aaKnown RBP6.5□□□□□ -1.37
NPM1-203ENST00000393820 USP44Q9H0E7 712 aa6.5□□□□□ -1.37
NPM1-203ENST00000393820 SLC52A2Q9HAB3 445 aa6.5□□□□□ -1.37
NPM1-203ENST00000393820 KCNK4Q9NYG8 393 aa6.5□□□□□ -1.37
NPM1-203ENST00000393820 SMC3Q9UQE7 1217 aa6.5□□□□□ -1.37
NPM1-203ENST00000393820 HDAC5Q9UQL6 1122 aa6.5□□□□□ -1.37
NPM1-203ENST00000393820 PLAAQ9Y263 795 aa6.5□□□□□ -1.37
NPM1-203ENST00000393820 SUGT1Q9Y2Z0 365 aa6.5□□□□□ -1.37
NPM1-203ENST00000393820 SNX14Q9Y5W7 946 aa6.5□□□□□ -1.37
NPM1-203ENST00000393820 ARFGEF1Q9Y6D6 1849 aa6.5□□□□□ -1.37
NPM1-203ENST00000393820 TTC41PQ6P2S7 1318 aa6.5□□□□□ -1.37
NPM1-203ENST00000393820 CCDC171Q6TFL3 1326 aa6.5□□□□□ -1.37
NPM1-203ENST00000393820 PCNTO95613 3336 aa6.49□□□□□ -1.37
NPM1-203ENST00000393820 A0A087WZG4 1122 aa6.49□□□□□ -1.37
NPM1-203ENST00000393820 HTR3BO95264 441 aa6.49□□□□□ -1.37
NPM1-203ENST00000393820 ASMTLO95671 621 aa6.49□□□□□ -1.37
NPM1-203ENST00000393820 STARD3NLO95772 234 aa6.49□□□□□ -1.37
NPM1-203ENST00000393820 CAVIN2O95810 425 aa6.49□□□□□ -1.37
NPM1-203ENST00000393820 S100BP04271 92 aaPredicted RBP6.49□□□□□ -1.37
NPM1-203ENST00000393820 PDGFRBP09619 1106 aa6.49□□□□□ -1.37
NPM1-203ENST00000393820 UBTFL1P0CB47 393 aaPredicted RBP6.49□□□□□ -1.37
NPM1-203ENST00000393820 LRRFIP1Q32MZ4 808 aaKnown RBP6.49□□□□□ -1.37
NPM1-203ENST00000393820 INTS5Q6P9B9 1019 aaKnown RBP6.49□□□□□ -1.37
NPM1-203ENST00000393820 SMIM5Q71RC9 77 aa6.49□□□□□ -1.37
NPM1-203ENST00000393820 FMR1NBQ8N0W7 255 aaPredicted RBP6.49□□□□□ -1.37
NPM1-203ENST00000393820 TAB3Q8N5C8 712 aaPredicted RBP6.49□□□□□ -1.37
NPM1-203ENST00000393820 LSG1Q9H089 658 aaKnown RBP6.49□□□□□ -1.37
NPM1-203ENST00000393820 ALDH8A1Q9H2A2 487 aaPredicted RBP6.49□□□□□ -1.37
NPM1-203ENST00000393820 CHPF2Q9P2E5 772 aa6.49□□□□□ -1.37
NPM1-203ENST00000393820 NARFQ9UHQ1 456 aa6.49□□□□□ -1.37
NPM1-203ENST00000393820 CNPY2Q9Y2B0 182 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms