RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 PCDHA13Q9Y5I0 950 aa12.31□□□□□ -0.44
RPGR-203ENST00000378505 I3L4J1 428 aa12.31□□□□□ -0.44
RPGR-203ENST00000378505 MEIS1O00470 390 aa12.31□□□□□ -0.44
RPGR-203ENST00000378505 TNNC2P02585 160 aa12.31□□□□□ -0.44
RPGR-203ENST00000378505 NAA25Q14CX7 972 aa12.31□□□□□ -0.44
RPGR-203ENST00000378505 MIS12Q9H081 205 aa12.31□□□□□ -0.44
RPGR-203ENST00000378505 TMEM206Q9H813 350 aa12.31□□□□□ -0.44
RPGR-203ENST00000378505 NRBP2Q9NSY0 501 aa12.31□□□□□ -0.44
RPGR-203ENST00000378505 CLRN2A0PK11 232 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 THAP12O43422 761 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 STAT2P52630 851 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 UBXN2AP68543 259 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 SF3A3Q12874 501 aaKnown RBP eCLIP12.3□□□□□ -0.44
RPGR-203ENST00000378505 SH3RF3Q8TEJ3 882 aaPredicted RBP12.3□□□□□ -0.44
RPGR-203ENST00000378505 PBKQ96KB5 322 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 ANO3Q9BYT9 981 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 ANAPC4Q9UJX5 808 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 FAN1Q9Y2M0 1017 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 PNPLA7Q6ZV29 1317 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 MOCS3O95396 460 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 ATF7P17544 494 aaPredicted RBP12.3□□□□□ -0.44
RPGR-203ENST00000378505 PSMC4P43686 418 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 CDC37Q16543 378 aaPredicted RBP12.3□□□□□ -0.44
RPGR-203ENST00000378505 KCTD16Q68DU8 428 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 CASC4Q6P4E1 433 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 SHC4Q6S5L8 630 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 CTAGE3PQ8IX95 158 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 PALM2Q8IXS6 379 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 TTC16Q8NEE8 873 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 EXOC4Q96A65 974 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 PLA2G12BQ9BX93 195 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 SUGCTQ9HAC7 445 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 KLHL14Q9P2G3 628 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 ABCA9Q8IUA7 1624 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 OVOS2A0A0J9YW53 1432 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 OVOS2Q6IE36 1432 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 TMEM191BP0C7N4 346 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 PNMA6AP0CW24 399 aaPredicted RBP12.3□□□□□ -0.44
RPGR-203ENST00000378505 HSPA6P17066 643 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 CASP1P29466 404 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 CXCR5P32302 372 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 RASSF2P50749 326 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 PPP2R5AQ15172 486 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 CELF1Q92879 486 aaKnown RBP12.3□□□□□ -0.44
RPGR-203ENST00000378505 GCNT4Q9P109 453 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 FTCDO95954 541 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 ATF2P15336 505 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 MAN1A1P33908 653 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 PHBP35232 272 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 BAG6P46379 1132 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 DMTNQ08495 405 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 FAM182BQ5T319 152 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 UHMK1Q8TAS1 419 aaKnown RBP12.3□□□□□ -0.44
RPGR-203ENST00000378505 ARHGEF2Q92974 986 aaKnown RBP12.3□□□□□ -0.44
RPGR-203ENST00000378505 ZNF148Q9UQR1 794 aa12.3□□□□□ -0.44
RPGR-203ENST00000378505 ZNF335Q9H4Z2 1342 aaPredicted RBP12.29□□□□□ -0.44
RPGR-203ENST00000378505 DLC1Q96QB1 1528 aa12.29□□□□□ -0.44
RPGR-203ENST00000378505 PVALEFA0A1B0GWK0 134 aa12.29□□□□□ -0.44
RPGR-203ENST00000378505 PCK1P35558 622 aa12.29□□□□□ -0.44
RPGR-203ENST00000378505 DDIT3P35638 169 aa12.29□□□□□ -0.44
RPGR-203ENST00000378505 METTL13Q8N6R0 699 aa12.29□□□□□ -0.44
RPGR-203ENST00000378505 ADAMTS1Q9UHI8 967 aa12.29□□□□□ -0.44
RPGR-203ENST00000378505 CAPN7Q9Y6W3 813 aa12.29□□□□□ -0.44
RPGR-203ENST00000378505 CPDO75976 1380 aa12.29□□□□□ -0.44
RPGR-203ENST00000378505 TROVE2P10155 538 aaKnown RBP eCLIP12.29□□□□□ -0.44
RPGR-203ENST00000378505 CASP8Q14790 479 aa12.29□□□□□ -0.44
RPGR-203ENST00000378505 VPS52Q8N1B4 723 aa12.29□□□□□ -0.44
RPGR-203ENST00000378505 TRIM11Q96F44 468 aa12.29□□□□□ -0.44
RPGR-203ENST00000378505 FAM81BQ96LP2 452 aa12.29□□□□□ -0.44
RPGR-203ENST00000378505 BAIAP2L1Q9UHR4 511 aa12.29□□□□□ -0.44
RPGR-203ENST00000378505 PXDNLA1KZ92 1463 aa12.29□□□□□ -0.44
RPGR-203ENST00000378505 IQSEC2Q5JU85 1478 aa12.29□□□□□ -0.44
RPGR-203ENST00000378505 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.29□□□□□ -0.44
RPGR-203ENST00000378505 LRRN2O75325 713 aa12.29□□□□□ -0.44
RPGR-203ENST00000378505 RNF8O76064 485 aa12.29□□□□□ -0.44
RPGR-203ENST00000378505 GFPT2O94808 682 aa12.29□□□□□ -0.44
RPGR-203ENST00000378505 SEMA3FQ13275 785 aa12.29□□□□□ -0.44
RPGR-203ENST00000378505 AP3B2Q13367 1082 aa12.29□□□□□ -0.44
RPGR-203ENST00000378505 TAF12Q16514 161 aa12.29□□□□□ -0.44
RPGR-203ENST00000378505 ALKBH5Q6P6C2 394 aaKnown RBP12.29□□□□□ -0.44
RPGR-203ENST00000378505 PAGR1Q9BTK6 254 aa12.29□□□□□ -0.44
RPGR-203ENST00000378505 BHMT2Q9H2M3 363 aa12.29□□□□□ -0.44
RPGR-203ENST00000378505 ABHD10Q9NUJ1 306 aa12.29□□□□□ -0.44
RPGR-203ENST00000378505 NOD1Q9Y239 953 aa12.29□□□□□ -0.44
RPGR-203ENST00000378505 CEP152O94986 1710 aa12.29□□□□□ -0.44
RPGR-203ENST00000378505 BUB1BO60566 1050 aaPredicted RBP12.29□□□□□ -0.44
RPGR-203ENST00000378505 PRCPP42785 496 aa12.29□□□□□ -0.44
RPGR-203ENST00000378505 CCT5P48643 541 aa12.29□□□□□ -0.44
RPGR-203ENST00000378505 BFSP1Q12934 665 aa12.29□□□□□ -0.44
RPGR-203ENST00000378505 ORC2Q13416 577 aaPredicted RBP12.29□□□□□ -0.44
RPGR-203ENST00000378505 ATP2A3Q93084 1043 aa12.29□□□□□ -0.44
RPGR-203ENST00000378505 ZNF653Q96CK0 615 aa12.29□□□□□ -0.44
RPGR-203ENST00000378505 ADPGKQ9BRR6 497 aa12.29□□□□□ -0.44
RPGR-203ENST00000378505 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.29□□□□□ -0.44
RPGR-203ENST00000378505 TNS3Q68CZ2 1445 aa12.28□□□□□ -0.44
RPGR-203ENST00000378505 CCDC160A6NGH7 325 aa12.28□□□□□ -0.44
RPGR-203ENST00000378505 KIF28PB7ZC32 967 aa12.28□□□□□ -0.44
RPGR-203ENST00000378505 ORC4O43929 436 aa12.28□□□□□ -0.44
RPGR-203ENST00000378505 YARSP54577 528 aaKnown RBP12.28□□□□□ -0.44
RPGR-203ENST00000378505 LMNB2Q03252 620 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms