RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 CFAP73A6NFT4 308 aa17.46■□□□□ 0.39
SHANK1-204ENST00000391814 SORBS3O60504 671 aa17.46■□□□□ 0.39
SHANK1-204ENST00000391814 ATG16L1Q676U5 607 aa17.46■□□□□ 0.39
SHANK1-204ENST00000391814 DTNBP1Q96EV8 351 aa17.46■□□□□ 0.39
SHANK1-204ENST00000391814 CCDC195A0A1B0GUA6 201 aa17.46■□□□□ 0.39
SHANK1-204ENST00000391814 CFBP00751 764 aa17.46■□□□□ 0.39
SHANK1-204ENST00000391814 CA4P22748 312 aa17.46■□□□□ 0.39
SHANK1-204ENST00000391814 SPARCL1Q14515 664 aa17.46■□□□□ 0.39
SHANK1-204ENST00000391814 KRT31Q15323 416 aa17.46■□□□□ 0.39
SHANK1-204ENST00000391814 NUDCD1Q96RS6 583 aa17.46■□□□□ 0.39
SHANK1-204ENST00000391814 SYCP2Q9BX26 1530 aa17.46■□□□□ 0.39
SHANK1-204ENST00000391814 ZBTB41Q5SVQ8 909 aa17.46■□□□□ 0.39
SHANK1-204ENST00000391814 C10orf76Q5T2E6 689 aa17.46■□□□□ 0.39
SHANK1-204ENST00000391814 TGS1Q96RS0 853 aaKnown RBP17.46■□□□□ 0.39
SHANK1-204ENST00000391814 TFCP2L1Q9NZI6 479 aa17.46■□□□□ 0.39
SHANK1-204ENST00000391814 LRRN2O75325 713 aa17.46■□□□□ 0.39
SHANK1-204ENST00000391814 STAT2P52630 851 aa17.46■□□□□ 0.39
SHANK1-204ENST00000391814 DEUP1Q05D60 604 aa17.46■□□□□ 0.39
SHANK1-204ENST00000391814 KIAA2013Q8IYS2 634 aa17.46■□□□□ 0.39
SHANK1-204ENST00000391814 SEPT8Q92599 483 aa17.46■□□□□ 0.39
SHANK1-204ENST00000391814 C8orf37Q96NL8 207 aa17.46■□□□□ 0.39
SHANK1-204ENST00000391814 TRIM15Q9C019 465 aa17.46■□□□□ 0.39
SHANK1-204ENST00000391814 PCDHA12Q9UN75 941 aa17.46■□□□□ 0.39
SHANK1-204ENST00000391814 BASP1P80723 227 aaKnown RBP17.46■□□□□ 0.38
SHANK1-204ENST00000391814 CDR2Q01850 454 aa17.46■□□□□ 0.38
SHANK1-204ENST00000391814 GLE1Q53GS7 698 aaKnown RBP17.46■□□□□ 0.38
SHANK1-204ENST00000391814 TMEM154Q6P9G4 183 aa17.46■□□□□ 0.38
SHANK1-204ENST00000391814 ZNF473Q8WTR7 871 aaKnown RBP17.46■□□□□ 0.38
SHANK1-204ENST00000391814 MLXIPQ9HAP2 919 aa17.46■□□□□ 0.38
SHANK1-204ENST00000391814 METTL14Q9HCE5 456 aaKnown RBP17.46■□□□□ 0.38
SHANK1-204ENST00000391814 ABHD10Q9NUJ1 306 aa17.46■□□□□ 0.38
SHANK1-204ENST00000391814 CD109Q6YHK3 1445 aa17.46■□□□□ 0.38
SHANK1-204ENST00000391814 NCK2O43639 380 aa17.45■□□□□ 0.38
SHANK1-204ENST00000391814 GOLGA8HP0CJ92 632 aa17.45■□□□□ 0.38
SHANK1-204ENST00000391814 MFAP3P55082 362 aa17.45■□□□□ 0.38
SHANK1-204ENST00000391814 CACNB1Q02641 598 aaPredicted RBP17.45■□□□□ 0.38
SHANK1-204ENST00000391814 LRRC14Q15048 493 aa17.45■□□□□ 0.38
SHANK1-204ENST00000391814 FAM26FQ5R3K3 315 aa17.45■□□□□ 0.38
SHANK1-204ENST00000391814 MAPKAPK5Q8IW41 473 aa17.45■□□□□ 0.38
SHANK1-204ENST00000391814 GJA10Q969M2 543 aa17.45■□□□□ 0.38
SHANK1-204ENST00000391814 TTC17Q96AE7 1141 aa17.45■□□□□ 0.38
SHANK1-204ENST00000391814 FAM161BQ96MY7 647 aa17.45■□□□□ 0.38
SHANK1-204ENST00000391814 TRAF3IP3Q9Y228 551 aa17.45■□□□□ 0.38
SHANK1-204ENST00000391814 GPATCH8Q9UKJ3 1502 aaKnown RBP17.45■□□□□ 0.38
SHANK1-204ENST00000391814 FOXD4Q12950 439 aaPredicted RBP17.45■□□□□ 0.38
SHANK1-204ENST00000391814 GCKRQ14397 625 aa17.45■□□□□ 0.38
SHANK1-204ENST00000391814 ICA1LQ8NDH6 482 aa17.45■□□□□ 0.38
SHANK1-204ENST00000391814 GINM1Q9NU53 330 aa17.45■□□□□ 0.38
SHANK1-204ENST00000391814 ZNF589Q86UQ0 364 aaPredicted RBP17.45■□□□□ 0.38
SHANK1-204ENST00000391814 ATP6V1G3Q96LB4 118 aa17.45■□□□□ 0.38
SHANK1-204ENST00000391814 MED10Q9BTT4 135 aa17.45■□□□□ 0.38
SHANK1-204ENST00000391814 RCOR1Q9UKL0 485 aa17.45■□□□□ 0.38
SHANK1-204ENST00000391814 PMS2P54278 862 aa17.45■□□□□ 0.38
SHANK1-204ENST00000391814 MAP4K1Q92918 833 aa17.45■□□□□ 0.38
SHANK1-204ENST00000391814 FOXP1Q9H334 677 aaPredicted RBP17.45■□□□□ 0.38
SHANK1-204ENST00000391814 TRPC6Q9Y210 931 aa17.45■□□□□ 0.38
SHANK1-204ENST00000391814 GAS7O60861 476 aa17.45■□□□□ 0.38
SHANK1-204ENST00000391814 KCNA4P22459 653 aa17.45■□□□□ 0.38
SHANK1-204ENST00000391814 ZBED6P86452 979 aa17.45■□□□□ 0.38
SHANK1-204ENST00000391814 KIF23Q02241 960 aaPredicted RBP17.45■□□□□ 0.38
SHANK1-204ENST00000391814 SLC30A9Q6PML9 568 aa17.45■□□□□ 0.38
SHANK1-204ENST00000391814 ANKRD7Q92527 254 aa17.45■□□□□ 0.38
SHANK1-204ENST00000391814 PRMT1Q99873 361 aaKnown RBP17.45■□□□□ 0.38
SHANK1-204ENST00000391814 SUPT3HO75486 399 aa17.44■□□□□ 0.38
SHANK1-204ENST00000391814 FGGP02679 453 aa17.44■□□□□ 0.38
SHANK1-204ENST00000391814 ARHGEF25Q86VW2 580 aa17.44■□□□□ 0.38
SHANK1-204ENST00000391814 CRLF3Q8IUI8 442 aa17.44■□□□□ 0.38
SHANK1-204ENST00000391814 TRIM55Q9BYV6 548 aa17.44■□□□□ 0.38
SHANK1-204ENST00000391814 PCDHB4Q9Y5E5 795 aa17.44■□□□□ 0.38
SHANK1-204ENST00000391814 TRAPPC8Q9Y2L5 1435 aa17.44■□□□□ 0.38
SHANK1-204ENST00000391814 SYNJ2BP-COX16A0A087WUM0 186 aa17.44■□□□□ 0.38
SHANK1-204ENST00000391814 SPDYE16A6NNV3 312 aaPredicted RBP17.44■□□□□ 0.38
SHANK1-204ENST00000391814 SYF2O95926 243 aaKnown RBP17.44■□□□□ 0.38
SHANK1-204ENST00000391814 FGAP02671 866 aa17.44■□□□□ 0.38
SHANK1-204ENST00000391814 SPDYE2Q495Y8 402 aa17.44■□□□□ 0.38
SHANK1-204ENST00000391814 LPIN2Q92539 896 aa17.44■□□□□ 0.38
SHANK1-204ENST00000391814 LGR6Q9HBX8 967 aa17.44■□□□□ 0.38
SHANK1-204ENST00000391814 COX16Q9P0S2 106 aa17.44■□□□□ 0.38
SHANK1-204ENST00000391814 WARS2Q9UGM6 360 aaKnown RBP17.44■□□□□ 0.38
SHANK1-204ENST00000391814 ARMCX5Q6P1M9 558 aa17.44■□□□□ 0.38
SHANK1-204ENST00000391814 RAB44Q7Z6P3 723 aaPredicted RBP17.44■□□□□ 0.38
SHANK1-204ENST00000391814 SLFN12Q8IYM2 578 aa17.44■□□□□ 0.38
SHANK1-204ENST00000391814 SDR42E1Q8WUS8 393 aa17.44■□□□□ 0.38
SHANK1-204ENST00000391814 ANO3Q9BYT9 981 aa17.44■□□□□ 0.38
SHANK1-204ENST00000391814 ETNK1Q9HBU6 452 aa17.44■□□□□ 0.38
SHANK1-204ENST00000391814 URB2Q14146 1524 aaKnown RBP17.44■□□□□ 0.38
SHANK1-204ENST00000391814 MYO1FO00160 1098 aa17.44■□□□□ 0.38
SHANK1-204ENST00000391814 DIAPH2O60879 1101 aa17.44■□□□□ 0.38
SHANK1-204ENST00000391814 P4HA1P13674 534 aa17.44■□□□□ 0.38
SHANK1-204ENST00000391814 NR2F2P24468 414 aa17.44■□□□□ 0.38
SHANK1-204ENST00000391814 MDM2Q00987 491 aaPredicted RBP17.44■□□□□ 0.38
SHANK1-204ENST00000391814 SESTD1Q86VW0 696 aa17.44■□□□□ 0.38
SHANK1-204ENST00000391814 CCDC127Q96BQ5 260 aa17.44■□□□□ 0.38
SHANK1-204ENST00000391814 ABCC12Q96J65 1359 aa17.44■□□□□ 0.38
SHANK1-204ENST00000391814 ARHGEF9O43307 516 aa17.43■□□□□ 0.38
SHANK1-204ENST00000391814 SLC1A4P43007 532 aa17.43■□□□□ 0.38
SHANK1-204ENST00000391814 LIG4P49917 911 aa17.43■□□□□ 0.38
SHANK1-204ENST00000391814 NEK2P51955 445 aa17.43■□□□□ 0.38
SHANK1-204ENST00000391814 NFRKBQ6P4R8 1299 aa17.43■□□□□ 0.38
SHANK1-204ENST00000391814 TEX2Q8IWB9 1127 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms