RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 KCNG4Q8TDN1 519 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 N4BP2L2Q92802 583 aaPredicted RBP4.03□□□□□ -1.76
XRN1-202ENST00000392981 EMC7Q9NPA0 242 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 SCUBE2Q9NQ36 999 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 APEX2Q9UBZ4 518 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 CHURC1-FNTBB4DL54 471 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 CPLX1O14810 134 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 MTA2O94776 668 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 FOSL1P15407 271 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 CDK17Q00537 523 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 PCDH1Q08174 1060 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 CTC1Q2NKJ3 1217 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 LMBR1LQ6UX01 489 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 VSIG1Q86XK7 387 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 SLC35G2Q8TBE7 412 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 PTPRN2Q92932 1015 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 PLPPR2Q96GM1 343 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 TIMMDC1Q9NPL8 285 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 FANCIQ9NVI1 1328 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 MATR3P43243 847 aaKnown RBP eCLIP4.03□□□□□ -1.763e-9■■■■■ 33.3
XRN1-202ENST00000392981 AMPHP49418 695 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 MCM2P49736 904 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 FOXC1Q12948 553 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 RETSATQ6NUM9 610 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 CCDC150Q8NCX0 1101 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 LRRC46Q96FV0 321 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 SGCZQ96LD1 299 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 SORBS1Q9BX66 1292 aaKnown RBP4.03□□□□□ -1.76
XRN1-202ENST00000392981 TBC1D22BQ9NU19 505 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 A8MV72 311 aaPredicted RBP4.03□□□□□ -1.77
XRN1-202ENST00000392981 NCK2O43639 380 aa4.03□□□□□ -1.77
XRN1-202ENST00000392981 GLRX3O76003 335 aaKnown RBP4.03□□□□□ -1.77
XRN1-202ENST00000392981 CLEC2LP0C7M8 214 aa4.03□□□□□ -1.77
XRN1-202ENST00000392981 SSR1P43307 286 aaKnown RBP4.03□□□□□ -1.77
XRN1-202ENST00000392981 RAD52P43351 418 aa4.03□□□□□ -1.77
XRN1-202ENST00000392981 PDE6CP51160 858 aa4.03□□□□□ -1.77
XRN1-202ENST00000392981 WDR4P57081 412 aaKnown RBP4.03□□□□□ -1.77
XRN1-202ENST00000392981 RPS26P62854 115 aaKnown RBP4.03□□□□□ -1.77
XRN1-202ENST00000392981 KCNC4Q03721 635 aa4.03□□□□□ -1.77
XRN1-202ENST00000392981 LONRF2Q1L5Z9 754 aa4.03□□□□□ -1.77
XRN1-202ENST00000392981 KLHDC7AQ5VTJ3 777 aa4.03□□□□□ -1.77
XRN1-202ENST00000392981 FAM117BQ6P1L5 589 aa4.03□□□□□ -1.77
XRN1-202ENST00000392981 OLFM4Q6UX06 510 aa4.03□□□□□ -1.77
XRN1-202ENST00000392981 FASTKD5Q7L8L6 764 aaKnown RBP4.03□□□□□ -1.77
XRN1-202ENST00000392981 SIRT2Q8IXJ6 389 aa4.03□□□□□ -1.77
XRN1-202ENST00000392981 ZZZ3Q8IYH5 903 aa4.03□□□□□ -1.77
XRN1-202ENST00000392981 BVESQ8NE79 360 aa4.03□□□□□ -1.77
XRN1-202ENST00000392981 GSDMBQ8TAX9 411 aa4.03□□□□□ -1.77
XRN1-202ENST00000392981 ATG4CQ96DT6 458 aa4.03□□□□□ -1.77
XRN1-202ENST00000392981 TMEM169Q96HH4 297 aa4.03□□□□□ -1.77
XRN1-202ENST00000392981 FMNL2Q96PY5 1086 aa4.03□□□□□ -1.77
XRN1-202ENST00000392981 INSM2Q96T92 566 aaPredicted RBP4.03□□□□□ -1.77
XRN1-202ENST00000392981 CHCHD6Q9BRQ6 235 aa4.03□□□□□ -1.77
XRN1-202ENST00000392981 ANO3Q9BYT9 981 aa4.03□□□□□ -1.77
XRN1-202ENST00000392981 UNKQ9C0B0 810 aaKnown RBP4.03□□□□□ -1.77
XRN1-202ENST00000392981 BRD8Q9H0E9 1235 aa4.03□□□□□ -1.77
XRN1-202ENST00000392981 CLEC4MQ9H2X3 399 aaPredicted RBP4.03□□□□□ -1.77
XRN1-202ENST00000392981 ALG13Q9NP73 1137 aaKnown RBP4.03□□□□□ -1.77
XRN1-202ENST00000392981 FEZ2Q9UHY8 353 aaPredicted RBP4.03□□□□□ -1.77
XRN1-202ENST00000392981 LTBP3Q9NS15 1303 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 FIGNL2A6NMB9 653 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 AQP7O14520 342 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 KDM1AO60341 852 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 RFPL3O75679 317 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 NCAM1P13591 858 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 TDGQ13569 410 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 MTFR1Q15390 333 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 EFHC2Q5JST6 749 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 IFFO2Q5TF58 517 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 DENND1CQ8IV53 801 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 CCDC117Q8IWD4 279 aaPredicted RBP4.02□□□□□ -1.77
XRN1-202ENST00000392981 C1orf162Q8NEQ5 155 aaPredicted RBP4.02□□□□□ -1.77
XRN1-202ENST00000392981 B3GNT5Q9BYG0 378 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 XPO4Q9C0E2 1151 aaKnown RBP4.02□□□□□ -1.77
XRN1-202ENST00000392981 SLAMF7Q9NQ25 335 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 GMIPQ9P107 970 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 TRIM38O00635 465 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 NME2P22392 152 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 ARL4DP49703 201 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 HIBCHQ6NVY1 386 aaPredicted RBP4.02□□□□□ -1.77
XRN1-202ENST00000392981 CCNJLQ8IV13 435 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 ANKRD24Q8TF21 1146 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 MPHOSPH8Q99549 860 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 CNPPD1Q9BV87 410 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 UBE2OQ9C0C9 1292 aaKnown RBP4.02□□□□□ -1.77
XRN1-202ENST00000392981 SENP6Q9GZR1 1112 aaPredicted RBP4.02□□□□□ -1.77
XRN1-202ENST00000392981 ASCC2Q9H1I8 757 aaPredicted RBP4.02□□□□□ -1.77
XRN1-202ENST00000392981 COQ3Q9NZJ6 369 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 MTRRQ9UBK8 725 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 MOSPD1Q9UJG1 213 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 CAPN8A6NHC0 703 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 FAM155AB1AL88 458 aaPredicted RBP4.02□□□□□ -1.77
XRN1-202ENST00000392981 TLR5O60602 858 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 EYA4O95677 639 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 TBX18O95935 607 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 SLC9A1P19634 815 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 INPP5BP32019 993 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 GRK4P32298 578 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 FAPQ12884 760 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 TRPC3Q13507 836 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms