RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 TNIP1Q15025 636 aa15.58■□□□□ 0.08
RTF1-201ENST00000389629 CCDC174Q6PII3 467 aa15.58■□□□□ 0.08
RTF1-201ENST00000389629 CAPN12Q6ZSI9 719 aa15.58■□□□□ 0.08
RTF1-201ENST00000389629 ARMC9Q7Z3E5 817 aa15.58■□□□□ 0.08
RTF1-201ENST00000389629 RDH13Q8NBN7 331 aa15.58■□□□□ 0.08
RTF1-201ENST00000389629 EHD4Q9H223 541 aa15.58■□□□□ 0.08
RTF1-201ENST00000389629 DAAM1Q9Y4D1 1078 aa15.58■□□□□ 0.08
RTF1-201ENST00000389629 ANKRD26Q9UPS8 1709 aa15.58■□□□□ 0.08
RTF1-201ENST00000389629 MYCNP04198 464 aaPredicted RBP15.58■□□□□ 0.08
RTF1-201ENST00000389629 XRCC5P13010 732 aaKnown RBP15.58■□□□□ 0.08
RTF1-201ENST00000389629 PLCG2P16885 1265 aa15.58■□□□□ 0.08
RTF1-201ENST00000389629 STAT1P42224 750 aa15.58■□□□□ 0.08
RTF1-201ENST00000389629 PROCA1Q8NCQ7 364 aaPredicted RBP15.58■□□□□ 0.08
RTF1-201ENST00000389629 KCNV2Q8TDN2 545 aa15.58■□□□□ 0.08
RTF1-201ENST00000389629 CEP63Q96MT8 703 aa15.58■□□□□ 0.08
RTF1-201ENST00000389629 GBP5Q96PP8 586 aa15.58■□□□□ 0.08
RTF1-201ENST00000389629 EHD2Q9NZN4 543 aa15.58■□□□□ 0.08
RTF1-201ENST00000389629 GCNT3O95395 438 aa15.57■□□□□ 0.08
RTF1-201ENST00000389629 MMEP08473 750 aa15.57■□□□□ 0.08
RTF1-201ENST00000389629 FYB2Q5VWT5 728 aa15.57■□□□□ 0.08
RTF1-201ENST00000389629 KIRREL3Q8IZU9 778 aa15.57■□□□□ 0.08
RTF1-201ENST00000389629 SAAL1Q96ER3 474 aa15.57■□□□□ 0.08
RTF1-201ENST00000389629 PCDHA12Q9UN75 941 aa15.57■□□□□ 0.08
RTF1-201ENST00000389629 A0A1W2PQC6 194 aa15.57■□□□□ 0.08
RTF1-201ENST00000389629 LUC7L3O95232 432 aaKnown RBP15.57■□□□□ 0.08
RTF1-201ENST00000389629 DYNLL2Q96FJ2 89 aa15.57■□□□□ 0.08
RTF1-201ENST00000389629 RAB3IPQ96QF0 476 aaPredicted RBP15.57■□□□□ 0.08
RTF1-201ENST00000389629 ATP8A2Q9NTI2 1148 aa15.57■□□□□ 0.08
RTF1-201ENST00000389629 NOP53Q9NZM5 478 aaKnown RBP15.57■□□□□ 0.08
RTF1-201ENST00000389629 A0A0U1RQJ8 604 aa15.57■□□□□ 0.08
RTF1-201ENST00000389629 USP17L8P0C7I0 530 aa15.57■□□□□ 0.08
RTF1-201ENST00000389629 CYP2D6P10635 497 aa15.57■□□□□ 0.08
RTF1-201ENST00000389629 ARL8AQ96BM9 186 aa15.57■□□□□ 0.08
RTF1-201ENST00000389629 ZIM3Q96PE6 472 aa15.57■□□□□ 0.08
RTF1-201ENST00000389629 GGT7Q9UJ14 662 aa15.57■□□□□ 0.08
RTF1-201ENST00000389629 MDH1P40925 334 aaKnown RBP15.57■□□□□ 0.08
RTF1-201ENST00000389629 FKBP3Q00688 224 aaKnown RBP15.57■□□□□ 0.08
RTF1-201ENST00000389629 TBX2Q13207 712 aaPredicted RBP15.57■□□□□ 0.08
RTF1-201ENST00000389629 HAUS3Q68CZ6 603 aa15.57■□□□□ 0.08
RTF1-201ENST00000389629 TMC4Q7Z404 712 aa15.57■□□□□ 0.08
RTF1-201ENST00000389629 TEX2Q8IWB9 1127 aa15.57■□□□□ 0.08
RTF1-201ENST00000389629 OR2W6PQ8NHA6 318 aa15.57■□□□□ 0.08
RTF1-201ENST00000389629 DDX12PQ92771 950 aa15.57■□□□□ 0.08
RTF1-201ENST00000389629 FRMD4BQ9Y2L6 1034 aa15.57■□□□□ 0.08
RTF1-201ENST00000389629 CDHR2Q9BYE9 1310 aa15.57■□□□□ 0.08
RTF1-201ENST00000389629 CHMP2AO43633 222 aa15.56■□□□□ 0.08
RTF1-201ENST00000389629 RPS8P62241 208 aaKnown RBP15.56■□□□□ 0.08
RTF1-201ENST00000389629 PFKFB3Q16875 520 aaPredicted RBP15.56■□□□□ 0.08
RTF1-201ENST00000389629 PIGBQ92521 554 aa15.56■□□□□ 0.08
RTF1-201ENST00000389629 FMO2Q99518 471 aa15.56■□□□□ 0.08
RTF1-201ENST00000389629 NYXQ9GZU5 481 aa15.56■□□□□ 0.08
RTF1-201ENST00000389629 POLE2P56282 527 aa15.56■□□□□ 0.08
RTF1-201ENST00000389629 RASIP1Q5U651 963 aa15.56■□□□□ 0.08
RTF1-201ENST00000389629 GDAP1Q8TB36 358 aa15.56■□□□□ 0.08
RTF1-201ENST00000389629 RNPC3Q96LT9 517 aaKnown RBP15.56■□□□□ 0.08
RTF1-201ENST00000389629 DDX47Q9H0S4 455 aaKnown RBP15.56■□□□□ 0.08
RTF1-201ENST00000389629 CPVLQ9H3G5 476 aa15.56■□□□□ 0.08
RTF1-201ENST00000389629 INTS13Q9NVM9 706 aa15.56■□□□□ 0.08
RTF1-201ENST00000389629 USP17L3A6NCW0 530 aa15.56■□□□□ 0.08
RTF1-201ENST00000389629 USP17L4A6NCW7 530 aa15.56■□□□□ 0.08
RTF1-201ENST00000389629 GLE1Q53GS7 698 aaKnown RBP15.56■□□□□ 0.08
RTF1-201ENST00000389629 USP17L1Q7RTZ2 530 aa15.56■□□□□ 0.08
RTF1-201ENST00000389629 WDR66Q8TBY9 1149 aa15.56■□□□□ 0.08
RTF1-201ENST00000389629 PHF20Q9BVI0 1012 aa15.56■□□□□ 0.08
RTF1-201ENST00000389629 FAM114A2Q9NRY5 505 aa15.56■□□□□ 0.08
RTF1-201ENST00000389629 DNM3Q9UQ16 869 aa15.56■□□□□ 0.08
RTF1-201ENST00000389629 PSMD14O00487 310 aa15.56■□□□□ 0.08
RTF1-201ENST00000389629 FCER1AP12319 257 aa15.56■□□□□ 0.08
RTF1-201ENST00000389629 HDLBPQ00341 1268 aaKnown RBP15.56■□□□□ 0.08
RTF1-201ENST00000389629 TRIM4Q9C037 500 aa15.56■□□□□ 0.08
RTF1-201ENST00000389629 NT5C3AQ9H0P0 336 aa15.56■□□□□ 0.08
RTF1-201ENST00000389629 MLXIPLQ9NP71 852 aa15.56■□□□□ 0.08
RTF1-201ENST00000389629 COL4A3BPQ9Y5P4 624 aa15.56■□□□□ 0.08
RTF1-201ENST00000389629 PLEKHG2Q9H7P9 1386 aa15.55■□□□□ 0.08
RTF1-201ENST00000389629 TMOD1P28289 359 aa15.55■□□□□ 0.08
RTF1-201ENST00000389629 CARSP49589 748 aaKnown RBP15.55■□□□□ 0.08
RTF1-201ENST00000389629 CCDC13Q8IYE1 715 aa15.55■□□□□ 0.08
RTF1-201ENST00000389629 HPS3Q969F9 1004 aa15.55■□□□□ 0.08
RTF1-201ENST00000389629 DUSP10Q9Y6W6 482 aa15.55■□□□□ 0.08
RTF1-201ENST00000389629 RFC4P35249 363 aa15.55■□□□□ 0.08
RTF1-201ENST00000389629 KLK7P49862 253 aa15.55■□□□□ 0.08
RTF1-201ENST00000389629 PPP2R2AP63151 447 aa15.55■□□□□ 0.08
RTF1-201ENST00000389629 NUGGCQ68CJ6 796 aa15.55■□□□□ 0.08
RTF1-201ENST00000389629 WDR93Q6P2C0 686 aa15.55■□□□□ 0.08
RTF1-201ENST00000389629 CNOT10Q9H9A5 744 aaKnown RBP15.55■□□□□ 0.08
RTF1-201ENST00000389629 ENO4A6NNW6 628 aa15.55■□□□□ 0.08
RTF1-201ENST00000389629 PHF20L1A8MW92 1017 aa15.55■□□□□ 0.08
RTF1-201ENST00000389629 RCAN1P53805 252 aa15.55■□□□□ 0.08
RTF1-201ENST00000389629 SUSD4Q5VX71 490 aa15.55■□□□□ 0.08
RTF1-201ENST00000389629 ELOA2Q8IYF1 753 aaPredicted RBP15.55■□□□□ 0.08
RTF1-201ENST00000389629 ADSSL1Q8N142 457 aa15.55■□□□□ 0.08
RTF1-201ENST00000389629 TBK1Q9UHD2 729 aa15.55■□□□□ 0.08
RTF1-201ENST00000389629 H0Y3Z8 333 aa15.55■□□□□ 0.08
RTF1-201ENST00000389629 TXNDC9O14530 226 aa15.55■□□□□ 0.08
RTF1-201ENST00000389629 MAP2K7O14733 419 aa15.55■□□□□ 0.08
RTF1-201ENST00000389629 GNPTABQ3T906 1256 aa15.55■□□□□ 0.08
RTF1-201ENST00000389629 ANKRD40Q6AI12 368 aa15.55■□□□□ 0.08
RTF1-201ENST00000389629 LRRC47Q8N1G4 583 aaKnown RBP15.55■□□□□ 0.08
RTF1-201ENST00000389629 SRBD1Q8N5C6 995 aaKnown RBP15.55■□□□□ 0.08
RTF1-201ENST00000389629 SLC40A1Q9NP59 571 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms