RNA–Protein interactions for RNA: ENST00000389301.7

FANCA-202, Transcript of FA complementation group A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FANCA, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-202ENST00000389301 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.55□□□□□ -0.24
FANCA-202ENST00000389301 ZNF518AQ6AHZ1 1483 aa13.55□□□□□ -0.24
FANCA-202ENST00000389301 TMEM232C9JQI7 657 aa13.55□□□□□ -0.24
FANCA-202ENST00000389301 CPP00450 1065 aa13.55□□□□□ -0.24
FANCA-202ENST00000389301 PLS3P13797 630 aa13.55□□□□□ -0.24
FANCA-202ENST00000389301 ADORA1P30542 326 aa13.55□□□□□ -0.24
FANCA-202ENST00000389301 CCDC138Q96M89 665 aa13.55□□□□□ -0.24
FANCA-202ENST00000389301 YY1AP1Q9H869 796 aa13.55□□□□□ -0.24
FANCA-202ENST00000389301 PACSIN2Q9UNF0 486 aaPredicted RBP13.55□□□□□ -0.24
FANCA-202ENST00000389301 SRPRBQ9Y5M8 271 aaKnown RBP13.55□□□□□ -0.24
FANCA-202ENST00000389301 CAPN9O14815 690 aa13.55□□□□□ -0.24
FANCA-202ENST00000389301 ACSL3O95573 720 aa13.55□□□□□ -0.24
FANCA-202ENST00000389301 KRT1P04264 644 aa13.55□□□□□ -0.24
FANCA-202ENST00000389301 CCNE1P24864 410 aa13.55□□□□□ -0.24
FANCA-202ENST00000389301 ITKQ08881 620 aa13.55□□□□□ -0.24
FANCA-202ENST00000389301 GRAMD1BQ3KR37 738 aa13.55□□□□□ -0.24
FANCA-202ENST00000389301 MCUQ8NE86 351 aa13.55□□□□□ -0.24
FANCA-202ENST00000389301 POMGNT1Q8WZA1 660 aa13.55□□□□□ -0.24
FANCA-202ENST00000389301 CCDC87Q9NVE4 849 aa13.55□□□□□ -0.24
FANCA-202ENST00000389301 DNAJC17Q9NVM6 304 aaKnown RBP13.55□□□□□ -0.24
FANCA-202ENST00000389301 PCDHB6Q9Y5E3 794 aa13.55□□□□□ -0.24
FANCA-202ENST00000389301 PCDHB4Q9Y5E5 795 aa13.55□□□□□ -0.24
FANCA-202ENST00000389301 DNMT1P26358 1616 aaKnown RBP13.55□□□□□ -0.24
FANCA-202ENST00000389301 DMP1Q13316 513 aaPredicted RBP13.55□□□□□ -0.24
FANCA-202ENST00000389301 SEPT2Q15019 361 aa13.55□□□□□ -0.24
FANCA-202ENST00000389301 BEND6Q5SZJ8 279 aaPredicted RBP13.55□□□□□ -0.24
FANCA-202ENST00000389301 TRIM11Q96F44 468 aa13.55□□□□□ -0.24
FANCA-202ENST00000389301 MED10Q9BTT4 135 aa13.55□□□□□ -0.24
FANCA-202ENST00000389301 EFHD1Q9BUP0 239 aa13.55□□□□□ -0.24
FANCA-202ENST00000389301 GCNT4Q9P109 453 aa13.55□□□□□ -0.24
FANCA-202ENST00000389301 MAST1Q9Y2H9 1570 aa13.55□□□□□ -0.24
FANCA-202ENST00000389301 CA4P22748 312 aa13.54□□□□□ -0.24
FANCA-202ENST00000389301 BPIFB4P59827 614 aa13.54□□□□□ -0.24
FANCA-202ENST00000389301 NBPF9Q3BBW0 867 aa13.54□□□□□ -0.24
FANCA-202ENST00000389301 PITPNM3Q9BZ71 974 aa13.54□□□□□ -0.24
FANCA-202ENST00000389301 ESYT2A0FGR8 921 aa13.54□□□□□ -0.24
FANCA-202ENST00000389301 CLIC2O15247 247 aa13.54□□□□□ -0.24
FANCA-202ENST00000389301 SORBS3O60504 671 aa13.54□□□□□ -0.24
FANCA-202ENST00000389301 LMNAP02545 664 aaKnown RBP13.54□□□□□ -0.24
FANCA-202ENST00000389301 PDHA1P08559 390 aa13.54□□□□□ -0.24
FANCA-202ENST00000389301 POLR2MP0CAP2 368 aa13.54□□□□□ -0.24
FANCA-202ENST00000389301 MAP7D3Q8IWC1 876 aa13.54□□□□□ -0.24
FANCA-202ENST00000389301 CEP70Q8NHQ1 597 aa13.54□□□□□ -0.24
FANCA-202ENST00000389301 KCNV2Q8TDN2 545 aa13.54□□□□□ -0.24
FANCA-202ENST00000389301 COPRSQ9NQ92 184 aa13.54□□□□□ -0.24
FANCA-202ENST00000389301 USP40Q9NVE5 1235 aa13.54□□□□□ -0.24
FANCA-202ENST00000389301 STK17AQ9UEE5 414 aa13.54□□□□□ -0.24
FANCA-202ENST00000389301 GNGT2O14610 69 aa13.54□□□□□ -0.24
FANCA-202ENST00000389301 CREB3O43889 395 aa13.54□□□□□ -0.24
FANCA-202ENST00000389301 NCF2P19878 526 aaPredicted RBP13.54□□□□□ -0.24
FANCA-202ENST00000389301 EEF1B2P24534 225 aaKnown RBP13.54□□□□□ -0.24
FANCA-202ENST00000389301 KDM5AP29375 1690 aaKnown RBP13.54□□□□□ -0.24
FANCA-202ENST00000389301 DYNLT1P63172 113 aa13.54□□□□□ -0.24
FANCA-202ENST00000389301 GLE1Q53GS7 698 aaKnown RBP13.54□□□□□ -0.24
FANCA-202ENST00000389301 NUB1Q9Y5A7 615 aa13.54□□□□□ -0.24
FANCA-202ENST00000389301 MYOM2P54296 1465 aa13.54□□□□□ -0.24
FANCA-202ENST00000389301 CFLARO15519 480 aa13.54□□□□□ -0.24
FANCA-202ENST00000389301 DCTN3O75935 186 aa13.54□□□□□ -0.24
FANCA-202ENST00000389301 MYL1P05976 194 aa13.54□□□□□ -0.24
FANCA-202ENST00000389301 BASP1P80723 227 aaKnown RBP13.54□□□□□ -0.24
FANCA-202ENST00000389301 KIF22Q14807 665 aa13.54□□□□□ -0.24
FANCA-202ENST00000389301 DYDC2Q96IM9 177 aa13.54□□□□□ -0.24
FANCA-202ENST00000389301 NDST4Q9H3R1 872 aa13.54□□□□□ -0.24
FANCA-202ENST00000389301 CACYBPQ9HB71 228 aaKnown RBP13.54□□□□□ -0.24
FANCA-202ENST00000389301 G3BP2Q9UN86 482 aaKnown RBP13.54□□□□□ -0.24
FANCA-202ENST00000389301 MRFAP1Q9Y605 127 aa13.54□□□□□ -0.24
FANCA-202ENST00000389301 A6NJR5 290 aa13.53□□□□□ -0.24
FANCA-202ENST00000389301 TRIML2Q8N7C3 387 aa13.53□□□□□ -0.24
FANCA-202ENST00000389301 PDLIM2Q96JY6 352 aa13.53□□□□□ -0.24
FANCA-202ENST00000389301 CSRNP1Q96S65 589 aa13.53□□□□□ -0.24
FANCA-202ENST00000389301 MIS12Q9H081 205 aa13.53□□□□□ -0.24
FANCA-202ENST00000389301 PLXNC1O60486 1568 aa13.53□□□□□ -0.24
FANCA-202ENST00000389301 KCNA6P17658 529 aa13.53□□□□□ -0.24
FANCA-202ENST00000389301 EEF1DP29692 281 aaKnown RBP13.53□□□□□ -0.24
FANCA-202ENST00000389301 FBXO11Q86XK2 927 aa13.53□□□□□ -0.24
FANCA-202ENST00000389301 GLG1Q92896 1179 aa13.53□□□□□ -0.24
FANCA-202ENST00000389301 FAM167BQ9BTA0 163 aa13.53□□□□□ -0.24
FANCA-202ENST00000389301 SYNJ2BP-COX16A0A087WUM0 186 aa13.53□□□□□ -0.24
FANCA-202ENST00000389301 SH2B2O14492 632 aaPredicted RBP13.53□□□□□ -0.24
FANCA-202ENST00000389301 SPAG7O75391 227 aa13.53□□□□□ -0.24
FANCA-202ENST00000389301 TMEM191BP0C7N4 346 aa13.53□□□□□ -0.24
FANCA-202ENST00000389301 SYT2Q8N9I0 419 aaPredicted RBP13.53□□□□□ -0.24
FANCA-202ENST00000389301 TRAIPQ9BWF2 469 aa13.53□□□□□ -0.24
FANCA-202ENST00000389301 COX16Q9P0S2 106 aa13.53□□□□□ -0.24
FANCA-202ENST00000389301 ANKFY1Q9P2R3 1169 aa13.53□□□□□ -0.24
FANCA-202ENST00000389301 HESX1Q9UBX0 185 aa13.53□□□□□ -0.24
FANCA-202ENST00000389301 FGGP02679 453 aa13.53□□□□□ -0.24
FANCA-202ENST00000389301 PHKA1P46020 1223 aa13.53□□□□□ -0.24
FANCA-202ENST00000389301 TTLL7Q6ZT98 887 aa13.53□□□□□ -0.24
FANCA-202ENST00000389301 ZBTB8OSQ8IWT0 167 aa13.53□□□□□ -0.24
FANCA-202ENST00000389301 PARP9Q8IXQ6 854 aa13.53□□□□□ -0.24
FANCA-202ENST00000389301 HIPK4Q8NE63 616 aa13.53□□□□□ -0.24
FANCA-202ENST00000389301 CHURC1Q8WUH1 139 aa13.53□□□□□ -0.24
FANCA-202ENST00000389301 AIFM3Q96NN9 605 aa13.53□□□□□ -0.24
FANCA-202ENST00000389301 PUS3Q9BZE2 481 aaKnown RBP13.53□□□□□ -0.24
FANCA-202ENST00000389301 FIS1Q9Y3D6 152 aa13.53□□□□□ -0.24
FANCA-202ENST00000389301 ARHGEF16Q5VV41 709 aa13.53□□□□□ -0.24
FANCA-202ENST00000389301 ARHGEF25Q86VW2 580 aa13.53□□□□□ -0.24
FANCA-202ENST00000389301 SIRT2Q8IXJ6 389 aa13.53□□□□□ -0.24
FANCA-202ENST00000389301 TBC1D22AQ8WUA7 517 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms