RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 E7ENQ6 273 aa12.79□□□□□ -0.36
NPHP4-202ENST00000378161 TSPAN9O75954 239 aa12.79□□□□□ -0.36
NPHP4-202ENST00000378161 BAG2O95816 211 aa12.79□□□□□ -0.36
NPHP4-202ENST00000378161 LINGO3P0C6S8 592 aa12.79□□□□□ -0.36
NPHP4-202ENST00000378161 RTN1Q16799 776 aa12.79□□□□□ -0.36
NPHP4-202ENST00000378161 ADCK5Q3MIX3 580 aa12.79□□□□□ -0.36
NPHP4-202ENST00000378161 ADALQ6DHV7 355 aa12.79□□□□□ -0.36
NPHP4-202ENST00000378161 LRRC43Q8N309 656 aa12.79□□□□□ -0.36
NPHP4-202ENST00000378161 FNBP4Q8N3X1 1017 aaPredicted RBP12.79□□□□□ -0.36
NPHP4-202ENST00000378161 PGBD1Q96JS3 809 aa12.79□□□□□ -0.36
NPHP4-202ENST00000378161 NCOA5Q9HCD5 579 aaKnown RBP12.79□□□□□ -0.36
NPHP4-202ENST00000378161 NKIRAS1Q9NYS0 192 aa12.79□□□□□ -0.36
NPHP4-202ENST00000378161 NDUFA13Q9P0J0 144 aa12.79□□□□□ -0.36
NPHP4-202ENST00000378161 EPN1Q9Y6I3 576 aaPredicted RBP12.79□□□□□ -0.36
NPHP4-202ENST00000378161 KDRP35968 1356 aa12.79□□□□□ -0.36
NPHP4-202ENST00000378161 ACTN4O43707 911 aaKnown RBP12.79□□□□□ -0.36
NPHP4-202ENST00000378161 BCRP11274 1271 aa12.79□□□□□ -0.36
NPHP4-202ENST00000378161 ITGB3BPQ13352 177 aaPredicted RBP12.79□□□□□ -0.36
NPHP4-202ENST00000378161 GCKRQ14397 625 aa12.79□□□□□ -0.36
NPHP4-202ENST00000378161 MLKLQ8NB16 471 aa12.79□□□□□ -0.36
NPHP4-202ENST00000378161 HYOU1Q9Y4L1 999 aa12.79□□□□□ -0.36
NPHP4-202ENST00000378161 CHD1O14646 1710 aa12.79□□□□□ -0.36
NPHP4-202ENST00000378161 H7C1W4 665 aa12.79□□□□□ -0.36
NPHP4-202ENST00000378161 ATP5HO75947 161 aa12.79□□□□□ -0.36
NPHP4-202ENST00000378161 KRT18P05783 430 aaKnown RBP12.79□□□□□ -0.36
NPHP4-202ENST00000378161 RNF220Q5VTB9 566 aa12.79□□□□□ -0.36
NPHP4-202ENST00000378161 KIF2BQ8N4N8 673 aa12.79□□□□□ -0.36
NPHP4-202ENST00000378161 ENAHQ8N8S7 591 aaPredicted RBP12.79□□□□□ -0.36
NPHP4-202ENST00000378161 LENG1Q96BZ8 264 aaPredicted RBP12.79□□□□□ -0.36
NPHP4-202ENST00000378161 MRPL44Q9H9J2 332 aaKnown RBP12.79□□□□□ -0.36
NPHP4-202ENST00000378161 LRCH1Q9Y2L9 728 aa12.79□□□□□ -0.36
NPHP4-202ENST00000378161 IGSF1Q8N6C5 1336 aa12.78□□□□□ -0.36
NPHP4-202ENST00000378161 HEXIM1O94992 359 aaKnown RBP12.78□□□□□ -0.36
NPHP4-202ENST00000378161 HSPA9P38646 679 aaKnown RBP12.78□□□□□ -0.36
NPHP4-202ENST00000378161 NOP14P78316 857 aaKnown RBP12.78□□□□□ -0.36
NPHP4-202ENST00000378161 MCL1Q07820 350 aa12.78□□□□□ -0.36
NPHP4-202ENST00000378161 R3HDM1Q15032 1099 aaKnown RBP12.78□□□□□ -0.36
NPHP4-202ENST00000378161 CHRNA2Q15822 529 aa12.78□□□□□ -0.36
NPHP4-202ENST00000378161 STAG2Q8N3U4 1231 aa12.78□□□□□ -0.36
NPHP4-202ENST00000378161 MMEP08473 750 aa12.78□□□□□ -0.36
NPHP4-202ENST00000378161 UBTFL6P0CB48 400 aaPredicted RBP12.78□□□□□ -0.36
NPHP4-202ENST00000378161 CETN2P41208 172 aa12.78□□□□□ -0.36
NPHP4-202ENST00000378161 TIMM10P62072 90 aa12.78□□□□□ -0.36
NPHP4-202ENST00000378161 USH1GQ495M9 461 aa12.78□□□□□ -0.36
NPHP4-202ENST00000378161 DDHD1Q8NEL9 900 aa12.78□□□□□ -0.36
NPHP4-202ENST00000378161 ZIM3Q96PE6 472 aa12.78□□□□□ -0.36
NPHP4-202ENST00000378161 UBE2OQ9C0C9 1292 aaKnown RBP12.78□□□□□ -0.36
NPHP4-202ENST00000378161 ANGPTL2Q9UKU9 493 aa12.78□□□□□ -0.36
NPHP4-202ENST00000378161 CFAP74Q9C0B2 1584 aa12.78□□□□□ -0.36
NPHP4-202ENST00000378161 IQSEC2Q5JU85 1478 aa12.78□□□□□ -0.36
NPHP4-202ENST00000378161 KRI1Q8N9T8 703 aaKnown RBP12.78□□□□□ -0.36
NPHP4-202ENST00000378161 RUBCNQ92622 972 aa12.78□□□□□ -0.36
NPHP4-202ENST00000378161 CNKSR1Q969H4 720 aa12.78□□□□□ -0.36
NPHP4-202ENST00000378161 DCAF5Q96JK2 942 aa12.78□□□□□ -0.36
NPHP4-202ENST00000378161 USP28Q96RU2 1077 aa12.78□□□□□ -0.36
NPHP4-202ENST00000378161 SCHIP1Q9P0W5 487 aaPredicted RBP12.78□□□□□ -0.36
NPHP4-202ENST00000378161 NFU1Q9UMS0 254 aa12.78□□□□□ -0.36
NPHP4-202ENST00000378161 EYA2O00167 538 aa12.77□□□□□ -0.36
NPHP4-202ENST00000378161 SLC26A4O43511 780 aa12.77□□□□□ -0.36
NPHP4-202ENST00000378161 VHLP40337 213 aa12.77□□□□□ -0.36
NPHP4-202ENST00000378161 STX17P56962 302 aa12.77□□□□□ -0.36
NPHP4-202ENST00000378161 MRPS25P82663 173 aaKnown RBP12.77□□□□□ -0.36
NPHP4-202ENST00000378161 RBM43Q6ZSC3 357 aaKnown RBP12.77□□□□□ -0.36
NPHP4-202ENST00000378161 CORO1BQ9BR76 489 aa12.77□□□□□ -0.36
NPHP4-202ENST00000378161 LZTS1Q9Y250 596 aa12.77□□□□□ -0.36
NPHP4-202ENST00000378161 KAT6BQ8WYB5 2073 aa12.77□□□□□ -0.36
NPHP4-202ENST00000378161 CCDC194A0A1B0GVG4 234 aa12.77□□□□□ -0.37
NPHP4-202ENST00000378161 A0A1W2PRG0 241 aa12.77□□□□□ -0.37
NPHP4-202ENST00000378161 ANKRD62A6NC57 917 aa12.77□□□□□ -0.37
NPHP4-202ENST00000378161 TRIM75PA6NK02 468 aa12.77□□□□□ -0.37
NPHP4-202ENST00000378161 CAVIN4Q5BKX8 364 aa12.77□□□□□ -0.37
NPHP4-202ENST00000378161 ANO5Q75V66 913 aa12.77□□□□□ -0.37
NPHP4-202ENST00000378161 ERICH1Q86X53 443 aa12.77□□□□□ -0.37
NPHP4-202ENST00000378161 DSCC1Q9BVC3 393 aa12.77□□□□□ -0.37
NPHP4-202ENST00000378161 GPCPD1Q9NPB8 672 aa12.77□□□□□ -0.37
NPHP4-202ENST00000378161 ABCF3Q9NUQ8 709 aa12.77□□□□□ -0.37
NPHP4-202ENST00000378161 MYCLP1P12525 358 aaPredicted RBP12.77□□□□□ -0.37
NPHP4-202ENST00000378161 DCTN2Q13561 401 aaKnown RBP12.77□□□□□ -0.37
NPHP4-202ENST00000378161 MAP3K21Q5TCX8 1036 aa12.77□□□□□ -0.37
NPHP4-202ENST00000378161 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.77□□□□□ -0.37
NPHP4-202ENST00000378161 TTC1Q99614 292 aa12.77□□□□□ -0.37
NPHP4-202ENST00000378161 SH2D4AQ9H788 454 aa12.77□□□□□ -0.37
NPHP4-202ENST00000378161 ZC4H2Q9NQZ6 224 aa12.77□□□□□ -0.37
NPHP4-202ENST00000378161 TBC1D23Q9NUY8 699 aa12.77□□□□□ -0.37
NPHP4-202ENST00000378161 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.77□□□□□ -0.37
NPHP4-202ENST00000378161 PALM3A6NDB9 673 aaPredicted RBP12.76□□□□□ -0.37
NPHP4-202ENST00000378161 SRRM3A6NNA2 597 aaPredicted RBP12.76□□□□□ -0.37
NPHP4-202ENST00000378161 DNAJC6O75061 913 aa12.76□□□□□ -0.37
NPHP4-202ENST00000378161 FGFR1OPO95684 399 aaKnown RBP12.76□□□□□ -0.37
NPHP4-202ENST00000378161 PENKP01210 267 aaPredicted RBP12.76□□□□□ -0.37
NPHP4-202ENST00000378161 AFMP43652 599 aa12.76□□□□□ -0.37
NPHP4-202ENST00000378161 SERPINB8P50452 374 aa12.76□□□□□ -0.37
NPHP4-202ENST00000378161 MMS19Q96T76 1030 aa12.76□□□□□ -0.37
NPHP4-202ENST00000378161 SLC39A3Q9BRY0 314 aa12.76□□□□□ -0.37
NPHP4-202ENST00000378161 TMEM2Q9UHN6 1383 aa12.76□□□□□ -0.37
NPHP4-202ENST00000378161 ABCC3O15438 1527 aa12.76□□□□□ -0.37
NPHP4-202ENST00000378161 SRGAP2O75044 1071 aa12.76□□□□□ -0.37
NPHP4-202ENST00000378161 GFPT2O94808 682 aa12.76□□□□□ -0.37
NPHP4-202ENST00000378161 ATP6V1C1P21283 382 aa12.76□□□□□ -0.37
NPHP4-202ENST00000378161 SP100P23497 879 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms