RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 KMT5BQ4FZB7 885 aa16.42■□□□□ 0.22
NPHP4-201ENST00000378156 ADPGKQ9BRR6 497 aa16.42■□□□□ 0.22
NPHP4-201ENST00000378156 RIC8AQ9NPQ8 531 aa16.42■□□□□ 0.22
NPHP4-201ENST00000378156 DAPK3O43293 454 aa16.41■□□□□ 0.22
NPHP4-201ENST00000378156 MFAP3LO75121 409 aa16.41■□□□□ 0.22
NPHP4-201ENST00000378156 CCDC105Q8IYK2 499 aa16.41■□□□□ 0.22
NPHP4-201ENST00000378156 NACC1Q96RE7 527 aa16.41■□□□□ 0.22
NPHP4-201ENST00000378156 H2AFZP0C0S5 128 aa16.41■□□□□ 0.22
NPHP4-201ENST00000378156 ARL1P40616 181 aaPredicted RBP16.41■□□□□ 0.22
NPHP4-201ENST00000378156 CYP27A1Q02318 531 aa16.41■□□□□ 0.22
NPHP4-201ENST00000378156 NFIXQ14938 502 aa16.41■□□□□ 0.22
NPHP4-201ENST00000378156 CFAP157Q5JU67 520 aa16.41■□□□□ 0.22
NPHP4-201ENST00000378156 H2AFVQ71UI9 128 aa16.41■□□□□ 0.22
NPHP4-201ENST00000378156 FAM160B2Q86V87 743 aa16.41■□□□□ 0.22
NPHP4-201ENST00000378156 SGMS1Q86VZ5 419 aa16.41■□□□□ 0.22
NPHP4-201ENST00000378156 ZNF579Q8NAF0 562 aaKnown RBP16.41■□□□□ 0.22
NPHP4-201ENST00000378156 FAM84BQ96KN1 310 aaPredicted RBP16.41■□□□□ 0.22
NPHP4-201ENST00000378156 TMEM47Q9BQJ4 181 aa16.41■□□□□ 0.22
NPHP4-201ENST00000378156 CLGNO14967 610 aa16.41■□□□□ 0.22
NPHP4-201ENST00000378156 GH2P01242 217 aa16.41■□□□□ 0.22
NPHP4-201ENST00000378156 PSMC4P43686 418 aa16.41■□□□□ 0.22
NPHP4-201ENST00000378156 UBE2SQ16763 222 aa16.41■□□□□ 0.22
NPHP4-201ENST00000378156 VSIG1Q86XK7 387 aa16.41■□□□□ 0.22
NPHP4-201ENST00000378156 NDUFA10O95299 355 aa16.41■□□□□ 0.22
NPHP4-201ENST00000378156 ASNSP08243 561 aa16.41■□□□□ 0.22
NPHP4-201ENST00000378156 GAP43P17677 238 aa16.41■□□□□ 0.22
NPHP4-201ENST00000378156 TMOD1P28289 359 aa16.41■□□□□ 0.22
NPHP4-201ENST00000378156 AOC3Q16853 763 aa16.41■□□□□ 0.22
NPHP4-201ENST00000378156 TCP11X2Q5H9J9 407 aa16.41■□□□□ 0.22
NPHP4-201ENST00000378156 FAM160B1Q5W0V3 765 aa16.41■□□□□ 0.22
NPHP4-201ENST00000378156 PNMA8AQ86V59 439 aaPredicted RBP16.41■□□□□ 0.22
NPHP4-201ENST00000378156 POMGNT1Q8WZA1 660 aa16.41■□□□□ 0.22
NPHP4-201ENST00000378156 ST7Q9NRC1 585 aa16.41■□□□□ 0.22
NPHP4-201ENST00000378156 DISC1Q9NRI5 854 aa16.41■□□□□ 0.22
NPHP4-201ENST00000378156 PLEKHG2Q9H7P9 1386 aa16.41■□□□□ 0.22
NPHP4-201ENST00000378156 SETSIPP0DME0 302 aa16.4■□□□□ 0.22
NPHP4-201ENST00000378156 CCNE1P24864 410 aa16.4■□□□□ 0.22
NPHP4-201ENST00000378156 SH3BGRP55822 239 aaPredicted RBP16.4■□□□□ 0.22
NPHP4-201ENST00000378156 CCNA1P78396 465 aa16.4■□□□□ 0.22
NPHP4-201ENST00000378156 TXNRD1Q16881 649 aa16.4■□□□□ 0.22
NPHP4-201ENST00000378156 CEP85LQ5SZL2 805 aa16.4■□□□□ 0.22
NPHP4-201ENST00000378156 CCDC117Q8IWD4 279 aaPredicted RBP16.4■□□□□ 0.22
NPHP4-201ENST00000378156 PLA2G12BQ9BX93 195 aa16.4■□□□□ 0.22
NPHP4-201ENST00000378156 CPVLQ9H3G5 476 aa16.4■□□□□ 0.22
NPHP4-201ENST00000378156 ADD3Q9UEY8 706 aaKnown RBP16.4■□□□□ 0.22
NPHP4-201ENST00000378156 UTYO14607 1347 aa16.4■□□□□ 0.22
NPHP4-201ENST00000378156 EHHADHQ08426 723 aa16.4■□□□□ 0.22
NPHP4-201ENST00000378156 PPP1R12CQ9BZL4 782 aa16.4■□□□□ 0.22
NPHP4-201ENST00000378156 VWDEQ8N2E2 1590 aa16.4■□□□□ 0.22
NPHP4-201ENST00000378156 HNRNPDLO14979 420 aaKnown RBP16.4■□□□□ 0.22
NPHP4-201ENST00000378156 CTDNEP1O95476 244 aa16.4■□□□□ 0.22
NPHP4-201ENST00000378156 FAM47CQ5HY64 1035 aa16.4■□□□□ 0.22
NPHP4-201ENST00000378156 SLC7A3Q8WY07 619 aa16.4■□□□□ 0.22
NPHP4-201ENST00000378156 CDHR1Q96JP9 859 aa16.4■□□□□ 0.22
NPHP4-201ENST00000378156 PIM2Q9P1W9 311 aa16.4■□□□□ 0.22
NPHP4-201ENST00000378156 PLCB1Q9NQ66 1216 aa16.4■□□□□ 0.22
NPHP4-201ENST00000378156 SH3GLB2Q9NR46 395 aa16.4■□□□□ 0.22
NPHP4-201ENST00000378156 DNAJC5Q9H3Z4 198 aa16.39■□□□□ 0.22
NPHP4-201ENST00000378156 TDRD3Q9H7E2 651 aaKnown RBP16.39■□□□□ 0.22
NPHP4-201ENST00000378156 CCDC151A5D8V7 595 aa16.39■□□□□ 0.21
NPHP4-201ENST00000378156 TNNC2P02585 160 aa16.39■□□□□ 0.21
NPHP4-201ENST00000378156 FDPSP14324 419 aaKnown RBP16.39■□□□□ 0.21
NPHP4-201ENST00000378156 SF3A3Q12874 501 aaKnown RBP eCLIP16.39■□□□□ 0.216e-7■■■■■ 34.3
NPHP4-201ENST00000378156 RETREG2Q8NC44 543 aa16.39■□□□□ 0.21
NPHP4-201ENST00000378156 SLC44A5Q8NCS7 719 aa16.39■□□□□ 0.21
NPHP4-201ENST00000378156 DPF2Q92785 391 aa16.39■□□□□ 0.21
NPHP4-201ENST00000378156 AGLP35573 1532 aa16.39■□□□□ 0.21
NPHP4-201ENST00000378156 RCAN1P53805 252 aa16.39■□□□□ 0.21
NPHP4-201ENST00000378156 YARSP54577 528 aaKnown RBP16.39■□□□□ 0.21
NPHP4-201ENST00000378156 TPD52P55327 224 aaPredicted RBP16.39■□□□□ 0.21
NPHP4-201ENST00000378156 KRT71Q3SY84 523 aa16.39■□□□□ 0.21
NPHP4-201ENST00000378156 MAIP1Q8WWC4 291 aa16.39■□□□□ 0.21
NPHP4-201ENST00000378156 USP32Q8NFA0 1604 aa16.39■□□□□ 0.21
NPHP4-201ENST00000378156 NDC80O14777 642 aa16.39■□□□□ 0.21
NPHP4-201ENST00000378156 ATP8B1O43520 1251 aa16.39■□□□□ 0.21
NPHP4-201ENST00000378156 PNMA6AP0CW24 399 aaPredicted RBP16.39■□□□□ 0.21
NPHP4-201ENST00000378156 PPP2R5AQ15172 486 aa16.39■□□□□ 0.21
NPHP4-201ENST00000378156 UAP1Q16222 522 aaPredicted RBP16.39■□□□□ 0.21
NPHP4-201ENST00000378156 PHLDB2Q86SQ0 1253 aa16.39■□□□□ 0.21
NPHP4-201ENST00000378156 METTL16Q86W50 562 aaKnown RBP16.39■□□□□ 0.21
NPHP4-201ENST00000378156 MCUR1Q96AQ8 359 aa16.39■□□□□ 0.21
NPHP4-201ENST00000378156 TRIM49BA6NDI0 452 aa16.38■□□□□ 0.21
NPHP4-201ENST00000378156 MEIS1O00470 390 aa16.38■□□□□ 0.21
NPHP4-201ENST00000378156 TEX33O43247 280 aa16.38■□□□□ 0.21
NPHP4-201ENST00000378156 TMEM191BP0C7N4 346 aa16.38■□□□□ 0.21
NPHP4-201ENST00000378156 ATP1A2P50993 1020 aa16.38■□□□□ 0.21
NPHP4-201ENST00000378156 MAN2A1Q16706 1144 aa16.38■□□□□ 0.21
NPHP4-201ENST00000378156 ANO3Q9BYT9 981 aa16.38■□□□□ 0.21
NPHP4-201ENST00000378156 SEPT9Q9UHD8 586 aaPredicted RBP16.38■□□□□ 0.21
NPHP4-201ENST00000378156 KRIT1O00522 736 aa16.38■□□□□ 0.21
NPHP4-201ENST00000378156 GAS8O95995 478 aa16.38■□□□□ 0.21
NPHP4-201ENST00000378156 CXCR5P32302 372 aa16.38■□□□□ 0.21
NPHP4-201ENST00000378156 ANTXR2P58335 489 aa16.38■□□□□ 0.21
NPHP4-201ENST00000378156 ZBED6P86452 979 aa16.38■□□□□ 0.21
NPHP4-201ENST00000378156 DPP9Q86TI2 863 aa16.38■□□□□ 0.21
NPHP4-201ENST00000378156 SLC17A8Q8NDX2 589 aa16.38■□□□□ 0.21
NPHP4-201ENST00000378156 FAM71BQ8TC56 605 aa16.38■□□□□ 0.21
NPHP4-201ENST00000378156 MED4Q9NPJ6 270 aa16.38■□□□□ 0.21
NPHP4-201ENST00000378156 FAM184BQ9ULE4 1060 aa16.38■□□□□ 0.21
NPHP4-201ENST00000378156 MROH7-TTC4A0A0A0MT08 1334 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms