RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 OGFOD1Q8N543 542 aa9.92□□□□□ -0.82
GPNMB-202ENST00000381990 NELFBQ8WX92 580 aa9.92□□□□□ -0.82
GPNMB-202ENST00000381990 CHP1Q99653 195 aa9.92□□□□□ -0.82
GPNMB-202ENST00000381990 NUP58Q9BVL2 599 aa9.92□□□□□ -0.82
GPNMB-202ENST00000381990 ZNRF3Q9ULT6 936 aa9.92□□□□□ -0.82
GPNMB-202ENST00000381990 PNMA6FA0A0J9YX94 578 aa9.92□□□□□ -0.82
GPNMB-202ENST00000381990 TTC26A0AVF1 554 aa9.92□□□□□ -0.82
GPNMB-202ENST00000381990 RNF225M0QZC1 329 aaPredicted RBP9.92□□□□□ -0.82
GPNMB-202ENST00000381990 LAD1O00515 517 aa9.92□□□□□ -0.82
GPNMB-202ENST00000381990 OPA1O60313 960 aa9.92□□□□□ -0.82
GPNMB-202ENST00000381990 EEF2P13639 858 aaKnown RBP9.92□□□□□ -0.82
GPNMB-202ENST00000381990 LONP1P36776 959 aaKnown RBP9.92□□□□□ -0.82
GPNMB-202ENST00000381990 NONOQ15233 471 aaKnown RBP eCLIP9.92□□□□□ -0.82
GPNMB-202ENST00000381990 DLGAP5Q15398 846 aa9.92□□□□□ -0.82
GPNMB-202ENST00000381990 CCDC96Q2M329 555 aa9.92□□□□□ -0.82
GPNMB-202ENST00000381990 MCTP2Q6DN12 878 aa9.92□□□□□ -0.82
GPNMB-202ENST00000381990 PPP1R18Q6NYC8 613 aa9.92□□□□□ -0.82
GPNMB-202ENST00000381990 ZNF572Q7Z3I7 529 aaPredicted RBP9.92□□□□□ -0.82
GPNMB-202ENST00000381990 SPATS2Q86XZ4 545 aaKnown RBP9.92□□□□□ -0.82
GPNMB-202ENST00000381990 IQCDQ96DY2 449 aa9.92□□□□□ -0.82
GPNMB-202ENST00000381990 MYCBPQ99417 103 aaPredicted RBP9.92□□□□□ -0.82
GPNMB-202ENST00000381990 JMJD4Q9H9V9 463 aa9.92□□□□□ -0.82
GPNMB-202ENST00000381990 ZNHIT6Q9NWK9 470 aaKnown RBP9.92□□□□□ -0.82
GPNMB-202ENST00000381990 TAB2Q9NYJ8 693 aa9.92□□□□□ -0.82
GPNMB-202ENST00000381990 AGPSO00116 658 aa9.91□□□□□ -0.82
GPNMB-202ENST00000381990 ZBTB7AO95365 584 aa9.91□□□□□ -0.82
GPNMB-202ENST00000381990 MYL1P05976 194 aa9.91□□□□□ -0.82
GPNMB-202ENST00000381990 EPB41P11171 864 aaKnown RBP9.91□□□□□ -0.82
GPNMB-202ENST00000381990 POLD1P28340 1107 aa9.91□□□□□ -0.82
GPNMB-202ENST00000381990 IRAK1P51617 712 aa9.91□□□□□ -0.82
GPNMB-202ENST00000381990 IL17AQ16552 155 aa9.91□□□□□ -0.82
GPNMB-202ENST00000381990 ABCB5Q2M3G0 1257 aa9.91□□□□□ -0.82
GPNMB-202ENST00000381990 PDXDC2PQ6P474 469 aa9.91□□□□□ -0.82
GPNMB-202ENST00000381990 KIAA1328Q86T90 577 aa9.91□□□□□ -0.82
GPNMB-202ENST00000381990 ADGRF4Q8IZF3 695 aa9.91□□□□□ -0.82
GPNMB-202ENST00000381990 REXO1Q8N1G1 1221 aaKnown RBP9.91□□□□□ -0.82
GPNMB-202ENST00000381990 MB21D1Q8N884 522 aa9.91□□□□□ -0.82
GPNMB-202ENST00000381990 AGBL3Q8NEM8 1001 aa9.91□□□□□ -0.82
GPNMB-202ENST00000381990 CAGE1Q8TC20 777 aa9.91□□□□□ -0.82
GPNMB-202ENST00000381990 AENQ8WTP8 325 aaKnown RBP9.91□□□□□ -0.82
GPNMB-202ENST00000381990 DCAF4Q8WV16 495 aa9.91□□□□□ -0.82
GPNMB-202ENST00000381990 CSRNP1Q96S65 589 aa9.91□□□□□ -0.82
GPNMB-202ENST00000381990 CAPS2Q9BXY5 557 aa9.91□□□□□ -0.82
GPNMB-202ENST00000381990 ENC1O14682 589 aa9.91□□□□□ -0.82
GPNMB-202ENST00000381990 EIF3HO15372 352 aaKnown RBP eCLIP9.91□□□□□ -0.82
GPNMB-202ENST00000381990 CLSTN1O94985 981 aa9.91□□□□□ -0.82
GPNMB-202ENST00000381990 PRLRP16471 622 aa9.91□□□□□ -0.82
GPNMB-202ENST00000381990 CDC25AP30304 524 aa9.91□□□□□ -0.82
GPNMB-202ENST00000381990 DNM2P50570 870 aa9.91□□□□□ -0.82
GPNMB-202ENST00000381990 HERVK_113P62684 666 aa9.91□□□□□ -0.82
GPNMB-202ENST00000381990 ICA1Q05084 483 aa9.91□□□□□ -0.82
GPNMB-202ENST00000381990 SEPT2Q15019 361 aa9.91□□□□□ -0.82
GPNMB-202ENST00000381990 CCDC91Q7Z6B0 441 aa9.91□□□□□ -0.82
GPNMB-202ENST00000381990 MICALL1Q8N3F8 863 aa9.91□□□□□ -0.82
GPNMB-202ENST00000381990 MMGT1Q8N4V1 131 aa9.91□□□□□ -0.82
GPNMB-202ENST00000381990 NOC3LQ8WTT2 800 aaKnown RBP9.91□□□□□ -0.82
GPNMB-202ENST00000381990 MTMR8Q96EF0 704 aa9.91□□□□□ -0.82
GPNMB-202ENST00000381990 PURBQ96QR8 312 aaKnown RBP9.91□□□□□ -0.82
GPNMB-202ENST00000381990 SH3GL2Q99962 352 aa9.91□□□□□ -0.82
GPNMB-202ENST00000381990 THAP9Q9H5L6 903 aa9.91□□□□□ -0.82
GPNMB-202ENST00000381990 HDAC6Q9UBN7 1215 aa9.91□□□□□ -0.82
GPNMB-202ENST00000381990 ZNF70Q9UC06 446 aaPredicted RBP9.91□□□□□ -0.82
GPNMB-202ENST00000381990 HERC5Q9UII4 1024 aaKnown RBP9.91□□□□□ -0.82
GPNMB-202ENST00000381990 CASP1P29466 404 aa9.9□□□□□ -0.82
GPNMB-202ENST00000381990 PRPHP41219 470 aa9.9□□□□□ -0.82
GPNMB-202ENST00000381990 ADCY7P51828 1080 aa9.9□□□□□ -0.82
GPNMB-202ENST00000381990 CDK17Q00537 523 aa9.9□□□□□ -0.82
GPNMB-202ENST00000381990 ORC2Q13416 577 aaPredicted RBP9.9□□□□□ -0.82
GPNMB-202ENST00000381990 DALRD3Q5D0E6 543 aaKnown RBP9.9□□□□□ -0.82
GPNMB-202ENST00000381990 FKBP1CQ5VVH2 108 aa9.9□□□□□ -0.82
GPNMB-202ENST00000381990 ALS2CLQ60I27 953 aa9.9□□□□□ -0.82
GPNMB-202ENST00000381990 TTBK2Q6IQ55 1244 aa9.9□□□□□ -0.82
GPNMB-202ENST00000381990 DTHD1Q6ZMT9 781 aa9.9□□□□□ -0.82
GPNMB-202ENST00000381990 KCTD1Q719H9 257 aa9.9□□□□□ -0.82
GPNMB-202ENST00000381990 MTFR1LQ9H019 292 aa9.9□□□□□ -0.82
GPNMB-202ENST00000381990 RPN1P04843 607 aaKnown RBP9.9□□□□□ -0.83
GPNMB-202ENST00000381990 SHROOM1Q2M3G4 852 aaPredicted RBP9.9□□□□□ -0.83
GPNMB-202ENST00000381990 SPDYE2Q495Y8 402 aa9.9□□□□□ -0.83
GPNMB-202ENST00000381990 RBM26Q5T8P6 1007 aaKnown RBP9.9□□□□□ -0.83
GPNMB-202ENST00000381990 SLFN13Q68D06 897 aa9.9□□□□□ -0.83
GPNMB-202ENST00000381990 EMBQ6PCB8 327 aa9.9□□□□□ -0.83
GPNMB-202ENST00000381990 WDR59Q6PJI9 974 aa9.9□□□□□ -0.83
GPNMB-202ENST00000381990 B4GALNT4Q76KP1 1039 aa9.9□□□□□ -0.83
GPNMB-202ENST00000381990 NEK8Q86SG6 692 aa9.9□□□□□ -0.83
GPNMB-202ENST00000381990 SIAH1Q8IUQ4 282 aa9.9□□□□□ -0.83
GPNMB-202ENST00000381990 MTMR14Q8NCE2 650 aa9.9□□□□□ -0.83
GPNMB-202ENST00000381990 TRIM58Q8NG06 486 aa9.9□□□□□ -0.83
GPNMB-202ENST00000381990 ZNF507Q8TCN5 953 aa9.9□□□□□ -0.83
GPNMB-202ENST00000381990 FAM151AQ8WW52 585 aa9.9□□□□□ -0.83
GPNMB-202ENST00000381990 COA7Q96BR5 231 aa9.9□□□□□ -0.83
GPNMB-202ENST00000381990 TMEM60Q9H2L4 133 aa9.9□□□□□ -0.83
GPNMB-202ENST00000381990 TRIM10Q9UDY6 481 aa9.9□□□□□ -0.83
GPNMB-202ENST00000381990 ZBTB12Q9Y330 459 aaPredicted RBP9.9□□□□□ -0.83
GPNMB-202ENST00000381990 FAM169AQ9Y6X4 670 aa9.9□□□□□ -0.83
GPNMB-202ENST00000381990 CLRN2A0PK11 232 aa9.89□□□□□ -0.83
GPNMB-202ENST00000381990 TCP10L2B9ZVM9 353 aa9.89□□□□□ -0.83
GPNMB-202ENST00000381990 ZBTB5O15062 677 aa9.89□□□□□ -0.83
GPNMB-202ENST00000381990 GDF11O95390 407 aa9.89□□□□□ -0.83
GPNMB-202ENST00000381990 IDEP14735 1019 aa9.89□□□□□ -0.83
GPNMB-202ENST00000381990 SLC16A2P36021 539 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms