RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 LDHAP00338 332 aaKnown RBP8.3□□□□□ -1.08
VTI1A-201ENST00000393077 CCDC166P0CW27 439 aa8.3□□□□□ -1.08
VTI1A-201ENST00000393077 NAT1P18440 290 aa8.3□□□□□ -1.08
VTI1A-201ENST00000393077 MCL1Q07820 350 aa8.3□□□□□ -1.08
VTI1A-201ENST00000393077 CPSF1Q10570 1443 aaKnown RBP8.3□□□□□ -1.08
VTI1A-201ENST00000393077 TBL3Q12788 808 aaKnown RBP8.3□□□□□ -1.08
VTI1A-201ENST00000393077 SPATA1Q5VX52 437 aa8.3□□□□□ -1.08
VTI1A-201ENST00000393077 ZNF449Q6P9G9 518 aa8.3□□□□□ -1.08
VTI1A-201ENST00000393077 SIX5Q8N196 739 aa8.3□□□□□ -1.08
VTI1A-201ENST00000393077 NBPF15Q8N660 670 aa8.3□□□□□ -1.08
VTI1A-201ENST00000393077 KRI1Q8N9T8 703 aaKnown RBP8.3□□□□□ -1.08
VTI1A-201ENST00000393077 ZBTB8BQ8NAP8 495 aaPredicted RBP8.3□□□□□ -1.08
VTI1A-201ENST00000393077 CXorf38Q8TB03 319 aa8.3□□□□□ -1.08
VTI1A-201ENST00000393077 RUBCNQ92622 972 aa8.3□□□□□ -1.08
VTI1A-201ENST00000393077 ZNF570Q96NI8 536 aa8.3□□□□□ -1.08
VTI1A-201ENST00000393077 XPO6Q96QU8 1125 aaKnown RBP8.3□□□□□ -1.08
VTI1A-201ENST00000393077 MMTAG2Q9BU76 263 aaKnown RBP8.3□□□□□ -1.08
VTI1A-201ENST00000393077 SNRKQ9NRH2 765 aa8.3□□□□□ -1.08
VTI1A-201ENST00000393077 DMGDHQ9UI17 866 aaKnown RBP8.3□□□□□ -1.08
VTI1A-201ENST00000393077 GSTTP1A0A1W2PQM5 241 aa8.3□□□□□ -1.08
VTI1A-201ENST00000393077 S100BP04271 92 aaPredicted RBP8.3□□□□□ -1.08
VTI1A-201ENST00000393077 ACADSP16219 412 aa8.3□□□□□ -1.08
VTI1A-201ENST00000393077 KPNB1Q14974 876 aaKnown RBP8.3□□□□□ -1.08
VTI1A-201ENST00000393077 CAPN12Q6ZSI9 719 aa8.3□□□□□ -1.08
VTI1A-201ENST00000393077 SESTD1Q86VW0 696 aa8.3□□□□□ -1.08
VTI1A-201ENST00000393077 SCYL3Q8IZE3 742 aa8.3□□□□□ -1.08
VTI1A-201ENST00000393077 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.3□□□□□ -1.08
VTI1A-201ENST00000393077 UBE2OQ9C0C9 1292 aaKnown RBP8.3□□□□□ -1.08
VTI1A-201ENST00000393077 STAP2Q9UGK3 403 aa8.3□□□□□ -1.08
VTI1A-201ENST00000393077 FBXO9Q9UK97 447 aaPredicted RBP8.3□□□□□ -1.08
VTI1A-201ENST00000393077 UTP11Q9Y3A2 253 aaKnown RBP8.3□□□□□ -1.08
VTI1A-201ENST00000393077 SETD1BQ9UPS6 1966 aaKnown RBP8.3□□□□□ -1.08
VTI1A-201ENST00000393077 TEX33O43247 280 aa8.3□□□□□ -1.08
VTI1A-201ENST00000393077 COPS2P61201 443 aa8.3□□□□□ -1.08
VTI1A-201ENST00000393077 IFIT5Q13325 482 aaKnown RBP8.3□□□□□ -1.08
VTI1A-201ENST00000393077 LBRQ14739 615 aaKnown RBP8.3□□□□□ -1.08
VTI1A-201ENST00000393077 TTF1Q15361 905 aaPredicted RBP8.3□□□□□ -1.08
VTI1A-201ENST00000393077 DDB1Q16531 1140 aa8.3□□□□□ -1.08
VTI1A-201ENST00000393077 SPICE1Q8N0Z3 855 aa8.3□□□□□ -1.08
VTI1A-201ENST00000393077 PPP1R14BQ96C90 147 aa8.3□□□□□ -1.08
VTI1A-201ENST00000393077 MTRF1LQ9UGC7 380 aaKnown RBP8.3□□□□□ -1.08
VTI1A-201ENST00000393077 CTNND2Q9UQB3 1225 aa8.3□□□□□ -1.08
VTI1A-201ENST00000393077 LRCH1Q9Y2L9 728 aa8.3□□□□□ -1.08
VTI1A-201ENST00000393077 IQGAP1P46940 1657 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 UBOX5O94941 541 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 VHLP40337 213 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 SFMBT2Q5VUG0 894 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 DHX32Q7L7V1 743 aaKnown RBP8.29□□□□□ -1.08
VTI1A-201ENST00000393077 TRAPPC11Q7Z392 1133 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 TRIM22Q8IYM9 498 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 NMD3Q96D46 503 aaKnown RBP8.29□□□□□ -1.08
VTI1A-201ENST00000393077 MAML3Q96JK9 1138 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 SH3GL1Q99961 368 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 USP44Q9H0E7 712 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 SLC5A4Q9NY91 659 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 DNAJC6O75061 913 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 IDH1O75874 414 aaKnown RBP8.29□□□□□ -1.08
VTI1A-201ENST00000393077 ATP5HO75947 161 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 ATP6V1C1P21283 382 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 SP100P23497 879 aaPredicted RBP8.29□□□□□ -1.08
VTI1A-201ENST00000393077 ATP5DP30049 168 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 PLCD1P51178 756 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 CLCN2P51788 898 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 PPARAQ07869 468 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 PROSER3Q2NL68 480 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 WDR78Q5VTH9 848 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 CCDC25Q86WR0 208 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 SLC17A8Q8NDX2 589 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 CNKSR1Q969H4 720 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 ALG1Q9BT22 464 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 PIDD1Q9HB75 910 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 PARVBQ9HBI1 364 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 MRGBPQ9NV56 204 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 RABL2AQ9UBK7 228 aaPredicted RBP8.29□□□□□ -1.08
VTI1A-201ENST00000393077 BARX2Q9UMQ3 279 aaPredicted RBP8.29□□□□□ -1.08
VTI1A-201ENST00000393077 SCINQ9Y6U3 715 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 PREX1Q8TCU6 1659 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 AGPSO00116 658 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 PHKG2P15735 406 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 DHX9Q08211 1270 aaKnown RBP8.29□□□□□ -1.08
VTI1A-201ENST00000393077 NCCRP1Q6ZVX7 275 aaPredicted RBP8.29□□□□□ -1.08
VTI1A-201ENST00000393077 SAPCD2Q86UD0 394 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 ENGASEQ8NFI3 743 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 CFAP61Q8NHU2 1237 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 AENQ8WTP8 325 aaKnown RBP8.29□□□□□ -1.08
VTI1A-201ENST00000393077 XAGE2Q96GT9 111 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 FAM227BQ96M60 508 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 PTPRUQ92729 1446 aa8.29□□□□□ -1.08
VTI1A-201ENST00000393077 SRRM3A6NNA2 597 aaPredicted RBP8.28□□□□□ -1.08
VTI1A-201ENST00000393077 TRAPPC3O43617 180 aa8.28□□□□□ -1.08
VTI1A-201ENST00000393077 KCNJ2P63252 427 aa8.28□□□□□ -1.08
VTI1A-201ENST00000393077 ZCWPW2Q504Y3 356 aa8.28□□□□□ -1.08
VTI1A-201ENST00000393077 LDHAL6AQ6ZMR3 332 aa8.28□□□□□ -1.08
VTI1A-201ENST00000393077 ANKRD13CQ8N6S4 541 aa8.28□□□□□ -1.08
VTI1A-201ENST00000393077 UHMK1Q8TAS1 419 aaKnown RBP8.28□□□□□ -1.08
VTI1A-201ENST00000393077 MPP4Q96JB8 637 aa8.28□□□□□ -1.08
VTI1A-201ENST00000393077 LBHD1Q9BQE6 289 aaPredicted RBP8.28□□□□□ -1.08
VTI1A-201ENST00000393077 ABHD10Q9NUJ1 306 aa8.28□□□□□ -1.08
VTI1A-201ENST00000393077 BABAM1Q9NWV8 329 aa8.28□□□□□ -1.08
VTI1A-201ENST00000393077 TRIM10Q9UDY6 481 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms