RNA–Protein interactions for RNA: ENST00000380154.9

UBXN8-203, Transcript of UBX domain protein 8, humanhuman

TSL 2

Gene UBXN8, Length 1,624 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN8-203ENST00000380154 EXOC1Q9NV70 894 aa12.12□□□□□ -0.47
UBXN8-203ENST00000380154 CYP39A1Q9NYL5 469 aa12.12□□□□□ -0.47
UBXN8-203ENST00000380154 MAGEC2Q9UBF1 373 aaPredicted RBP12.12□□□□□ -0.47
UBXN8-203ENST00000380154 ITGB1BP2Q9UKP3 347 aa12.12□□□□□ -0.47
UBXN8-203ENST00000380154 USP15Q9Y4E8 981 aaPredicted RBP12.12□□□□□ -0.47
UBXN8-203ENST00000380154 SLIT3O75094 1523 aa12.12□□□□□ -0.47
UBXN8-203ENST00000380154 PHRF1Q9P1Y6 1649 aaKnown RBP12.12□□□□□ -0.47
UBXN8-203ENST00000380154 NRXN3Q9Y4C0 1643 aa12.12□□□□□ -0.47
UBXN8-203ENST00000380154 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.11□□□□□ -0.47
UBXN8-203ENST00000380154 SART1O43290 800 aaKnown RBP12.11□□□□□ -0.47
UBXN8-203ENST00000380154 SNX3O60493 162 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 SUN1O94901 812 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 MOCS3O95396 460 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 KRT16P08779 473 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 NUDT17P0C025 328 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 ZRSR2Q15696 482 aaKnown RBP12.11□□□□□ -0.47
UBXN8-203ENST00000380154 WASHC2DQ5SRD0 308 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 KLHDC7AQ5VTJ3 777 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 ARMC3Q5W041 872 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 TMEM154Q6P9G4 183 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 CADPS2Q86UW7 1296 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 SGMS1Q86VZ5 419 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 IRF2BP1Q8IU81 584 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 KLHDC4Q8TBB5 520 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 ATP8B4Q8TF62 1192 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 SEC14L1Q92503 715 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 PTPRN2Q92932 1015 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 FAM136AQ96C01 138 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 TMEM237Q96Q45 408 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 EYA1Q99502 592 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 EDEM3Q9BZQ6 932 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 RXFP1Q9HBX9 757 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 TXLNGQ9NUQ3 528 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 LARSQ9P2J5 1176 aaKnown RBP12.11□□□□□ -0.47
UBXN8-203ENST00000380154 PLAGL2Q9UPG8 496 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 LAMB4A4D0S4 1761 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 LRP6O75581 1613 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 SSU72P8A0A1W2PR75 194 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 F8VZ95 297 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 CCDC188H7C350 402 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 RBAK-RBAKDNI3L0D1 243 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 ZNF263O14978 683 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 CYP27B1O15528 508 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 TMCC1O94876 653 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 TRIM21P19474 475 aaKnown RBP12.11□□□□□ -0.47
UBXN8-203ENST00000380154 RPL13P26373 211 aaKnown RBP12.11□□□□□ -0.47
UBXN8-203ENST00000380154 CDC25CP30307 473 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 PPP1R2P41236 205 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 RFX5P48382 616 aaPredicted RBP12.11□□□□□ -0.47
UBXN8-203ENST00000380154 RCAN1P53805 252 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 RASA3Q14644 834 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 GSTA3Q16772 222 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 KRT71Q3SY84 523 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 FAM133BQ5BKY9 247 aaKnown RBP12.11□□□□□ -0.47
UBXN8-203ENST00000380154 TSHZ1Q6ZSZ6 1077 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 DDX46Q7L014 1031 aaKnown RBP12.11□□□□□ -0.47
UBXN8-203ENST00000380154 CHST3Q7LGC8 479 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 USP38Q8NB14 1042 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 FBXO41Q8TF61 875 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 TSPAN18Q96SJ8 248 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 NDNQ99608 321 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 TMEM109Q9BVC6 243 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 UBE2OQ9C0C9 1292 aaKnown RBP12.11□□□□□ -0.47
UBXN8-203ENST00000380154 MIS12Q9H081 205 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 MLXIPQ9HAP2 919 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 GPHNQ9NQX3 736 aaPredicted RBP12.11□□□□□ -0.47
UBXN8-203ENST00000380154 HEG1Q9ULI3 1381 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 C1orf167Q5SNV9 1468 aa12.11□□□□□ -0.47
UBXN8-203ENST00000380154 PLEKHG3A1L390 1219 aa12.1□□□□□ -0.47
UBXN8-203ENST00000380154 RAD51CO43502 376 aa12.1□□□□□ -0.47
UBXN8-203ENST00000380154 ECEL1O95672 775 aa12.1□□□□□ -0.47
UBXN8-203ENST00000380154 AGTP01019 485 aa12.1□□□□□ -0.47
UBXN8-203ENST00000380154 IFNAR1P17181 557 aa12.1□□□□□ -0.47
UBXN8-203ENST00000380154 STAT6P42226 847 aa12.1□□□□□ -0.47
UBXN8-203ENST00000380154 KIF11P52732 1056 aa12.1□□□□□ -0.47
UBXN8-203ENST00000380154 ERVK-9P63128 1117 aa12.1□□□□□ -0.47
UBXN8-203ENST00000380154 GRIN1Q05586 938 aa12.1□□□□□ -0.47
UBXN8-203ENST00000380154 SSRP1Q08945 709 aaKnown RBP12.1□□□□□ -0.47
UBXN8-203ENST00000380154 MKRN3Q13064 507 aaKnown RBP12.1□□□□□ -0.47
UBXN8-203ENST00000380154 SPDYAQ5MJ70 313 aa12.1□□□□□ -0.47
UBXN8-203ENST00000380154 APOA5Q6Q788 366 aa12.1□□□□□ -0.47
UBXN8-203ENST00000380154 TMC3Q7Z5M5 1100 aa12.1□□□□□ -0.47
UBXN8-203ENST00000380154 COL23A1Q86Y22 540 aaPredicted RBP12.1□□□□□ -0.47
UBXN8-203ENST00000380154 ZSCAN29Q8IWY8 852 aaPredicted RBP12.1□□□□□ -0.47
UBXN8-203ENST00000380154 DIS3L2Q8IYB7 885 aaKnown RBP12.1□□□□□ -0.47
UBXN8-203ENST00000380154 RNF168Q8IYW5 571 aaPredicted RBP12.1□□□□□ -0.47
UBXN8-203ENST00000380154 LRRC34Q8IZ02 419 aa12.1□□□□□ -0.47
UBXN8-203ENST00000380154 DNAJC9Q8WXX5 260 aa12.1□□□□□ -0.47
UBXN8-203ENST00000380154 IRGQQ8WZA9 623 aa12.1□□□□□ -0.47
UBXN8-203ENST00000380154 HAPLN3Q96S86 360 aa12.1□□□□□ -0.47
UBXN8-203ENST00000380154 KRT12Q99456 494 aa12.1□□□□□ -0.47
UBXN8-203ENST00000380154 SLITRK6Q9H5Y7 841 aa12.1□□□□□ -0.47
UBXN8-203ENST00000380154 PIDD1Q9HB75 910 aa12.1□□□□□ -0.47
UBXN8-203ENST00000380154 ABCF3Q9NUQ8 709 aa12.1□□□□□ -0.47
UBXN8-203ENST00000380154 TFR2Q9UP52 801 aa12.1□□□□□ -0.47
UBXN8-203ENST00000380154 ARL2BPQ9Y2Y0 163 aa12.1□□□□□ -0.47
UBXN8-203ENST00000380154 DUSP10Q9Y6W6 482 aa12.1□□□□□ -0.47
UBXN8-203ENST00000380154 COMMD3-BMI1R4GMX3 469 aa12.1□□□□□ -0.47
UBXN8-203ENST00000380154 ATP8B3O60423 1300 aa12.1□□□□□ -0.47
UBXN8-203ENST00000380154 TPBGLP0DKB5 382 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms