RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 SUGCTQ9HAC7 445 aa13.8□□□□□ -0.2
CLTC-202ENST00000393043 TYW1Q9NV66 732 aaKnown RBP13.8□□□□□ -0.2
CLTC-202ENST00000393043 CSF1RP07333 972 aa13.8□□□□□ -0.2
CLTC-202ENST00000393043 ATP1A3P13637 1013 aa13.8□□□□□ -0.2
CLTC-202ENST00000393043 GUCY2FP51841 1108 aa13.8□□□□□ -0.2
CLTC-202ENST00000393043 KCTD2Q14681 263 aa13.8□□□□□ -0.2
CLTC-202ENST00000393043 HHATQ5VTY9 493 aa13.8□□□□□ -0.2
CLTC-202ENST00000393043 UNC13DQ70J99 1090 aa13.8□□□□□ -0.2
CLTC-202ENST00000393043 SPTLC3Q9NUV7 552 aa13.8□□□□□ -0.2
CLTC-202ENST00000393043 INPP5BP32019 993 aa13.8□□□□□ -0.2
CLTC-202ENST00000393043 CRKP46108 304 aa13.8□□□□□ -0.2
CLTC-202ENST00000393043 GOLGA8FQ08AF8 430 aa13.8□□□□□ -0.2
CLTC-202ENST00000393043 GOLGA8DPQ0D2H9 430 aa13.8□□□□□ -0.2
CLTC-202ENST00000393043 SCARF1Q14162 830 aa13.8□□□□□ -0.2
CLTC-202ENST00000393043 KRT31Q15323 416 aa13.8□□□□□ -0.2
CLTC-202ENST00000393043 CCDC125Q86Z20 511 aa13.8□□□□□ -0.2
CLTC-202ENST00000393043 FAM71BQ8TC56 605 aa13.8□□□□□ -0.2
CLTC-202ENST00000393043 FAM84BQ96KN1 310 aaPredicted RBP13.8□□□□□ -0.2
CLTC-202ENST00000393043 SPC25Q9HBM1 224 aa13.8□□□□□ -0.2
CLTC-202ENST00000393043 SEPT9Q9UHD8 586 aaPredicted RBP13.8□□□□□ -0.2
CLTC-202ENST00000393043 KRT15P19012 456 aa13.79□□□□□ -0.2
CLTC-202ENST00000393043 CCND2P30279 289 aa13.79□□□□□ -0.2
CLTC-202ENST00000393043 YARSP54577 528 aaKnown RBP13.79□□□□□ -0.2
CLTC-202ENST00000393043 UBXN2AP68543 259 aa13.79□□□□□ -0.2
CLTC-202ENST00000393043 MIS18BP1Q6P0N0 1132 aa13.79□□□□□ -0.2
CLTC-202ENST00000393043 C10orf67Q8IYJ2 551 aa13.79□□□□□ -0.2
CLTC-202ENST00000393043 GDAP1L1Q96MZ0 367 aa13.79□□□□□ -0.2
CLTC-202ENST00000393043 GOLPH3LQ9H4A5 285 aa13.79□□□□□ -0.2
CLTC-202ENST00000393043 STAM2O75886 525 aa13.79□□□□□ -0.2
CLTC-202ENST00000393043 RAD17O75943 681 aa13.79□□□□□ -0.2
CLTC-202ENST00000393043 NDUFA10O95299 355 aa13.79□□□□□ -0.2
CLTC-202ENST00000393043 RASA3Q14644 834 aa13.79□□□□□ -0.2
CLTC-202ENST00000393043 ARHGAP27Q6ZUM4 889 aa13.79□□□□□ -0.2
CLTC-202ENST00000393043 TTLL6Q8N841 843 aa13.79□□□□□ -0.2
CLTC-202ENST00000393043 GPR101Q96P66 508 aaPredicted RBP13.79□□□□□ -0.2
CLTC-202ENST00000393043 KMT5AQ9NQR1 393 aa13.79□□□□□ -0.2
CLTC-202ENST00000393043 ST7Q9NRC1 585 aa13.79□□□□□ -0.2
CLTC-202ENST00000393043 ASNSP08243 561 aa13.79□□□□□ -0.2
CLTC-202ENST00000393043 CEP85LQ5SZL2 805 aa13.79□□□□□ -0.2
CLTC-202ENST00000393043 MB21D1Q8N884 522 aa13.79□□□□□ -0.2
CLTC-202ENST00000393043 RSAD2Q8WXG1 361 aa13.79□□□□□ -0.2
CLTC-202ENST00000393043 MFAP3LO75121 409 aa13.79□□□□□ -0.2
CLTC-202ENST00000393043 SERPING1P05155 500 aa13.79□□□□□ -0.2
CLTC-202ENST00000393043 PIK3CAP42336 1068 aa13.79□□□□□ -0.2
CLTC-202ENST00000393043 MAN1A1P33908 653 aa13.78□□□□□ -0.2
CLTC-202ENST00000393043 CCNA1P78396 465 aa13.78□□□□□ -0.2
CLTC-202ENST00000393043 MAP7D1Q3KQU3 841 aa13.78□□□□□ -0.2
CLTC-202ENST00000393043 STOX1Q6ZVD7 989 aa13.78□□□□□ -0.2
CLTC-202ENST00000393043 ZNF34Q8IZ26 560 aa13.78□□□□□ -0.2
CLTC-202ENST00000393043 HOMER3Q9NSC5 361 aa13.78□□□□□ -0.2
CLTC-202ENST00000393043 JRKLQ9Y4A0 524 aa13.78□□□□□ -0.2
CLTC-202ENST00000393043 SOWAHDA6NJG2 315 aa13.78□□□□□ -0.2
CLTC-202ENST00000393043 USP17L5A8MUK1 530 aa13.78□□□□□ -0.2
CLTC-202ENST00000393043 TBC1D8O95759 1140 aa13.78□□□□□ -0.2
CLTC-202ENST00000393043 CACNB1Q02641 598 aaPredicted RBP13.78□□□□□ -0.2
CLTC-202ENST00000393043 EAPPQ56P03 285 aaPredicted RBP13.78□□□□□ -0.2
CLTC-202ENST00000393043 CIAPIN1Q6FI81 312 aa13.78□□□□□ -0.2
CLTC-202ENST00000393043 NHEJ1Q9H9Q4 299 aaPredicted RBP13.78□□□□□ -0.2
CLTC-202ENST00000393043 ZNF609O15014 1411 aa13.78□□□□□ -0.2
CLTC-202ENST00000393043 PVALEFA0A1B0GWK0 134 aa13.78□□□□□ -0.2
CLTC-202ENST00000393043 MEIS1O00470 390 aa13.78□□□□□ -0.2
CLTC-202ENST00000393043 DDIT3P35638 169 aa13.78□□□□□ -0.2
CLTC-202ENST00000393043 CEP57Q86XR8 500 aa13.78□□□□□ -0.2
CLTC-202ENST00000393043 HESX1Q9UBX0 185 aa13.78□□□□□ -0.2
CLTC-202ENST00000393043 SUGT1Q9Y2Z0 365 aa13.78□□□□□ -0.2
CLTC-202ENST00000393043 MRPS9P82933 396 aaKnown RBP13.78□□□□□ -0.2
CLTC-202ENST00000393043 SF3B3Q15393 1217 aaKnown RBP13.78□□□□□ -0.2
CLTC-202ENST00000393043 CCDC110Q8TBZ0 833 aa13.78□□□□□ -0.2
CLTC-202ENST00000393043 MRRFQ96E11 262 aaKnown RBP13.78□□□□□ -0.2
CLTC-202ENST00000393043 VPS37BQ9H9H4 285 aa13.78□□□□□ -0.2
CLTC-202ENST00000393043 PASKQ96RG2 1323 aa13.78□□□□□ -0.2
CLTC-202ENST00000393043 MYO1FO00160 1098 aa13.77□□□□□ -0.2
CLTC-202ENST00000393043 ADCY8P40145 1251 aa13.77□□□□□ -0.2
CLTC-202ENST00000393043 PROM2Q8N271 834 aa13.77□□□□□ -0.2
CLTC-202ENST00000393043 HAUS1Q96CS2 278 aa13.77□□□□□ -0.2
CLTC-202ENST00000393043 CEP170P1Q96L14 293 aa13.77□□□□□ -0.2
CLTC-202ENST00000393043 MXD3Q9BW11 206 aa13.77□□□□□ -0.2
CLTC-202ENST00000393043 BARHL2Q9NY43 387 aa13.77□□□□□ -0.2
CLTC-202ENST00000393043 ANKFY1Q9P2R3 1169 aa13.77□□□□□ -0.2
CLTC-202ENST00000393043 CD163L1Q9NR16 1453 aa13.77□□□□□ -0.2
CLTC-202ENST00000393043 PHBP35232 272 aa13.77□□□□□ -0.2
CLTC-202ENST00000393043 CUL4BQ13620 913 aa13.77□□□□□ -0.2
CLTC-202ENST00000393043 RAB3IL1Q8TBN0 382 aa13.77□□□□□ -0.2
CLTC-202ENST00000393043 SARNPP82979 210 aaKnown RBP13.77□□□□□ -0.21
CLTC-202ENST00000393043 RC3H1Q5TC82 1133 aaKnown RBP13.77□□□□□ -0.21
CLTC-202ENST00000393043 ACRBPQ8NEB7 543 aa13.77□□□□□ -0.21
CLTC-202ENST00000393043 OXER1Q8TDS5 423 aa13.77□□□□□ -0.21
CLTC-202ENST00000393043 HAUS2Q9NVX0 235 aa13.77□□□□□ -0.21
CLTC-202ENST00000393043 GCNT4Q9P109 453 aa13.77□□□□□ -0.21
CLTC-202ENST00000393043 ENC1O14682 589 aa13.77□□□□□ -0.21
CLTC-202ENST00000393043 GH2P01242 217 aa13.77□□□□□ -0.21
CLTC-202ENST00000393043 NEDD1Q8NHV4 660 aa13.77□□□□□ -0.21
CLTC-202ENST00000393043 PREX1Q8TCU6 1659 aa13.77□□□□□ -0.21
CLTC-202ENST00000393043 EIF4A3P38919 411 aaKnown RBP13.77□□□□□ -0.21
CLTC-202ENST00000393043 LMNB2Q03252 620 aa13.77□□□□□ -0.21
CLTC-202ENST00000393043 CEP95Q96GE4 821 aa13.77□□□□□ -0.21
CLTC-202ENST00000393043 PDLIM2Q96JY6 352 aa13.77□□□□□ -0.21
CLTC-202ENST00000393043 FAM114A2Q9NRY5 505 aa13.77□□□□□ -0.21
CLTC-202ENST00000393043 CLIC2O15247 247 aa13.76□□□□□ -0.21
CLTC-202ENST00000393043 RNF8O76064 485 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms