RNA–Protein interactions for RNA: ENST00000391827.2

NLRP3-205, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-205ENST00000391827 COL2A1P02458 1487 aaPredicted RBP11.99□□□□□ -0.49
NLRP3-205ENST00000391827 ERICH4A6NGS2 130 aa11.99□□□□□ -0.49
NLRP3-205ENST00000391827 SLC16A2P36021 539 aa11.99□□□□□ -0.49
NLRP3-205ENST00000391827 MARSP56192 900 aaKnown RBP11.99□□□□□ -0.49
NLRP3-205ENST00000391827 COASYQ13057 564 aa11.99□□□□□ -0.49
NLRP3-205ENST00000391827 QRICH1Q2TAL8 776 aa11.99□□□□□ -0.49
NLRP3-205ENST00000391827 STRIP1Q5VSL9 837 aa11.99□□□□□ -0.49
NLRP3-205ENST00000391827 KCTD1Q719H9 257 aa11.99□□□□□ -0.49
NLRP3-205ENST00000391827 KIAA1328Q86T90 577 aa11.99□□□□□ -0.49
NLRP3-205ENST00000391827 MYOCDQ8IZQ8 938 aa11.99□□□□□ -0.49
NLRP3-205ENST00000391827 ZNF622Q969S3 477 aaKnown RBP eCLIP11.99□□□□□ -0.49
NLRP3-205ENST00000391827 PNKPQ96T60 521 aa11.99□□□□□ -0.49
NLRP3-205ENST00000391827 GBP3Q9H0R5 595 aa11.99□□□□□ -0.49
NLRP3-205ENST00000391827 TMX4Q9H1E5 349 aaPredicted RBP11.99□□□□□ -0.49
NLRP3-205ENST00000391827 ZSWIM4Q9H7M6 989 aa11.99□□□□□ -0.49
NLRP3-205ENST00000391827 MPHOSPH10O00566 681 aaKnown RBP11.98□□□□□ -0.49
NLRP3-205ENST00000391827 NKRFO15226 690 aaKnown RBP eCLIP11.98□□□□□ -0.49
NLRP3-205ENST00000391827 ZC3H3Q8IXZ2 948 aaKnown RBP11.98□□□□□ -0.49
NLRP3-205ENST00000391827 CEP63Q96MT8 703 aa11.98□□□□□ -0.49
NLRP3-205ENST00000391827 QTRT2Q9H974 415 aaKnown RBP11.98□□□□□ -0.49
NLRP3-205ENST00000391827 PI4KBQ9UBF8 816 aa11.98□□□□□ -0.49
NLRP3-205ENST00000391827 PCDHA2Q9Y5H9 948 aa11.98□□□□□ -0.49
NLRP3-205ENST00000391827 SAR1BQ9Y6B6 198 aa11.98□□□□□ -0.49
NLRP3-205ENST00000391827 TBX3O15119 743 aa11.98□□□□□ -0.49
NLRP3-205ENST00000391827 FKBP3Q00688 224 aaKnown RBP11.98□□□□□ -0.49
NLRP3-205ENST00000391827 SLFN12Q8IYM2 578 aa11.98□□□□□ -0.49
NLRP3-205ENST00000391827 GMCL1P1Q8NEA9 526 aa11.98□□□□□ -0.49
NLRP3-205ENST00000391827 FLAD1Q8NFF5 587 aa11.98□□□□□ -0.49
NLRP3-205ENST00000391827 EEF2KMTQ96G04 330 aa11.98□□□□□ -0.49
NLRP3-205ENST00000391827 PCMTD1Q96MG8 357 aaPredicted RBP11.98□□□□□ -0.49
NLRP3-205ENST00000391827 LACRTQ9GZZ8 138 aa11.98□□□□□ -0.49
NLRP3-205ENST00000391827 PITPNM2Q9BZ72 1349 aa11.98□□□□□ -0.49
NLRP3-205ENST00000391827 FRMD3A2A2Y4 597 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 RCCD1A6NED2 376 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 EEF2P13639 858 aaKnown RBP11.97□□□□□ -0.49
NLRP3-205ENST00000391827 IDEP14735 1019 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 CKAP4Q07065 602 aaKnown RBP11.97□□□□□ -0.49
NLRP3-205ENST00000391827 FAM26FQ5R3K3 315 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 COL23A1Q86Y22 540 aaPredicted RBP11.97□□□□□ -0.49
NLRP3-205ENST00000391827 ZFPM1Q8IX07 1006 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 GMCL1Q96IK5 515 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 CCDC42Q96M95 316 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 ANO3Q9BYT9 981 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 BMP2KQ9NSY1 1161 aaPredicted RBP11.97□□□□□ -0.49
NLRP3-205ENST00000391827 SYNPO2Q9UMS6 1093 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 L1RE1Q9UN81 338 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 PCDHA1Q9Y5I3 950 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 ZNF263O14978 683 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 GNA14O95837 355 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 ATP1A1P05023 1023 aaKnown RBP11.97□□□□□ -0.49
NLRP3-205ENST00000391827 SLC1A4P43007 532 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 KIF5AQ12840 1032 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 SMC1AQ14683 1233 aaKnown RBP11.97□□□□□ -0.49
NLRP3-205ENST00000391827 CDC37Q16543 378 aaPredicted RBP11.97□□□□□ -0.49
NLRP3-205ENST00000391827 CERKLQ49MI3 558 aaPredicted RBP11.97□□□□□ -0.49
NLRP3-205ENST00000391827 DACT2Q5SW24 774 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 TMEM179Q6ZVK1 233 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 HDXQ7Z353 690 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 BAP1Q92560 729 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 PANK4Q9NVE7 773 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 ARHGAP20Q9P2F6 1191 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 FAM198AQ9UFP1 575 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 STK24Q9Y6E0 443 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 ATRNL1Q5VV63 1379 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 G3V3G9 751 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 MEIS2O14770 477 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 PLSCR1O15162 318 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 SPA17Q15506 151 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 Q4G0T1 1027 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 DCAF8Q5TAQ9 597 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 SLFN13Q68D06 897 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 SIAH1Q8IUQ4 282 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 CCDC65Q8IXS2 484 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 SYN2Q92777 582 aaPredicted RBP11.97□□□□□ -0.49
NLRP3-205ENST00000391827 NUCKS1Q9H1E3 243 aaKnown RBP11.97□□□□□ -0.49
NLRP3-205ENST00000391827 SERPINA10Q9UK55 444 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 COL4A3BPQ9Y5P4 624 aa11.97□□□□□ -0.49
NLRP3-205ENST00000391827 TARSL2A2RTX5 802 aaKnown RBP11.96□□□□□ -0.49
NLRP3-205ENST00000391827 DDTLA6NHG4 134 aaPredicted RBP11.96□□□□□ -0.49
NLRP3-205ENST00000391827 EPHB6O15197 1021 aa11.96□□□□□ -0.49
NLRP3-205ENST00000391827 TFRCP02786 760 aaKnown RBP11.96□□□□□ -0.49
NLRP3-205ENST00000391827 MCM3P25205 808 aa11.96□□□□□ -0.49
NLRP3-205ENST00000391827 SPIRE1Q08AE8 756 aa11.96□□□□□ -0.49
NLRP3-205ENST00000391827 NCAPH2Q6IBW4 605 aa11.96□□□□□ -0.49
NLRP3-205ENST00000391827 SH3BP5LQ7L8J4 393 aa11.96□□□□□ -0.49
NLRP3-205ENST00000391827 NOA1Q8NC60 698 aaKnown RBP11.96□□□□□ -0.49
NLRP3-205ENST00000391827 TRIM58Q8NG06 486 aa11.96□□□□□ -0.49
NLRP3-205ENST00000391827 ATAD5Q96QE3 1844 aa11.96□□□□□ -0.5
NLRP3-205ENST00000391827 SSU72P8A0A1W2PR75 194 aa11.96□□□□□ -0.5
NLRP3-205ENST00000391827 PJA2O43164 708 aa11.96□□□□□ -0.5
NLRP3-205ENST00000391827 MARCH6O60337 910 aa11.96□□□□□ -0.5
NLRP3-205ENST00000391827 PLA2G4BP0C869 781 aa11.96□□□□□ -0.5
NLRP3-205ENST00000391827 PRLRP16471 622 aa11.96□□□□□ -0.5
NLRP3-205ENST00000391827 USP14P54578 494 aa11.96□□□□□ -0.5
NLRP3-205ENST00000391827 ATP2B2Q01814 1243 aa11.96□□□□□ -0.5
NLRP3-205ENST00000391827 ASTE1Q2TB18 679 aaPredicted RBP11.96□□□□□ -0.5
NLRP3-205ENST00000391827 HAUS3Q68CZ6 603 aa11.96□□□□□ -0.5
NLRP3-205ENST00000391827 PPP4R3CPQ6ZMV5 832 aa11.96□□□□□ -0.5
NLRP3-205ENST00000391827 ZNF572Q7Z3I7 529 aaPredicted RBP11.96□□□□□ -0.5
NLRP3-205ENST00000391827 KCTD17Q8N5Z5 321 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms