RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 RASA3Q14644 834 aa15.89■□□□□ 0.13
CLCN4-201ENST00000380829 TMEM119Q4V9L6 283 aa15.89■□□□□ 0.13
CLCN4-201ENST00000380829 ICE2Q659A1 982 aa15.89■□□□□ 0.13
CLCN4-201ENST00000380829 IRF2BP1Q8IU81 584 aa15.89■□□□□ 0.13
CLCN4-201ENST00000380829 MNS1Q8NEH6 495 aa15.89■□□□□ 0.13
CLCN4-201ENST00000380829 CPLX3Q8WVH0 158 aa15.89■□□□□ 0.13
CLCN4-201ENST00000380829 CRYGNQ8WXF5 182 aa15.89■□□□□ 0.13
CLCN4-201ENST00000380829 TRIM47Q96LD4 638 aa15.89■□□□□ 0.13
CLCN4-201ENST00000380829 NAP1L4Q99733 375 aaKnown RBP15.89■□□□□ 0.13
CLCN4-201ENST00000380829 CARD6Q9BX69 1037 aa15.89■□□□□ 0.13
CLCN4-201ENST00000380829 KCNMB3Q9NPA1 279 aa15.89■□□□□ 0.13
CLCN4-201ENST00000380829 LIMA1Q9UHB6 759 aaKnown RBP15.89■□□□□ 0.13
CLCN4-201ENST00000380829 PBX1P40424 430 aa15.89■□□□□ 0.13
CLCN4-201ENST00000380829 COPB1P53618 953 aaKnown RBP15.89■□□□□ 0.13
CLCN4-201ENST00000380829 VCPKMTQ9H867 229 aa15.89■□□□□ 0.13
CLCN4-201ENST00000380829 SLC39A2Q9NP94 309 aa15.89■□□□□ 0.13
CLCN4-201ENST00000380829 GEMIN8Q9NWZ8 242 aaKnown RBP15.89■□□□□ 0.13
CLCN4-201ENST00000380829 FER1L6Q2WGJ9 1857 aa15.89■□□□□ 0.13
CLCN4-201ENST00000380829 CYP3A7-CYP3A51PA0A087WV96 503 aa15.88■□□□□ 0.13
CLCN4-201ENST00000380829 H7C1D1 291 aa15.88■□□□□ 0.13
CLCN4-201ENST00000380829 TADA3O75528 432 aa15.88■□□□□ 0.13
CLCN4-201ENST00000380829 CYP3A7P24462 503 aa15.88■□□□□ 0.13
CLCN4-201ENST00000380829 RASSF7Q02833 373 aa15.88■□□□□ 0.13
CLCN4-201ENST00000380829 R3HDM1Q15032 1099 aaKnown RBP15.88■□□□□ 0.13
CLCN4-201ENST00000380829 FCHSD1Q86WN1 690 aa15.88■□□□□ 0.13
CLCN4-201ENST00000380829 KIAA0895Q8NCT3 520 aa15.88■□□□□ 0.13
CLCN4-201ENST00000380829 BAG1Q99933 345 aaPredicted RBP15.88■□□□□ 0.13
CLCN4-201ENST00000380829 SRRTQ9BXP5 876 aaKnown RBP15.88■□□□□ 0.13
CLCN4-201ENST00000380829 FBXO28Q9NVF7 368 aa15.88■□□□□ 0.13
CLCN4-201ENST00000380829 LRRC10BA6NIK2 292 aa15.88■□□□□ 0.13
CLCN4-201ENST00000380829 FAM86B1E9PN63 330 aa15.88■□□□□ 0.13
CLCN4-201ENST00000380829 URI1O94763 535 aaPredicted RBP15.88■□□□□ 0.13
CLCN4-201ENST00000380829 FAM86B2P0C5J1 330 aa15.88■□□□□ 0.13
CLCN4-201ENST00000380829 KCNJ6P48051 423 aa15.88■□□□□ 0.13
CLCN4-201ENST00000380829 SPAG1Q07617 926 aa15.88■□□□□ 0.13
CLCN4-201ENST00000380829 RBL2Q08999 1139 aa15.88■□□□□ 0.13
CLCN4-201ENST00000380829 TNIP1Q15025 636 aa15.88■□□□□ 0.13
CLCN4-201ENST00000380829 TTI2Q6NXR4 508 aa15.88■□□□□ 0.13
CLCN4-201ENST00000380829 CC2D1AQ6P1N0 951 aaPredicted RBP15.88■□□□□ 0.13
CLCN4-201ENST00000380829 TBC1D5Q92609 795 aa15.88■□□□□ 0.13
CLCN4-201ENST00000380829 ASTN2O75129 1339 aaPredicted RBP15.88■□□□□ 0.13
CLCN4-201ENST00000380829 PSDA5PKW4 1024 aaPredicted RBP15.87■□□□□ 0.13
CLCN4-201ENST00000380829 CFBP00751 764 aa15.87■□□□□ 0.13
CLCN4-201ENST00000380829 IDEP14735 1019 aa15.87■□□□□ 0.13
CLCN4-201ENST00000380829 MMP14P50281 582 aa15.87■□□□□ 0.13
CLCN4-201ENST00000380829 SAMD7Q7Z3H4 446 aa15.87■□□□□ 0.13
CLCN4-201ENST00000380829 ANKRD20A12PQ8NF67 263 aa15.87■□□□□ 0.13
CLCN4-201ENST00000380829 DDX12PQ92771 950 aa15.87■□□□□ 0.13
CLCN4-201ENST00000380829 DHTKD1Q96HY7 919 aaPredicted RBP15.87■□□□□ 0.13
CLCN4-201ENST00000380829 MBOAT7Q96N66 472 aa15.87■□□□□ 0.13
CLCN4-201ENST00000380829 CWC15Q9P013 229 aaKnown RBP15.87■□□□□ 0.13
CLCN4-201ENST00000380829 BRCA1P38398 1863 aaKnown RBP15.87■□□□□ 0.13
CLCN4-201ENST00000380829 POTEB3A0JP26 581 aa15.87■□□□□ 0.13
CLCN4-201ENST00000380829 POTECB2RU33 542 aa15.87■□□□□ 0.13
CLCN4-201ENST00000380829 AKR1B15C9JRZ8 316 aaPredicted RBP15.87■□□□□ 0.13
CLCN4-201ENST00000380829 SSBP05455 408 aaKnown RBP eCLIP15.87■□□□□ 0.13
CLCN4-201ENST00000380829 SREBF1P36956 1147 aa15.87■□□□□ 0.13
CLCN4-201ENST00000380829 SEMA3FQ13275 785 aa15.87■□□□□ 0.13
CLCN4-201ENST00000380829 CNNM4Q6P4Q7 775 aa15.87■□□□□ 0.13
CLCN4-201ENST00000380829 POTEBQ6S5H4 581 aa15.87■□□□□ 0.13
CLCN4-201ENST00000380829 PACS2Q86VP3 889 aa15.87■□□□□ 0.13
CLCN4-201ENST00000380829 PPFIBP1Q86W92 1011 aa15.87■□□□□ 0.13
CLCN4-201ENST00000380829 CYP2W1Q8TAV3 490 aa15.87■□□□□ 0.13
CLCN4-201ENST00000380829 GOLGA5Q8TBA6 731 aa15.87■□□□□ 0.13
CLCN4-201ENST00000380829 ETNPPLQ8TBG4 499 aa15.87■□□□□ 0.13
CLCN4-201ENST00000380829 P2RX5Q93086 422 aa15.87■□□□□ 0.13
CLCN4-201ENST00000380829 LENG9Q96B70 501 aa15.87■□□□□ 0.13
CLCN4-201ENST00000380829 DUSP9Q99956 384 aaKnown RBP15.87■□□□□ 0.13
CLCN4-201ENST00000380829 GJA3Q9Y6H8 435 aa15.87■□□□□ 0.13
CLCN4-201ENST00000380829 E9PMD0 336 aa15.86■□□□□ 0.13
CLCN4-201ENST00000380829 FOSP01100 380 aaPredicted RBP15.86■□□□□ 0.13
CLCN4-201ENST00000380829 ASNSP08243 561 aa15.86■□□□□ 0.13
CLCN4-201ENST00000380829 ANKRD40Q6AI12 368 aa15.86■□□□□ 0.13
CLCN4-201ENST00000380829 MOXD1Q6UVY6 613 aa15.86■□□□□ 0.13
CLCN4-201ENST00000380829 UNC13DQ70J99 1090 aa15.86■□□□□ 0.13
CLCN4-201ENST00000380829 MICALL2Q8IY33 904 aa15.86■□□□□ 0.13
CLCN4-201ENST00000380829 CSGALNACT2Q8N6G5 542 aa15.86■□□□□ 0.13
CLCN4-201ENST00000380829 ZNF341Q9BYN7 854 aa15.86■□□□□ 0.13
CLCN4-201ENST00000380829 ADAM21Q9UKJ8 722 aa15.86■□□□□ 0.13
CLCN4-201ENST00000380829 KIAA1024Q9UPX6 916 aa15.86■□□□□ 0.13
CLCN4-201ENST00000380829 H3BQF6 201 aa15.86■□□□□ 0.13
CLCN4-201ENST00000380829 ARHGAP6O43182 974 aa15.86■□□□□ 0.13
CLCN4-201ENST00000380829 CCNE1P24864 410 aa15.86■□□□□ 0.13
CLCN4-201ENST00000380829 GMPSP49915 693 aaPredicted RBP15.86■□□□□ 0.13
CLCN4-201ENST00000380829 TBC1D10BQ4KMP7 808 aaPredicted RBP15.86■□□□□ 0.13
CLCN4-201ENST00000380829 FOXR1Q6PIV2 292 aa15.86■□□□□ 0.13
CLCN4-201ENST00000380829 SLFN12Q8IYM2 578 aa15.86■□□□□ 0.13
CLCN4-201ENST00000380829 CHURC1Q8WUH1 139 aa15.86■□□□□ 0.13
CLCN4-201ENST00000380829 UPF1Q92900 1129 aaKnown RBP eCLIP15.86■□□□□ 0.13
CLCN4-201ENST00000380829 PHF20L1A8MW92 1017 aa15.85■□□□□ 0.13
CLCN4-201ENST00000380829 PES1O00541 588 aaKnown RBP15.85■□□□□ 0.13
CLCN4-201ENST00000380829 GYPCP04921 128 aa15.85■□□□□ 0.13
CLCN4-201ENST00000380829 CASP14P31944 242 aa15.85■□□□□ 0.13
CLCN4-201ENST00000380829 PRELPP51888 382 aa15.85■□□□□ 0.13
CLCN4-201ENST00000380829 ZNF280AP59817 542 aaPredicted RBP15.85■□□□□ 0.13
CLCN4-201ENST00000380829 ETF1P62495 437 aaKnown RBP15.85■□□□□ 0.13
CLCN4-201ENST00000380829 UBXN1Q04323 297 aa15.85■□□□□ 0.13
CLCN4-201ENST00000380829 TEPSINQ96N21 525 aa15.85■□□□□ 0.13
CLCN4-201ENST00000380829 RANBP17Q9H2T7 1088 aaKnown RBP15.85■□□□□ 0.13
CLCN4-201ENST00000380829 THAP9Q9H5L6 903 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms