RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 A0A1W2PQ45 241 aaPredicted RBP22.12■■□□□ 1.13
GTF3A-201ENST00000381140 A0A1W2PQY0 241 aa22.12■■□□□ 1.13
GTF3A-201ENST00000381140 FIBPO43427 364 aa22.12■■□□□ 1.13
GTF3A-201ENST00000381140 ZEB2O60315 1214 aa22.12■■□□□ 1.13
GTF3A-201ENST00000381140 MYL3P08590 195 aa22.12■■□□□ 1.13
GTF3A-201ENST00000381140 UBA1P22314 1058 aaKnown RBP22.12■■□□□ 1.13
GTF3A-201ENST00000381140 SREBF1P36956 1147 aa22.12■■□□□ 1.13
GTF3A-201ENST00000381140 CPT1AP50416 773 aa22.12■■□□□ 1.13
GTF3A-201ENST00000381140 ARHGAP4P98171 946 aa22.12■■□□□ 1.13
GTF3A-201ENST00000381140 ARHGAP1Q07960 439 aa22.12■■□□□ 1.13
GTF3A-201ENST00000381140 CCSAPQ6IQ19 270 aaPredicted RBP22.12■■□□□ 1.13
GTF3A-201ENST00000381140 CXCL17Q6UXB2 119 aa22.12■■□□□ 1.13
GTF3A-201ENST00000381140 TMX3Q96JJ7 454 aa22.12■■□□□ 1.13
GTF3A-201ENST00000381140 MOXD2PA6NHM9 499 aa22.12■■□□□ 1.13
GTF3A-201ENST00000381140 GGPS1O95749 300 aa22.12■■□□□ 1.13
GTF3A-201ENST00000381140 ITGB5P18084 799 aa22.12■■□□□ 1.13
GTF3A-201ENST00000381140 MCM2P49736 904 aa22.12■■□□□ 1.13
GTF3A-201ENST00000381140 SP2Q02086 613 aa22.12■■□□□ 1.13
GTF3A-201ENST00000381140 SEMA3FQ13275 785 aa22.12■■□□□ 1.13
GTF3A-201ENST00000381140 TRIM29Q14134 588 aa22.12■■□□□ 1.13
GTF3A-201ENST00000381140 LRRC26Q2I0M4 334 aa22.12■■□□□ 1.13
GTF3A-201ENST00000381140 BRDTQ58F21 947 aaPredicted RBP22.12■■□□□ 1.13
GTF3A-201ENST00000381140 AFG1LQ8WV93 481 aa22.12■■□□□ 1.13
GTF3A-201ENST00000381140 SNX21Q969T3 373 aa22.12■■□□□ 1.13
GTF3A-201ENST00000381140 LLPHQ9BRT6 129 aaKnown RBP22.12■■□□□ 1.13
GTF3A-201ENST00000381140 PHF20Q9BVI0 1012 aa22.12■■□□□ 1.13
GTF3A-201ENST00000381140 STARD7Q9NQZ5 370 aa22.12■■□□□ 1.13
GTF3A-201ENST00000381140 UBIAD1Q9Y5Z9 338 aa22.12■■□□□ 1.13
GTF3A-201ENST00000381140 SPATA31C2B4DYI2 1134 aa22.11■■□□□ 1.13
GTF3A-201ENST00000381140 NKX3-2P78367 333 aa22.11■■□□□ 1.13
GTF3A-201ENST00000381140 MTMR1Q13613 665 aa22.11■■□□□ 1.13
GTF3A-201ENST00000381140 GALNT17Q6IS24 598 aa22.11■■□□□ 1.13
GTF3A-201ENST00000381140 GLT1D1Q96MS3 346 aa22.11■■□□□ 1.13
GTF3A-201ENST00000381140 MLXIPQ9HAP2 919 aa22.11■■□□□ 1.13
GTF3A-201ENST00000381140 EVI5O60447 810 aa22.1■■□□□ 1.13
GTF3A-201ENST00000381140 TGFB3P10600 412 aa22.1■■□□□ 1.13
GTF3A-201ENST00000381140 ICAM3P32942 547 aa22.1■■□□□ 1.13
GTF3A-201ENST00000381140 LAMC2Q13753 1193 aa22.1■■□□□ 1.13
GTF3A-201ENST00000381140 BECN1Q14457 450 aa22.1■■□□□ 1.13
GTF3A-201ENST00000381140 NPY5RQ15761 445 aa22.1■■□□□ 1.13
GTF3A-201ENST00000381140 CELF3Q5SZQ8 465 aaKnown RBP22.1■■□□□ 1.13
GTF3A-201ENST00000381140 SLC39A5Q6ZMH5 540 aa22.1■■□□□ 1.13
GTF3A-201ENST00000381140 C7orf61Q8IZ16 206 aa22.1■■□□□ 1.13
GTF3A-201ENST00000381140 FAM177A1Q8N128 213 aaPredicted RBP22.1■■□□□ 1.13
GTF3A-201ENST00000381140 FAM184AQ8NB25 1140 aa22.1■■□□□ 1.13
GTF3A-201ENST00000381140 DAGLBQ8NCG7 672 aa22.1■■□□□ 1.13
GTF3A-201ENST00000381140 CYP2W1Q8TAV3 490 aa22.1■■□□□ 1.13
GTF3A-201ENST00000381140 GPRASP2Q96D09 838 aa22.1■■□□□ 1.13
GTF3A-201ENST00000381140 SPATA33Q96N06 139 aa22.1■■□□□ 1.13
GTF3A-201ENST00000381140 MXRA8Q9BRK3 442 aa22.1■■□□□ 1.13
GTF3A-201ENST00000381140 BCAS3Q9H6U6 928 aa22.1■■□□□ 1.13
GTF3A-201ENST00000381140 JADE2Q9NQC1 790 aa22.1■■□□□ 1.13
GTF3A-201ENST00000381140 ATP11BQ9Y2G3 1177 aa22.1■■□□□ 1.13
GTF3A-201ENST00000381140 CHMP4BP1P59074 171 aa22.09■■□□□ 1.13
GTF3A-201ENST00000381140 GUCY1B3Q02153 619 aa22.09■■□□□ 1.13
GTF3A-201ENST00000381140 SP4Q02446 784 aa22.09■■□□□ 1.13
GTF3A-201ENST00000381140 OXER1Q8TDS5 423 aa22.09■■□□□ 1.13
GTF3A-201ENST00000381140 UIMC1Q96RL1 719 aa22.09■■□□□ 1.13
GTF3A-201ENST00000381140 MMP3P08254 477 aa22.08■■□□□ 1.12
GTF3A-201ENST00000381140 RTP1P59025 263 aa22.08■■□□□ 1.12
GTF3A-201ENST00000381140 PSMC6P62333 389 aa22.08■■□□□ 1.12
GTF3A-201ENST00000381140 HMGN5P82970 282 aaKnown RBP22.08■■□□□ 1.12
GTF3A-201ENST00000381140 NEDD9Q14511 834 aa22.08■■□□□ 1.12
GTF3A-201ENST00000381140 CEP55Q53EZ4 464 aa22.08■■□□□ 1.12
GTF3A-201ENST00000381140 MYSM1Q5VVJ2 828 aa22.08■■□□□ 1.12
GTF3A-201ENST00000381140 CYFIP1Q7L576 1253 aa22.08■■□□□ 1.12
GTF3A-201ENST00000381140 CDHR1Q96JP9 859 aa22.08■■□□□ 1.12
GTF3A-201ENST00000381140 BRMS1Q9HCU9 246 aa22.08■■□□□ 1.12
GTF3A-201ENST00000381140 POLR3EQ9NVU0 708 aa22.08■■□□□ 1.12
GTF3A-201ENST00000381140 DNAH12Q6ZR08 3092 aa22.07■■□□□ 1.12
GTF3A-201ENST00000381140 CCDC194A0A1B0GVG4 234 aa22.07■■□□□ 1.12
GTF3A-201ENST00000381140 A6NJR5 290 aa22.07■■□□□ 1.12
GTF3A-201ENST00000381140 KRT2P35908 639 aa22.07■■□□□ 1.12
GTF3A-201ENST00000381140 TRIM60Q495X7 471 aa22.07■■□□□ 1.12
GTF3A-201ENST00000381140 KRT40Q6A162 431 aa22.07■■□□□ 1.12
GTF3A-201ENST00000381140 KRT25Q7Z3Z0 450 aa22.07■■□□□ 1.12
GTF3A-201ENST00000381140 PLA2G4DQ86XP0 818 aa22.07■■□□□ 1.12
GTF3A-201ENST00000381140 TBCKQ8TEA7 893 aa22.07■■□□□ 1.12
GTF3A-201ENST00000381140 C8orf76Q96K31 380 aa22.07■■□□□ 1.12
GTF3A-201ENST00000381140 M0R2N6 131 aa22.06■■□□□ 1.12
GTF3A-201ENST00000381140 NOP56O00567 594 aaKnown RBP22.06■■□□□ 1.12
GTF3A-201ENST00000381140 ATP9AO75110 1047 aa22.06■■□□□ 1.12
GTF3A-201ENST00000381140 ARP10275 920 aa22.06■■□□□ 1.12
GTF3A-201ENST00000381140 PURAQ00577 322 aaKnown RBP22.06■■□□□ 1.12
GTF3A-201ENST00000381140 NONOQ15233 471 aaKnown RBP eCLIP22.06■■□□□ 1.12
GTF3A-201ENST00000381140 HSDL1Q3SXM5 330 aa22.06■■□□□ 1.12
GTF3A-201ENST00000381140 MTG1Q9BT17 334 aaPredicted RBP22.06■■□□□ 1.12
GTF3A-201ENST00000381140 KCNH7Q9NS40 1196 aa22.06■■□□□ 1.12
GTF3A-201ENST00000381140 SCN10AQ9Y5Y9 1956 aa22.06■■□□□ 1.12
GTF3A-201ENST00000381140 FAM86B1E9PN63 330 aa22.05■■□□□ 1.12
GTF3A-201ENST00000381140 CABYRO75952 493 aa22.05■■□□□ 1.12
GTF3A-201ENST00000381140 CYP3A4P08684 503 aa22.05■■□□□ 1.12
GTF3A-201ENST00000381140 FAM86B2P0C5J1 330 aa22.05■■□□□ 1.12
GTF3A-201ENST00000381140 KCNA2P16389 499 aa22.05■■□□□ 1.12
GTF3A-201ENST00000381140 NR5A1Q13285 461 aa22.05■■□□□ 1.12
GTF3A-201ENST00000381140 DGKDQ16760 1214 aa22.05■■□□□ 1.12
GTF3A-201ENST00000381140 INF2Q27J81 1249 aa22.05■■□□□ 1.12
GTF3A-201ENST00000381140 PRR16Q569H4 304 aa22.05■■□□□ 1.12
GTF3A-201ENST00000381140 PIK3AP1Q6ZUJ8 805 aa22.05■■□□□ 1.12
GTF3A-201ENST00000381140 HSCBQ8IWL3 235 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms