RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 LZTS2Q9BRK4 669 aa12.02□□□□□ -0.49
BRF1-204ENST00000392557 PPP1R1BQ9UD71 204 aaPredicted RBP12.02□□□□□ -0.49
BRF1-204ENST00000392557 MYH8P13535 1937 aa12.01□□□□□ -0.49
BRF1-204ENST00000392557 TTLL1O95922 423 aa12.01□□□□□ -0.49
BRF1-204ENST00000392557 MYBL2P10244 700 aa12.01□□□□□ -0.49
BRF1-204ENST00000392557 FCER1AP12319 257 aa12.01□□□□□ -0.49
BRF1-204ENST00000392557 SNAP25P60880 206 aa12.01□□□□□ -0.49
BRF1-204ENST00000392557 GNGT1P63211 74 aa12.01□□□□□ -0.49
BRF1-204ENST00000392557 NLRC4Q9NPP4 1024 aa12.01□□□□□ -0.49
BRF1-204ENST00000392557 SH3GLB2Q9NR46 395 aa12.01□□□□□ -0.49
BRF1-204ENST00000392557 RCCD1A6NED2 376 aa12.01□□□□□ -0.49
BRF1-204ENST00000392557 NCK2O43639 380 aa12.01□□□□□ -0.49
BRF1-204ENST00000392557 E2F4Q16254 413 aa12.01□□□□□ -0.49
BRF1-204ENST00000392557 PODNQ7Z5L7 613 aa12.01□□□□□ -0.49
BRF1-204ENST00000392557 FAM114A1Q8IWE2 563 aa12.01□□□□□ -0.49
BRF1-204ENST00000392557 PPM1EQ8WY54 764 aa12.01□□□□□ -0.49
BRF1-204ENST00000392557 CAPN11Q9UMQ6 739 aa12.01□□□□□ -0.49
BRF1-204ENST00000392557 DDTLA6NHG4 134 aaPredicted RBP12□□□□□ -0.49
BRF1-204ENST00000392557 HSF2BPO75031 334 aa12□□□□□ -0.49
BRF1-204ENST00000392557 PPFIA4O75335 1185 aa12□□□□□ -0.49
BRF1-204ENST00000392557 PLCG1P19174 1290 aa12□□□□□ -0.49
BRF1-204ENST00000392557 AMPD2Q01433 879 aa12□□□□□ -0.49
BRF1-204ENST00000392557 NFRKBQ6P4R8 1299 aa12□□□□□ -0.49
BRF1-204ENST00000392557 NOC3LQ8WTT2 800 aaKnown RBP12□□□□□ -0.49
BRF1-204ENST00000392557 LRRC1Q9BTT6 524 aa12□□□□□ -0.49
BRF1-204ENST00000392557 SPZ1Q9BXG8 430 aa12□□□□□ -0.49
BRF1-204ENST00000392557 EHD4Q9H223 541 aa12□□□□□ -0.49
BRF1-204ENST00000392557 STK32BQ9NY57 414 aa12□□□□□ -0.49
BRF1-204ENST00000392557 MYH1P12882 1939 aa12□□□□□ -0.49
BRF1-204ENST00000392557 CLRN2A0PK11 232 aa12□□□□□ -0.49
BRF1-204ENST00000392557 BICDL2A1A5D9 508 aa12□□□□□ -0.49
BRF1-204ENST00000392557 PSMD14O00487 310 aa12□□□□□ -0.49
BRF1-204ENST00000392557 RAD17O75943 681 aa12□□□□□ -0.49
BRF1-204ENST00000392557 SHMT1P34896 483 aa12□□□□□ -0.49
BRF1-204ENST00000392557 WDR93Q6P2C0 686 aa12□□□□□ -0.49
BRF1-204ENST00000392557 HDAC7Q8WUI4 952 aa12□□□□□ -0.49
BRF1-204ENST00000392557 GJA10Q969M2 543 aa12□□□□□ -0.49
BRF1-204ENST00000392557 LRRC10BA6NIK2 292 aa12□□□□□ -0.49
BRF1-204ENST00000392557 PDE2AO00408 941 aaPredicted RBP12□□□□□ -0.49
BRF1-204ENST00000392557 MAGEA1P43355 309 aa12□□□□□ -0.49
BRF1-204ENST00000392557 MAGEA9P43362 315 aa12□□□□□ -0.49
BRF1-204ENST00000392557 GUCY2FP51841 1108 aa12□□□□□ -0.49
BRF1-204ENST00000392557 ANKRD40Q6AI12 368 aa12□□□□□ -0.49
BRF1-204ENST00000392557 C8orf74Q6P047 294 aa12□□□□□ -0.49
BRF1-204ENST00000392557 IRF2BP1Q8IU81 584 aa12□□□□□ -0.49
BRF1-204ENST00000392557 CALML4Q96GE6 196 aa12□□□□□ -0.49
BRF1-204ENST00000392557 CAPS2Q9BXY5 557 aa12□□□□□ -0.49
BRF1-204ENST00000392557 USP17L10C9JJH3 530 aa11.99□□□□□ -0.49
BRF1-204ENST00000392557 KIAA0754O94854 1291 aa11.99□□□□□ -0.49
BRF1-204ENST00000392557 SYF2O95926 243 aaKnown RBP11.99□□□□□ -0.49
BRF1-204ENST00000392557 EPS15P42566 896 aa11.99□□□□□ -0.49
BRF1-204ENST00000392557 ZBED6P86452 979 aa11.99□□□□□ -0.49
BRF1-204ENST00000392557 RASSF7Q02833 373 aa11.99□□□□□ -0.49
BRF1-204ENST00000392557 STK4Q13043 487 aa11.99□□□□□ -0.49
BRF1-204ENST00000392557 CERKLQ49MI3 558 aaPredicted RBP11.99□□□□□ -0.49
BRF1-204ENST00000392557 WDR59Q6PJI9 974 aa11.99□□□□□ -0.49
BRF1-204ENST00000392557 KRT25Q7Z3Z0 450 aa11.99□□□□□ -0.49
BRF1-204ENST00000392557 NEK8Q86SG6 692 aa11.99□□□□□ -0.49
BRF1-204ENST00000392557 GPATCH11Q8N954 259 aa11.99□□□□□ -0.49
BRF1-204ENST00000392557 P2RX5Q93086 422 aa11.99□□□□□ -0.49
BRF1-204ENST00000392557 NUP58Q9BVL2 599 aa11.99□□□□□ -0.49
BRF1-204ENST00000392557 ESYT3A0FGR9 886 aa11.99□□□□□ -0.49
BRF1-204ENST00000392557 TCP10L2B9ZVM9 353 aa11.99□□□□□ -0.49
BRF1-204ENST00000392557 NDUFAB1O14561 156 aa11.99□□□□□ -0.49
BRF1-204ENST00000392557 EIF4A3P38919 411 aaKnown RBP11.99□□□□□ -0.49
BRF1-204ENST00000392557 ADCY7P51828 1080 aa11.99□□□□□ -0.49
BRF1-204ENST00000392557 HLTFQ14527 1009 aaKnown RBP eCLIP11.99□□□□□ -0.497e-7■■■□□ 14.7
BRF1-204ENST00000392557 POTEDQ86YR6 584 aa11.99□□□□□ -0.49
BRF1-204ENST00000392557 ADGRF4Q8IZF3 695 aa11.99□□□□□ -0.49
BRF1-204ENST00000392557 RPGRIP1Q96KN7 1286 aa11.99□□□□□ -0.49
BRF1-204ENST00000392557 ZMYND12Q9H0C1 365 aa11.99□□□□□ -0.49
BRF1-204ENST00000392557 DMGDHQ9UI17 866 aaKnown RBP11.99□□□□□ -0.49
BRF1-204ENST00000392557 SCAF8Q9UPN6 1271 aaKnown RBP11.99□□□□□ -0.49
BRF1-204ENST00000392557 HMGB2P26583 209 aaKnown RBP11.99□□□□□ -0.49
BRF1-204ENST00000392557 SLC1A4P43007 532 aa11.99□□□□□ -0.49
BRF1-204ENST00000392557 MNAT1P51948 309 aa11.99□□□□□ -0.49
BRF1-204ENST00000392557 SLC15A2Q16348 729 aa11.99□□□□□ -0.49
BRF1-204ENST00000392557 RNF187Q5TA31 235 aaPredicted RBP11.99□□□□□ -0.49
BRF1-204ENST00000392557 CCNI2Q6ZMN8 369 aaPredicted RBP11.99□□□□□ -0.49
BRF1-204ENST00000392557 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.99□□□□□ -0.49
BRF1-204ENST00000392557 MAATS1Q7Z4T9 603 aa11.99□□□□□ -0.49
BRF1-204ENST00000392557 SPICE1Q8N0Z3 855 aa11.99□□□□□ -0.49
BRF1-204ENST00000392557 TRIM58Q8NG06 486 aa11.99□□□□□ -0.49
BRF1-204ENST00000392557 THAP9Q9H5L6 903 aa11.99□□□□□ -0.49
BRF1-204ENST00000392557 OR52Z1P0C646 297 aa11.98□□□□□ -0.49
BRF1-204ENST00000392557 AMPD3Q01432 767 aa11.98□□□□□ -0.49
BRF1-204ENST00000392557 GABPAQ06546 454 aa11.98□□□□□ -0.49
BRF1-204ENST00000392557 SEPT2Q15019 361 aa11.98□□□□□ -0.49
BRF1-204ENST00000392557 LRRC41Q15345 812 aa11.98□□□□□ -0.49
BRF1-204ENST00000392557 CCDC40Q4G0X9 1142 aa11.98□□□□□ -0.49
BRF1-204ENST00000392557 HHIPL2Q6UWX4 724 aa11.98□□□□□ -0.49
BRF1-204ENST00000392557 DEFB132Q7Z7B7 95 aa11.98□□□□□ -0.49
BRF1-204ENST00000392557 TBC1D7Q9P0N9 293 aa11.98□□□□□ -0.49
BRF1-204ENST00000392557 SUGT1Q9Y2Z0 365 aa11.98□□□□□ -0.49
BRF1-204ENST00000392557 TDP2O95551 362 aa11.98□□□□□ -0.49
BRF1-204ENST00000392557 EEF2P13639 858 aaKnown RBP11.98□□□□□ -0.49
BRF1-204ENST00000392557 ASPRV1Q53RT3 343 aa11.98□□□□□ -0.49
BRF1-204ENST00000392557 ARL6IP4Q66PJ3 421 aaKnown RBP11.98□□□□□ -0.49
BRF1-204ENST00000392557 C4orf32Q8N8J7 132 aa11.98□□□□□ -0.49
BRF1-204ENST00000392557 CNKSR1Q969H4 720 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms