RNA–Protein interactions for RNA: ENST00000378823.7

RAD50-201, Transcript of RAD50 double strand break repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD50, Length 8,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-201ENST00000378823 SPDYE2BA6NHP3 402 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 SPDYE6P0CI01 402 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 ATP6V1E1P36543 226 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 RPS8P62241 208 aaKnown RBP12.13□□□□□ -0.47
RAD50-201ENST00000378823 MYLK4Q86YV6 388 aaPredicted RBP12.13□□□□□ -0.47
RAD50-201ENST00000378823 LGR6Q9HBX8 967 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 PPIP5K2O43314 1243 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 PDE6AP16499 860 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 SLMAPQ14BN4 828 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.13□□□□□ -0.47
RAD50-201ENST00000378823 ZMAT2Q96NC0 199 aaKnown RBP12.13□□□□□ -0.47
RAD50-201ENST00000378823 GAP43P17677 238 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 PRKG1Q13976 671 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 E2F5Q15329 346 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 CACTINQ8WUQ7 758 aaKnown RBP12.13□□□□□ -0.47
RAD50-201ENST00000378823 POLR3EQ9NVU0 708 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 THRAP3Q9Y2W1 955 aaKnown RBP12.13□□□□□ -0.47
RAD50-201ENST00000378823 ATP2B4P23634 1241 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 CYP4A11Q02928 519 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 RBL2Q08999 1139 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.13□□□□□ -0.47
RAD50-201ENST00000378823 FAM133BQ5BKY9 247 aaKnown RBP12.13□□□□□ -0.47
RAD50-201ENST00000378823 ATG16L1Q676U5 607 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 MAML1Q92585 1016 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 UPF3AQ9H1J1 476 aaKnown RBP12.13□□□□□ -0.47
RAD50-201ENST00000378823 SLC38A10Q9HBR0 1119 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 UBN1Q9NPG3 1134 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 ZC4H2Q9NQZ6 224 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 SLC12A6Q9UHW9 1150 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 MAP2P11137 1827 aaKnown RBP12.13□□□□□ -0.47
RAD50-201ENST00000378823 A0A1W2PQ27 194 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 A0A1W2PQ64 194 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 A0A1W2PQD8 194 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 ACTN1P12814 892 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 HSPA6P17066 643 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 TCP11X2Q5H9J9 407 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 N4BP2L2Q92802 583 aaPredicted RBP12.13□□□□□ -0.47
RAD50-201ENST00000378823 FGFR1OP2Q9NVK5 253 aa12.13□□□□□ -0.47
RAD50-201ENST00000378823 XPAP23025 273 aaPredicted RBP12.12□□□□□ -0.47
RAD50-201ENST00000378823 C2orf54Q08AI8 447 aa12.12□□□□□ -0.47
RAD50-201ENST00000378823 GPATCH4Q5T3I0 446 aaKnown RBP12.12□□□□□ -0.47
RAD50-201ENST00000378823 PAGR1Q9BTK6 254 aa12.12□□□□□ -0.47
RAD50-201ENST00000378823 KDM5DQ9BY66 1539 aa12.12□□□□□ -0.47
RAD50-201ENST00000378823 NCF2P19878 526 aaPredicted RBP12.12□□□□□ -0.47
RAD50-201ENST00000378823 PMLP29590 882 aa12.12□□□□□ -0.47
RAD50-201ENST00000378823 CCNYQ8ND76 341 aa12.12□□□□□ -0.47
RAD50-201ENST00000378823 DEPDC1BQ8WUY9 529 aa12.12□□□□□ -0.47
RAD50-201ENST00000378823 EDC3Q96F86 508 aaKnown RBP12.12□□□□□ -0.47
RAD50-201ENST00000378823 TRAIPQ9BWF2 469 aa12.12□□□□□ -0.47
RAD50-201ENST00000378823 SYF2O95926 243 aaKnown RBP12.12□□□□□ -0.47
RAD50-201ENST00000378823 PDIA3P30101 505 aaKnown RBP12.12□□□□□ -0.47
RAD50-201ENST00000378823 MAN2A1Q16706 1144 aa12.12□□□□□ -0.47
RAD50-201ENST00000378823 ASPRV1Q53RT3 343 aa12.12□□□□□ -0.47
RAD50-201ENST00000378823 ANKRD13CQ8N6S4 541 aa12.12□□□□□ -0.47
RAD50-201ENST00000378823 PRPF38AQ8NAV1 312 aaKnown RBP12.12□□□□□ -0.47
RAD50-201ENST00000378823 EXOC4Q96A65 974 aa12.12□□□□□ -0.47
RAD50-201ENST00000378823 TRIM15Q9C019 465 aa12.12□□□□□ -0.47
RAD50-201ENST00000378823 ACTR5Q9H9F9 607 aaPredicted RBP12.12□□□□□ -0.47
RAD50-201ENST00000378823 TOM1L1O75674 476 aa12.12□□□□□ -0.47
RAD50-201ENST00000378823 PABPC4Q13310 644 aaKnown RBP eCLIP12.12□□□□□ -0.47
RAD50-201ENST00000378823 CUL1Q13616 776 aa12.12□□□□□ -0.47
RAD50-201ENST00000378823 C6orf118Q5T5N4 469 aa12.12□□□□□ -0.47
RAD50-201ENST00000378823 ZNF658Q5TYW1 1059 aaPredicted RBP12.12□□□□□ -0.47
RAD50-201ENST00000378823 GSPT1P15170 499 aaKnown RBP12.12□□□□□ -0.47
RAD50-201ENST00000378823 SRRM1Q8IYB3 904 aaKnown RBP12.12□□□□□ -0.47
RAD50-201ENST00000378823 EXOC8Q8IYI6 725 aa12.12□□□□□ -0.47
RAD50-201ENST00000378823 IKBKBO14920 756 aa12.12□□□□□ -0.47
RAD50-201ENST00000378823 TFDP1Q14186 410 aa12.12□□□□□ -0.47
RAD50-201ENST00000378823 SEPT2Q15019 361 aa12.12□□□□□ -0.47
RAD50-201ENST00000378823 LCA5Q86VQ0 697 aa12.12□□□□□ -0.47
RAD50-201ENST00000378823 KRT82Q9NSB4 513 aa12.12□□□□□ -0.47
RAD50-201ENST00000378823 INTUQ9ULD6 942 aa12.12□□□□□ -0.47
RAD50-201ENST00000378823 WDR62O43379 1518 aa12.12□□□□□ -0.47
RAD50-201ENST00000378823 FOSP01100 380 aaPredicted RBP12.11□□□□□ -0.47
RAD50-201ENST00000378823 NR1D1P20393 614 aa12.11□□□□□ -0.47
RAD50-201ENST00000378823 GDAP1Q8TB36 358 aa12.11□□□□□ -0.47
RAD50-201ENST00000378823 ANLNQ9NQW6 1124 aa12.11□□□□□ -0.47
RAD50-201ENST00000378823 STK32BQ9NY57 414 aa12.11□□□□□ -0.47
RAD50-201ENST00000378823 BASP1P80723 227 aaKnown RBP12.11□□□□□ -0.47
RAD50-201ENST00000378823 ICA1Q05084 483 aa12.11□□□□□ -0.47
RAD50-201ENST00000378823 TAF11Q15544 211 aa12.11□□□□□ -0.47
RAD50-201ENST00000378823 LRRC23Q53EV4 343 aaPredicted RBP12.11□□□□□ -0.47
RAD50-201ENST00000378823 FBXL13Q8NEE6 735 aa12.11□□□□□ -0.47
RAD50-201ENST00000378823 CEP19Q96LK0 163 aa12.11□□□□□ -0.47
RAD50-201ENST00000378823 CALN1Q9BXU9 219 aa12.11□□□□□ -0.47
RAD50-201ENST00000378823 PACSIN2Q9UNF0 486 aaPredicted RBP12.11□□□□□ -0.47
RAD50-201ENST00000378823 MYH7P12883 1935 aa12.11□□□□□ -0.47
RAD50-201ENST00000378823 IPO5O00410 1097 aaKnown RBP12.11□□□□□ -0.47
RAD50-201ENST00000378823 MT-ND3P03897 115 aa12.11□□□□□ -0.47
RAD50-201ENST00000378823 ATP6V0A1Q93050 837 aa12.11□□□□□ -0.47
RAD50-201ENST00000378823 ZNF577Q9BSK1 485 aa12.11□□□□□ -0.47
RAD50-201ENST00000378823 RNF26Q9BY78 433 aaPredicted RBP12.11□□□□□ -0.47
RAD50-201ENST00000378823 ZMYND12Q9H0C1 365 aa12.11□□□□□ -0.47
RAD50-201ENST00000378823 AKT3Q9Y243 479 aa12.11□□□□□ -0.47
RAD50-201ENST00000378823 DCTN3O75935 186 aa12.11□□□□□ -0.47
RAD50-201ENST00000378823 DHX9Q08211 1270 aaKnown RBP12.11□□□□□ -0.47
RAD50-201ENST00000378823 THOC5Q13769 683 aaKnown RBP12.11□□□□□ -0.47
RAD50-201ENST00000378823 PKP1Q13835 747 aa12.11□□□□□ -0.47
RAD50-201ENST00000378823 DARS2Q6PI48 645 aaKnown RBP12.11□□□□□ -0.47
RAD50-201ENST00000378823 NRBP1Q9UHY1 535 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms