RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 NF2P35240 595 aa12.97□□□□□ -0.33
RAPGEF3-201ENST00000389212 USP17L24Q0WX57 530 aa12.97□□□□□ -0.33
RAPGEF3-201ENST00000389212 CNNM4Q6P4Q7 775 aa12.97□□□□□ -0.33
RAPGEF3-201ENST00000389212 USP17L6PQ6QN14 398 aa12.97□□□□□ -0.33
RAPGEF3-201ENST00000389212 C2CD5Q86YS7 1000 aa12.97□□□□□ -0.33
RAPGEF3-201ENST00000389212 ANKRD13CQ8N6S4 541 aa12.97□□□□□ -0.33
RAPGEF3-201ENST00000389212 FGFBP2Q9BYJ0 223 aa12.97□□□□□ -0.33
RAPGEF3-201ENST00000389212 ZNHIT6Q9NWK9 470 aaKnown RBP12.97□□□□□ -0.33
RAPGEF3-201ENST00000389212 GAKO14976 1311 aa12.97□□□□□ -0.33
RAPGEF3-201ENST00000389212 NPHP3-ACAD11A0A0J9YXS1 232 aa12.96□□□□□ -0.33
RAPGEF3-201ENST00000389212 CCDC189A1A4V9 331 aa12.96□□□□□ -0.33
RAPGEF3-201ENST00000389212 MYL1P05976 194 aa12.96□□□□□ -0.33
RAPGEF3-201ENST00000389212 AMPD3Q01432 767 aa12.96□□□□□ -0.33
RAPGEF3-201ENST00000389212 APBA1Q02410 837 aa12.96□□□□□ -0.33
RAPGEF3-201ENST00000389212 HSP90B2PQ58FF3 399 aa12.96□□□□□ -0.33
RAPGEF3-201ENST00000389212 C15orf52Q6ZUT6 534 aaKnown RBP12.96□□□□□ -0.33
RAPGEF3-201ENST00000389212 GSPT2Q8IYD1 628 aaKnown RBP12.96□□□□□ -0.33
RAPGEF3-201ENST00000389212 DDX12PQ92771 950 aa12.96□□□□□ -0.33
RAPGEF3-201ENST00000389212 CUEDC2Q9H467 287 aa12.96□□□□□ -0.33
RAPGEF3-201ENST00000389212 ZNF219Q9P2Y4 722 aaPredicted RBP12.96□□□□□ -0.33
RAPGEF3-201ENST00000389212 BRD3Q15059 726 aa12.96□□□□□ -0.33
RAPGEF3-201ENST00000389212 SEPT12Q8IYM1 358 aa12.96□□□□□ -0.33
RAPGEF3-201ENST00000389212 N4BP2L2Q92802 583 aaPredicted RBP12.96□□□□□ -0.33
RAPGEF3-201ENST00000389212 TANGO6Q9C0B7 1094 aa12.96□□□□□ -0.33
RAPGEF3-201ENST00000389212 HAUS4Q9H6D7 363 aa12.96□□□□□ -0.33
RAPGEF3-201ENST00000389212 MLXIPQ9HAP2 919 aa12.96□□□□□ -0.33
RAPGEF3-201ENST00000389212 WHAMMP3Q1A5X7 153 aa12.96□□□□□ -0.34
RAPGEF3-201ENST00000389212 TMEM266Q2M3C6 531 aa12.96□□□□□ -0.34
RAPGEF3-201ENST00000389212 FKBP15Q5T1M5 1219 aa12.96□□□□□ -0.34
RAPGEF3-201ENST00000389212 NELFCDQ8IXH7 590 aa12.96□□□□□ -0.34
RAPGEF3-201ENST00000389212 GJD4Q96KN9 370 aaPredicted RBP12.96□□□□□ -0.34
RAPGEF3-201ENST00000389212 POLD4Q9HCU8 107 aa12.96□□□□□ -0.34
RAPGEF3-201ENST00000389212 ZNF831Q5JPB2 1677 aa12.96□□□□□ -0.34
RAPGEF3-201ENST00000389212 PPEF1O14829 653 aaPredicted RBP12.95□□□□□ -0.34
RAPGEF3-201ENST00000389212 IPO7O95373 1038 aaKnown RBP12.95□□□□□ -0.34
RAPGEF3-201ENST00000389212 CYLC1P35663 651 aaPredicted RBP12.95□□□□□ -0.34
RAPGEF3-201ENST00000389212 ZBED6P86452 979 aa12.95□□□□□ -0.34
RAPGEF3-201ENST00000389212 GABPAQ06546 454 aa12.95□□□□□ -0.34
RAPGEF3-201ENST00000389212 ENOX2Q16206 610 aaKnown RBP12.95□□□□□ -0.34
RAPGEF3-201ENST00000389212 AP1ARQ63HQ0 302 aa12.95□□□□□ -0.34
RAPGEF3-201ENST00000389212 TRAPPC11Q7Z392 1133 aa12.95□□□□□ -0.34
RAPGEF3-201ENST00000389212 KIRREL3Q8IZU9 778 aa12.95□□□□□ -0.34
RAPGEF3-201ENST00000389212 CERKQ8TCT0 537 aa12.95□□□□□ -0.34
RAPGEF3-201ENST00000389212 UBXN6Q9BZV1 441 aa12.95□□□□□ -0.34
RAPGEF3-201ENST00000389212 ZHX3Q9H4I2 956 aa12.95□□□□□ -0.34
RAPGEF3-201ENST00000389212 JADE2Q9NQC1 790 aa12.95□□□□□ -0.34
RAPGEF3-201ENST00000389212 SMARCAL1Q9NZC9 954 aa12.95□□□□□ -0.34
RAPGEF3-201ENST00000389212 DDX25Q9UHL0 483 aaKnown RBP12.95□□□□□ -0.34
RAPGEF3-201ENST00000389212 SERPINB13Q9UIV8 391 aa12.95□□□□□ -0.34
RAPGEF3-201ENST00000389212 TAF1LQ8IZX4 1826 aa12.95□□□□□ -0.34
RAPGEF3-201ENST00000389212 BBOX1O75936 387 aa12.95□□□□□ -0.34
RAPGEF3-201ENST00000389212 ZNF543Q08ER8 600 aa12.95□□□□□ -0.34
RAPGEF3-201ENST00000389212 MEA1Q16626 185 aa12.95□□□□□ -0.34
RAPGEF3-201ENST00000389212 KRT79Q5XKE5 535 aa12.95□□□□□ -0.34
RAPGEF3-201ENST00000389212 SLF2Q8IX21 1173 aa12.95□□□□□ -0.34
RAPGEF3-201ENST00000389212 MSANTD4Q8NCY6 345 aa12.95□□□□□ -0.34
RAPGEF3-201ENST00000389212 CAGE1Q8TC20 777 aa12.95□□□□□ -0.34
RAPGEF3-201ENST00000389212 NOC3LQ8WTT2 800 aaKnown RBP12.95□□□□□ -0.34
RAPGEF3-201ENST00000389212 CCDC42Q96M95 316 aa12.95□□□□□ -0.34
RAPGEF3-201ENST00000389212 NDST4Q9H3R1 872 aa12.95□□□□□ -0.34
RAPGEF3-201ENST00000389212 SAR1BQ9Y6B6 198 aa12.95□□□□□ -0.34
RAPGEF3-201ENST00000389212 E9PMD0 336 aa12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 PDE2AO00408 941 aaPredicted RBP12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 SHMT1P34896 483 aa12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 STAT3P40763 770 aa12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 CENPPQ6IPU0 288 aa12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 UNC13DQ70J99 1090 aa12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 RRAGAQ7L523 313 aa12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 CEP57Q86XR8 500 aa12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 FAM114A1Q8IWE2 563 aa12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 TBC1D22AQ8WUA7 517 aa12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 RAD54LQ92698 747 aa12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 HAS1Q92839 578 aa12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 FAM163AQ96GL9 167 aaPredicted RBP12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 CRACR2AQ9BSW2 395 aa12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 NLRC4Q9NPP4 1024 aa12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 ARHGAP20Q9P2F6 1191 aa12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 KRT86O43790 486 aa12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 TRIM37O94972 964 aa12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 TTLL1O95922 423 aa12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 PSMD2Q13200 908 aa12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 VWA3BQ502W6 1294 aa12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 ASPRV1Q53RT3 343 aa12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 ZC3H12CQ9C0D7 883 aaKnown RBP12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 DBNDD1Q9H9R9 158 aa12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 MAGEF1Q9HAY2 307 aa12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 MYO1AQ9UBC5 1043 aa12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 RAB21Q9UL25 225 aa12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 CAPN6Q9Y6Q1 641 aa12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 G3V3G9 751 aa12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 POLRMTO00411 1230 aaKnown RBP12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 PSMD14O00487 310 aa12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 SKAP2O75563 359 aaPredicted RBP12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 CXCR5P32302 372 aa12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 DNA2P51530 1060 aa12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 KRT83P78385 493 aa12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 C2orf54Q08AI8 447 aa12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 DCAF8Q5TAQ9 597 aa12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 CDC42EP5Q6NZY7 148 aa12.94□□□□□ -0.34
RAPGEF3-201ENST00000389212 TMC4Q7Z404 712 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms