RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 MRPS9P82933 396 aaKnown RBP13.29□□□□□ -0.28
APOBEC3F-202ENST00000381565 SMAD3P84022 425 aaKnown RBP13.29□□□□□ -0.28
APOBEC3F-202ENST00000381565 TLE2Q04725 743 aa13.29□□□□□ -0.28
APOBEC3F-202ENST00000381565 ARHGAP1Q07960 439 aa13.29□□□□□ -0.28
APOBEC3F-202ENST00000381565 TTLL4Q14679 1199 aa13.29□□□□□ -0.28
APOBEC3F-202ENST00000381565 UBE2SQ16763 222 aa13.29□□□□□ -0.28
APOBEC3F-202ENST00000381565 LY6KQ17RY6 165 aa13.29□□□□□ -0.28
APOBEC3F-202ENST00000381565 CXCL17Q6UXB2 119 aa13.29□□□□□ -0.28
APOBEC3F-202ENST00000381565 SEPT14Q6ZU15 432 aa13.29□□□□□ -0.28
APOBEC3F-202ENST00000381565 VSIG10LQ86VR7 867 aa13.29□□□□□ -0.28
APOBEC3F-202ENST00000381565 OR6J1Q8NGC5 347 aa13.29□□□□□ -0.28
APOBEC3F-202ENST00000381565 NCOA5Q9HCD5 579 aaKnown RBP13.29□□□□□ -0.28
APOBEC3F-202ENST00000381565 PCDHB8Q9UN66 801 aa13.29□□□□□ -0.28
APOBEC3F-202ENST00000381565 PCDHB13Q9Y5F0 798 aa13.29□□□□□ -0.28
APOBEC3F-202ENST00000381565 V9GY48 417 aaPredicted RBP13.29□□□□□ -0.28
APOBEC3F-202ENST00000381565 GRIN2DO15399 1336 aa13.29□□□□□ -0.28
APOBEC3F-202ENST00000381565 NKRFO15226 690 aaKnown RBP eCLIP13.28□□□□□ -0.28
APOBEC3F-202ENST00000381565 CCND2P30279 289 aa13.28□□□□□ -0.28
APOBEC3F-202ENST00000381565 CDK7P50613 346 aa13.28□□□□□ -0.28
APOBEC3F-202ENST00000381565 PKN1Q16512 942 aa13.28□□□□□ -0.28
APOBEC3F-202ENST00000381565 PPP1R18Q6NYC8 613 aa13.28□□□□□ -0.28
APOBEC3F-202ENST00000381565 ANKRD33Q7Z3H0 272 aa13.28□□□□□ -0.28
APOBEC3F-202ENST00000381565 SMARCC2Q8TAQ2 1214 aa13.28□□□□□ -0.28
APOBEC3F-202ENST00000381565 PHKBQ93100 1093 aa13.28□□□□□ -0.28
APOBEC3F-202ENST00000381565 GLT1D1Q96MS3 346 aa13.28□□□□□ -0.28
APOBEC3F-202ENST00000381565 LARP6Q9BRS8 491 aaKnown RBP13.28□□□□□ -0.28
APOBEC3F-202ENST00000381565 BARHL2Q9NY43 387 aa13.28□□□□□ -0.28
APOBEC3F-202ENST00000381565 DDX41Q9UJV9 622 aaKnown RBP13.28□□□□□ -0.28
APOBEC3F-202ENST00000381565 ELP1O95163 1332 aa13.28□□□□□ -0.28
APOBEC3F-202ENST00000381565 KAT6AQ92794 2004 aa13.28□□□□□ -0.28
APOBEC3F-202ENST00000381565 GBF1Q92538 1859 aa13.27□□□□□ -0.28
APOBEC3F-202ENST00000381565 A0A0U1RQG5 324 aaPredicted RBP13.27□□□□□ -0.29
APOBEC3F-202ENST00000381565 A6NJR5 290 aa13.27□□□□□ -0.29
APOBEC3F-202ENST00000381565 hCG_1984214I3L0E3 225 aa13.27□□□□□ -0.29
APOBEC3F-202ENST00000381565 ADAMTS3O15072 1205 aa13.27□□□□□ -0.29
APOBEC3F-202ENST00000381565 PQBP1O60828 265 aaKnown RBP13.27□□□□□ -0.29
APOBEC3F-202ENST00000381565 PPFIA3O75145 1194 aa13.27□□□□□ -0.29
APOBEC3F-202ENST00000381565 NAPAP54920 295 aa13.27□□□□□ -0.29
APOBEC3F-202ENST00000381565 PSMC6P62333 389 aa13.27□□□□□ -0.29
APOBEC3F-202ENST00000381565 CCT2P78371 535 aaKnown RBP13.27□□□□□ -0.29
APOBEC3F-202ENST00000381565 PURAQ00577 322 aaKnown RBP13.27□□□□□ -0.29
APOBEC3F-202ENST00000381565 SEMA3FQ13275 785 aa13.27□□□□□ -0.29
APOBEC3F-202ENST00000381565 PFKFB3Q16875 520 aaPredicted RBP13.27□□□□□ -0.29
APOBEC3F-202ENST00000381565 ZNF713Q8N859 430 aaPredicted RBP13.27□□□□□ -0.29
APOBEC3F-202ENST00000381565 SLC43A3Q8NBI5 491 aa13.27□□□□□ -0.29
APOBEC3F-202ENST00000381565 PSTPIP2Q9H939 334 aa13.27□□□□□ -0.29
APOBEC3F-202ENST00000381565 PDRG1Q9NUG6 133 aa13.27□□□□□ -0.29
APOBEC3F-202ENST00000381565 CCDC196A0A1B0GTZ2 297 aa13.26□□□□□ -0.29
APOBEC3F-202ENST00000381565 PRPF3O43395 683 aaKnown RBP13.26□□□□□ -0.29
APOBEC3F-202ENST00000381565 GH1P01241 217 aa13.26□□□□□ -0.29
APOBEC3F-202ENST00000381565 MMP3P08254 477 aa13.26□□□□□ -0.29
APOBEC3F-202ENST00000381565 SCG2P13521 617 aa13.26□□□□□ -0.29
APOBEC3F-202ENST00000381565 SIP14410 1827 aa13.26□□□□□ -0.29
APOBEC3F-202ENST00000381565 IFNAR1P17181 557 aa13.26□□□□□ -0.29
APOBEC3F-202ENST00000381565 UBA1P22314 1058 aaKnown RBP13.26□□□□□ -0.29
APOBEC3F-202ENST00000381565 CLK2P49760 499 aaKnown RBP13.26□□□□□ -0.29
APOBEC3F-202ENST00000381565 CPT1AP50416 773 aa13.26□□□□□ -0.29
APOBEC3F-202ENST00000381565 SP2Q02086 613 aa13.26□□□□□ -0.29
APOBEC3F-202ENST00000381565 FAAP100Q0VG06 881 aa13.26□□□□□ -0.29
APOBEC3F-202ENST00000381565 PCNX4Q63HM2 1172 aa13.26□□□□□ -0.29
APOBEC3F-202ENST00000381565 FAM126BQ8IXS8 530 aa13.26□□□□□ -0.29
APOBEC3F-202ENST00000381565 CUL5Q93034 780 aa13.26□□□□□ -0.29
APOBEC3F-202ENST00000381565 EMID1Q96A84 441 aaPredicted RBP13.26□□□□□ -0.29
APOBEC3F-202ENST00000381565 ZNF274Q96GC6 653 aaPredicted RBP13.26□□□□□ -0.29
APOBEC3F-202ENST00000381565 TOX2Q96NM4 488 aa13.26□□□□□ -0.29
APOBEC3F-202ENST00000381565 INPP4AQ96PE3 977 aaPredicted RBP13.26□□□□□ -0.29
APOBEC3F-202ENST00000381565 BCAS3Q9H6U6 928 aa13.26□□□□□ -0.29
APOBEC3F-202ENST00000381565 RIC8AQ9NPQ8 531 aa13.26□□□□□ -0.29
APOBEC3F-202ENST00000381565 MRVI1Q9Y6F6 885 aa13.26□□□□□ -0.29
APOBEC3F-202ENST00000381565 MYH9P35579 1960 aaKnown RBP13.25□□□□□ -0.29
APOBEC3F-202ENST00000381565 ARVCFO00192 962 aa13.25□□□□□ -0.29
APOBEC3F-202ENST00000381565 KIAA0355O15063 1070 aa13.25□□□□□ -0.29
APOBEC3F-202ENST00000381565 CABYRO75952 493 aa13.25□□□□□ -0.29
APOBEC3F-202ENST00000381565 CLTBP09497 229 aa13.25□□□□□ -0.29
APOBEC3F-202ENST00000381565 HS6ST3Q8IZP7 471 aa13.25□□□□□ -0.29
APOBEC3F-202ENST00000381565 USP38Q8NB14 1042 aa13.25□□□□□ -0.29
APOBEC3F-202ENST00000381565 AFG1LQ8WV93 481 aa13.25□□□□□ -0.29
APOBEC3F-202ENST00000381565 MS4A3Q96HJ5 214 aa13.25□□□□□ -0.29
APOBEC3F-202ENST00000381565 PGBD1Q96JS3 809 aa13.25□□□□□ -0.29
APOBEC3F-202ENST00000381565 RNF26Q9BY78 433 aaPredicted RBP13.25□□□□□ -0.29
APOBEC3F-202ENST00000381565 ALDH8A1Q9H2A2 487 aaPredicted RBP13.25□□□□□ -0.29
APOBEC3F-202ENST00000381565 POLR3EQ9NVU0 708 aa13.25□□□□□ -0.29
APOBEC3F-202ENST00000381565 TBX21Q9UL17 535 aa13.25□□□□□ -0.29
APOBEC3F-202ENST00000381565 PTPRSQ13332 1948 aa13.25□□□□□ -0.29
APOBEC3F-202ENST00000381565 TET1Q8NFU7 2136 aa13.24□□□□□ -0.29
APOBEC3F-202ENST00000381565 MROH7Q68CQ1 1323 aa13.24□□□□□ -0.29
APOBEC3F-202ENST00000381565 ESYT2A0FGR8 921 aa13.24□□□□□ -0.29
APOBEC3F-202ENST00000381565 ZEB2O60315 1214 aa13.24□□□□□ -0.29
APOBEC3F-202ENST00000381565 SORBS3O60504 671 aa13.24□□□□□ -0.29
APOBEC3F-202ENST00000381565 STAM2O75886 525 aa13.24□□□□□ -0.29
APOBEC3F-202ENST00000381565 LARGE1O95461 756 aa13.24□□□□□ -0.29
APOBEC3F-202ENST00000381565 CD4P01730 458 aa13.24□□□□□ -0.29
APOBEC3F-202ENST00000381565 MYL3P08590 195 aa13.24□□□□□ -0.29
APOBEC3F-202ENST00000381565 HOXD8P13378 290 aaPredicted RBP13.24□□□□□ -0.29
APOBEC3F-202ENST00000381565 FOSL2P15408 326 aa13.24□□□□□ -0.29
APOBEC3F-202ENST00000381565 ICAM3P32942 547 aa13.24□□□□□ -0.29
APOBEC3F-202ENST00000381565 ADCY7P51828 1080 aa13.24□□□□□ -0.29
APOBEC3F-202ENST00000381565 AK2P54819 239 aa13.24□□□□□ -0.29
APOBEC3F-202ENST00000381565 STK3Q13188 491 aa13.24□□□□□ -0.29
APOBEC3F-202ENST00000381565 ITGA7Q13683 1181 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms