RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 SPATA31C2B4DYI2 1134 aa13.57□□□□□ -0.24
RFC4-202ENST00000392481 FIBPO43427 364 aa13.57□□□□□ -0.24
RFC4-202ENST00000392481 GGPS1O95749 300 aa13.57□□□□□ -0.24
RFC4-202ENST00000392481 FOSP01100 380 aaPredicted RBP13.57□□□□□ -0.24
RFC4-202ENST00000392481 HOXD8P13378 290 aaPredicted RBP13.57□□□□□ -0.24
RFC4-202ENST00000392481 UBA1P22314 1058 aaKnown RBP13.57□□□□□ -0.24
RFC4-202ENST00000392481 ITGB8P26012 769 aa13.57□□□□□ -0.24
RFC4-202ENST00000392481 FXR1P51114 621 aaKnown RBP eCLIP13.57□□□□□ -0.24
RFC4-202ENST00000392481 CCT2P78371 535 aaKnown RBP13.57□□□□□ -0.24
RFC4-202ENST00000392481 AKAP17AQ02040 695 aaKnown RBP13.57□□□□□ -0.24
RFC4-202ENST00000392481 SP2Q02086 613 aa13.57□□□□□ -0.24
RFC4-202ENST00000392481 PKN1Q16512 942 aa13.57□□□□□ -0.24
RFC4-202ENST00000392481 NFRKBQ6P4R8 1299 aa13.57□□□□□ -0.24
RFC4-202ENST00000392481 TDHQ8IZJ6 230 aa13.57□□□□□ -0.24
RFC4-202ENST00000392481 RNF26Q9BY78 433 aaPredicted RBP13.57□□□□□ -0.24
RFC4-202ENST00000392481 ALDH8A1Q9H2A2 487 aaPredicted RBP13.57□□□□□ -0.24
RFC4-202ENST00000392481 EHMT1Q9H9B1 1298 aa13.57□□□□□ -0.24
RFC4-202ENST00000392481 NCOA5Q9HCD5 579 aaKnown RBP13.57□□□□□ -0.24
RFC4-202ENST00000392481 RTEL1Q9NZ71 1219 aa13.57□□□□□ -0.24
RFC4-202ENST00000392481 PCDHA6Q9UN73 950 aa13.57□□□□□ -0.24
RFC4-202ENST00000392481 PCDHA8Q9Y5H6 950 aa13.57□□□□□ -0.24
RFC4-202ENST00000392481 ESYT2A0FGR8 921 aa13.56□□□□□ -0.24
RFC4-202ENST00000392481 PPFIA4O75335 1185 aa13.56□□□□□ -0.24
RFC4-202ENST00000392481 TIMP1P01033 207 aa13.56□□□□□ -0.24
RFC4-202ENST00000392481 NEDD9Q14511 834 aa13.56□□□□□ -0.24
RFC4-202ENST00000392481 NBPF20Q3BBV1 942 aa13.56□□□□□ -0.24
RFC4-202ENST00000392481 NLRX1Q86UT6 975 aa13.56□□□□□ -0.24
RFC4-202ENST00000392481 CCDC12Q8WUD4 166 aaPredicted RBP13.56□□□□□ -0.24
RFC4-202ENST00000392481 PHKBQ93100 1093 aa13.56□□□□□ -0.24
RFC4-202ENST00000392481 SPATA33Q96N06 139 aa13.56□□□□□ -0.24
RFC4-202ENST00000392481 TRPV6Q9H1D0 765 aa13.56□□□□□ -0.24
RFC4-202ENST00000392481 MLXIPQ9HAP2 919 aa13.56□□□□□ -0.24
RFC4-202ENST00000392481 SEC24BO95487 1268 aa13.56□□□□□ -0.24
RFC4-202ENST00000392481 SUPT20HL2P0C7V6 817 aa13.56□□□□□ -0.24
RFC4-202ENST00000392481 PTPN11Q06124 597 aaPredicted RBP13.56□□□□□ -0.24
RFC4-202ENST00000392481 SEMA3FQ13275 785 aa13.56□□□□□ -0.24
RFC4-202ENST00000392481 AP3B2Q13367 1082 aa13.56□□□□□ -0.24
RFC4-202ENST00000392481 HSDL1Q3SXM5 330 aa13.56□□□□□ -0.24
RFC4-202ENST00000392481 METTL7BQ6UX53 244 aa13.56□□□□□ -0.24
RFC4-202ENST00000392481 KAT2BQ92831 832 aa13.56□□□□□ -0.24
RFC4-202ENST00000392481 GPRASP2Q96D09 838 aa13.56□□□□□ -0.24
RFC4-202ENST00000392481 CDHR1Q96JP9 859 aa13.56□□□□□ -0.24
RFC4-202ENST00000392481 SENP7Q9BQF6 1050 aa13.56□□□□□ -0.24
RFC4-202ENST00000392481 LARP6Q9BRS8 491 aaKnown RBP13.56□□□□□ -0.24
RFC4-202ENST00000392481 SLC26A6Q9BXS9 759 aa13.56□□□□□ -0.24
RFC4-202ENST00000392481 ZMYND12Q9H0C1 365 aa13.56□□□□□ -0.24
RFC4-202ENST00000392481 SZT2Q5T011 3432 aa13.55□□□□□ -0.24
RFC4-202ENST00000392481 CPLX1O14810 134 aa13.55□□□□□ -0.24
RFC4-202ENST00000392481 B4GALT4O60513 344 aa13.55□□□□□ -0.24
RFC4-202ENST00000392481 ITGB5P18084 799 aa13.55□□□□□ -0.24
RFC4-202ENST00000392481 CLK2P49760 499 aaKnown RBP13.55□□□□□ -0.24
RFC4-202ENST00000392481 ANKRD1Q15327 319 aa13.55□□□□□ -0.24
RFC4-202ENST00000392481 FAM47CQ5HY64 1035 aa13.55□□□□□ -0.24
RFC4-202ENST00000392481 MCTP2Q6DN12 878 aa13.55□□□□□ -0.24
RFC4-202ENST00000392481 MFSD5Q6N075 450 aa13.55□□□□□ -0.24
RFC4-202ENST00000392481 CPLX2Q6PUV4 134 aaKnown RBP13.55□□□□□ -0.24
RFC4-202ENST00000392481 TRIM22Q8IYM9 498 aa13.55□□□□□ -0.24
RFC4-202ENST00000392481 GIMAP8Q8ND71 665 aaPredicted RBP13.55□□□□□ -0.24
RFC4-202ENST00000392481 ANO3Q9BYT9 981 aa13.55□□□□□ -0.24
RFC4-202ENST00000392481 C6orf50Q9HD87 102 aa13.55□□□□□ -0.24
RFC4-202ENST00000392481 UBIAD1Q9Y5Z9 338 aa13.55□□□□□ -0.24
RFC4-202ENST00000392481 MAFGO15525 162 aa13.54□□□□□ -0.24
RFC4-202ENST00000392481 SORBS3O60504 671 aa13.54□□□□□ -0.24
RFC4-202ENST00000392481 F2P00734 622 aa13.54□□□□□ -0.24
RFC4-202ENST00000392481 GNA11P29992 359 aa13.54□□□□□ -0.24
RFC4-202ENST00000392481 FPGSQ05932 587 aa13.54□□□□□ -0.24
RFC4-202ENST00000392481 SSRP1Q08945 709 aaKnown RBP13.54□□□□□ -0.24
RFC4-202ENST00000392481 STK3Q13188 491 aa13.54□□□□□ -0.24
RFC4-202ENST00000392481 LRIT3Q3SXY7 679 aa13.54□□□□□ -0.24
RFC4-202ENST00000392481 CYFIP1Q7L576 1253 aa13.54□□□□□ -0.24
RFC4-202ENST00000392481 SESTD1Q86VW0 696 aa13.54□□□□□ -0.24
RFC4-202ENST00000392481 KATNAL1Q9BW62 490 aa13.54□□□□□ -0.24
RFC4-202ENST00000392481 HIPK3Q9H422 1215 aa13.54□□□□□ -0.24
RFC4-202ENST00000392481 BCAS3Q9H6U6 928 aa13.54□□□□□ -0.24
RFC4-202ENST00000392481 JADE2Q9NQC1 790 aa13.54□□□□□ -0.24
RFC4-202ENST00000392481 SH3GLB2Q9NR46 395 aa13.54□□□□□ -0.24
RFC4-202ENST00000392481 TRMT13Q9NUP7 481 aaKnown RBP13.54□□□□□ -0.24
RFC4-202ENST00000392481 NOP56O00567 594 aaKnown RBP13.53□□□□□ -0.24
RFC4-202ENST00000392481 PPFIA3O75145 1194 aa13.53□□□□□ -0.24
RFC4-202ENST00000392481 ZNF286BP0CG31 522 aa13.53□□□□□ -0.24
RFC4-202ENST00000392481 SREBF1P36956 1147 aa13.53□□□□□ -0.24
RFC4-202ENST00000392481 PSEN2P49810 448 aa13.53□□□□□ -0.24
RFC4-202ENST00000392481 CHMP4BP1P59074 171 aa13.53□□□□□ -0.24
RFC4-202ENST00000392481 MTMR1Q13613 665 aa13.53□□□□□ -0.24
RFC4-202ENST00000392481 C8orf34Q49A92 452 aa13.53□□□□□ -0.24
RFC4-202ENST00000392481 REXO1Q8N1G1 1221 aaKnown RBP13.53□□□□□ -0.24
RFC4-202ENST00000392481 TMEM199Q8N511 208 aa13.53□□□□□ -0.24
RFC4-202ENST00000392481 CCDC148Q8NFR7 591 aa13.53□□□□□ -0.24
RFC4-202ENST00000392481 BICD2Q8TD16 824 aa13.53□□□□□ -0.24
RFC4-202ENST00000392481 PGBD1Q96JS3 809 aa13.53□□□□□ -0.24
RFC4-202ENST00000392481 NOC4LQ9BVI4 516 aaKnown RBP13.53□□□□□ -0.24
RFC4-202ENST00000392481 PPP1R12CQ9BZL4 782 aa13.53□□□□□ -0.24
RFC4-202ENST00000392481 SLKQ9H2G2 1235 aaPredicted RBP13.53□□□□□ -0.24
RFC4-202ENST00000392481 TMEM260Q9NX78 707 aa13.53□□□□□ -0.24
RFC4-202ENST00000392481 TPCN1Q9ULQ1 816 aa13.53□□□□□ -0.24
RFC4-202ENST00000392481 HAS3O00219 553 aa13.52□□□□□ -0.25
RFC4-202ENST00000392481 PFKFB2O60825 505 aa13.52□□□□□ -0.25
RFC4-202ENST00000392481 CDKL5O76039 1030 aa13.52□□□□□ -0.25
RFC4-202ENST00000392481 DEXIO95424 95 aa13.52□□□□□ -0.25
RFC4-202ENST00000392481 KCNA2P16389 499 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 280.4 ms