RNA–Protein interactions for RNA: ENST00000391303.1

RNU1-56P-201, Transcript of RNA, U1 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU1-56P, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-56P-201ENST00000391303 GGPS1O95749 300 aa8.12□□□□□ -1.11
RNU1-56P-201ENST00000391303 CXCL10P02778 98 aa8.12□□□□□ -1.11
RNU1-56P-201ENST00000391303 GNAT1P11488 350 aa8.12□□□□□ -1.11
RNU1-56P-201ENST00000391303 MYCLP12524 364 aaPredicted RBP8.12□□□□□ -1.11
RNU1-56P-201ENST00000391303 POU3F3P20264 500 aaPredicted RBP8.12□□□□□ -1.11
RNU1-56P-201ENST00000391303 UBA1P22314 1058 aaKnown RBP8.12□□□□□ -1.11
RNU1-56P-201ENST00000391303 PTGS1P23219 599 aa8.12□□□□□ -1.11
RNU1-56P-201ENST00000391303 HOXA13P31271 388 aaPredicted RBP8.12□□□□□ -1.11
RNU1-56P-201ENST00000391303 HOXC8P31273 242 aa8.12□□□□□ -1.11
RNU1-56P-201ENST00000391303 PSEN2P49810 448 aa8.12□□□□□ -1.11
RNU1-56P-201ENST00000391303 MFSD10Q14728 455 aa8.12□□□□□ -1.11
RNU1-56P-201ENST00000391303 GRIN2CQ14957 1233 aa8.12□□□□□ -1.11
RNU1-56P-201ENST00000391303 KIAA0753Q2KHM9 967 aa8.12□□□□□ -1.11
RNU1-56P-201ENST00000391303 MCTP2Q6DN12 878 aa8.12□□□□□ -1.11
RNU1-56P-201ENST00000391303 PPP1R18Q6NYC8 613 aa8.12□□□□□ -1.11
RNU1-56P-201ENST00000391303 LRRC8DQ7L1W4 858 aa8.12□□□□□ -1.11
RNU1-56P-201ENST00000391303 OTOP2Q7RTS6 562 aa8.12□□□□□ -1.11
RNU1-56P-201ENST00000391303 NLRX1Q86UT6 975 aa8.12□□□□□ -1.11
RNU1-56P-201ENST00000391303 FANCBQ8NB91 859 aa8.12□□□□□ -1.11
RNU1-56P-201ENST00000391303 SMARCC2Q8TAQ2 1214 aa8.12□□□□□ -1.11
RNU1-56P-201ENST00000391303 MYLIPQ8WY64 445 aa8.12□□□□□ -1.11
RNU1-56P-201ENST00000391303 TNPO1Q92973 898 aaKnown RBP8.12□□□□□ -1.11
RNU1-56P-201ENST00000391303 GPRASP2Q96D09 838 aa8.12□□□□□ -1.11
RNU1-56P-201ENST00000391303 VWCEQ96DN2 955 aa8.12□□□□□ -1.11
RNU1-56P-201ENST00000391303 NEK1Q96PY6 1258 aa8.12□□□□□ -1.11
RNU1-56P-201ENST00000391303 PSTPIP2Q9H939 334 aa8.12□□□□□ -1.11
RNU1-56P-201ENST00000391303 EHMT1Q9H9B1 1298 aa8.12□□□□□ -1.11
RNU1-56P-201ENST00000391303 CXXC1Q9P0U4 656 aaPredicted RBP8.12□□□□□ -1.11
RNU1-56P-201ENST00000391303 ZNF215Q9UL58 517 aaPredicted RBP8.12□□□□□ -1.11
RNU1-56P-201ENST00000391303 TAF6LQ9Y6J9 622 aa8.12□□□□□ -1.11
RNU1-56P-201ENST00000391303 LTBP2Q14767 1821 aa8.12□□□□□ -1.11
RNU1-56P-201ENST00000391303 LAMA3Q16787 3333 aa8.12□□□□□ -1.11
RNU1-56P-201ENST00000391303 MYH4Q9Y623 1939 aa8.11□□□□□ -1.11
RNU1-56P-201ENST00000391303 CCDC196A0A1B0GTZ2 297 aa8.11□□□□□ -1.11
RNU1-56P-201ENST00000391303 H3BRB1 525 aa8.11□□□□□ -1.11
RNU1-56P-201ENST00000391303 NOP56O00567 594 aaKnown RBP8.11□□□□□ -1.11
RNU1-56P-201ENST00000391303 MEIS2O14770 477 aa8.11□□□□□ -1.11
RNU1-56P-201ENST00000391303 CDC45O75419 566 aa8.11□□□□□ -1.11
RNU1-56P-201ENST00000391303 FOSP01100 380 aaPredicted RBP8.11□□□□□ -1.11
RNU1-56P-201ENST00000391303 IRX6P78412 446 aaPredicted RBP8.11□□□□□ -1.11
RNU1-56P-201ENST00000391303 MRPS9P82933 396 aaKnown RBP8.11□□□□□ -1.11
RNU1-56P-201ENST00000391303 HSDL1Q3SXM5 330 aa8.11□□□□□ -1.11
RNU1-56P-201ENST00000391303 GDF6Q6KF10 455 aaPredicted RBP8.11□□□□□ -1.11
RNU1-56P-201ENST00000391303 CNKSR3Q6P9H4 555 aa8.11□□□□□ -1.11
RNU1-56P-201ENST00000391303 TMTC3Q6ZXV5 915 aa8.11□□□□□ -1.11
RNU1-56P-201ENST00000391303 DHX32Q7L7V1 743 aaKnown RBP8.11□□□□□ -1.11
RNU1-56P-201ENST00000391303 CHST3Q7LGC8 479 aa8.11□□□□□ -1.11
RNU1-56P-201ENST00000391303 RPAINQ86UA6 219 aa8.11□□□□□ -1.11
RNU1-56P-201ENST00000391303 SERINC5Q86VE9 423 aa8.11□□□□□ -1.11
RNU1-56P-201ENST00000391303 FCHSD1Q86WN1 690 aa8.11□□□□□ -1.11
RNU1-56P-201ENST00000391303 FBXL16Q8N461 479 aa8.11□□□□□ -1.11
RNU1-56P-201ENST00000391303 SCLYQ96I15 445 aa8.11□□□□□ -1.11
RNU1-56P-201ENST00000391303 CTAGE1Q96RT6 745 aa8.11□□□□□ -1.11
RNU1-56P-201ENST00000391303 C16orf70Q9BSU1 422 aa8.11□□□□□ -1.11
RNU1-56P-201ENST00000391303 FTOQ9C0B1 505 aaKnown RBP eCLIP8.11□□□□□ -1.11
RNU1-56P-201ENST00000391303 TUT1Q9H6E5 874 aaKnown RBP8.11□□□□□ -1.11
RNU1-56P-201ENST00000391303 SENP2Q9HC62 589 aa8.11□□□□□ -1.11
RNU1-56P-201ENST00000391303 HDAC6Q9UBN7 1215 aa8.11□□□□□ -1.11
RNU1-56P-201ENST00000391303 LRRC37A2A6NM11 1700 aa8.1□□□□□ -1.11
RNU1-56P-201ENST00000391303 SPDYE3A6NKU9 549 aa8.1□□□□□ -1.11
RNU1-56P-201ENST00000391303 ZBBXA8MT70 800 aa8.1□□□□□ -1.11
RNU1-56P-201ENST00000391303 CKBP12277 381 aa8.1□□□□□ -1.11
RNU1-56P-201ENST00000391303 PBX2P40425 430 aa8.1□□□□□ -1.11
RNU1-56P-201ENST00000391303 KCNJ6P48051 423 aa8.1□□□□□ -1.11
RNU1-56P-201ENST00000391303 EXOSC10Q01780 885 aaKnown RBP8.1□□□□□ -1.11
RNU1-56P-201ENST00000391303 TRIM71Q2Q1W2 868 aaKnown RBP8.1□□□□□ -1.11
RNU1-56P-201ENST00000391303 PPP2R2DQ66LE6 453 aa8.1□□□□□ -1.11
RNU1-56P-201ENST00000391303 APOA5Q6Q788 366 aa8.1□□□□□ -1.11
RNU1-56P-201ENST00000391303 HERC6Q8IVU3 1022 aa8.1□□□□□ -1.11
RNU1-56P-201ENST00000391303 SRBD1Q8N5C6 995 aaKnown RBP8.1□□□□□ -1.11
RNU1-56P-201ENST00000391303 IL31RAQ8NI17 732 aa8.1□□□□□ -1.11
RNU1-56P-201ENST00000391303 ATXN2LQ8WWM7 1075 aaKnown RBP8.1□□□□□ -1.11
RNU1-56P-201ENST00000391303 TSPYL2Q9H2G4 693 aaPredicted RBP8.1□□□□□ -1.11
RNU1-56P-201ENST00000391303 NRCAMQ92823 1304 aa8.09□□□□□ -1.11
RNU1-56P-201ENST00000391303 PLXNA1Q9UIW2 1896 aa8.09□□□□□ -1.11
RNU1-56P-201ENST00000391303 C17orf102A2RUQ5 167 aa8.09□□□□□ -1.11
RNU1-56P-201ENST00000391303 GRXCR1A8MXD5 290 aa8.09□□□□□ -1.11
RNU1-56P-201ENST00000391303 LGALS2P05162 132 aa8.09□□□□□ -1.11
RNU1-56P-201ENST00000391303 SP2Q02086 613 aa8.09□□□□□ -1.11
RNU1-56P-201ENST00000391303 AP3B2Q13367 1082 aa8.09□□□□□ -1.11
RNU1-56P-201ENST00000391303 IKBKEQ14164 716 aa8.09□□□□□ -1.11
RNU1-56P-201ENST00000391303 TAF2Q6P1X5 1199 aa8.09□□□□□ -1.11
RNU1-56P-201ENST00000391303 USP17L6PQ6QN14 398 aa8.09□□□□□ -1.11
RNU1-56P-201ENST00000391303 DEFB128Q7Z7B8 93 aa8.09□□□□□ -1.11
RNU1-56P-201ENST00000391303 SEPT1Q8WYJ6 367 aa8.09□□□□□ -1.11
RNU1-56P-201ENST00000391303 DHX38Q92620 1227 aaKnown RBP8.09□□□□□ -1.11
RNU1-56P-201ENST00000391303 APBB2Q92870 758 aa8.09□□□□□ -1.11
RNU1-56P-201ENST00000391303 KCNB2Q92953 911 aa8.09□□□□□ -1.11
RNU1-56P-201ENST00000391303 ATP6V0A1Q93050 837 aa8.09□□□□□ -1.11
RNU1-56P-201ENST00000391303 GPR20Q99678 358 aa8.09□□□□□ -1.11
RNU1-56P-201ENST00000391303 NKX2-4Q9H2Z4 354 aa8.09□□□□□ -1.11
RNU1-56P-201ENST00000391303 LMCD1Q9NZU5 365 aa8.09□□□□□ -1.11
RNU1-56P-201ENST00000391303 YBX2Q9Y2T7 364 aaKnown RBP8.09□□□□□ -1.11
RNU1-56P-201ENST00000391303 UBIAD1Q9Y5Z9 338 aa8.09□□□□□ -1.11
RNU1-56P-201ENST00000391303 LAMA4Q16363 1823 aa8.08□□□□□ -1.12
RNU1-56P-201ENST00000391303 ESYT2A0FGR8 921 aa8.08□□□□□ -1.12
RNU1-56P-201ENST00000391303 RSPH10B2B2RC85 870 aa8.08□□□□□ -1.12
RNU1-56P-201ENST00000391303 ZBTB43O43298 467 aa8.08□□□□□ -1.12
RNU1-56P-201ENST00000391303 GTPBP6O43824 516 aaPredicted RBP8.08□□□□□ -1.12
RNU1-56P-201ENST00000391303 LGR5O75473 907 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms