RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 IFNLR1Q8IU57 520 aaPredicted RBP13.02□□□□□ -0.33
PCDHA9-201ENST00000378122 P2RX5Q93086 422 aa13.02□□□□□ -0.33
PCDHA9-201ENST00000378122 OLA1Q9NTK5 396 aaKnown RBP13.02□□□□□ -0.33
PCDHA9-201ENST00000378122 FAF1Q9UNN5 650 aaPredicted RBP13.02□□□□□ -0.33
PCDHA9-201ENST00000378122 TBX22Q9Y458 520 aa13.02□□□□□ -0.33
PCDHA9-201ENST00000378122 P4HA1P13674 534 aa13.02□□□□□ -0.33
PCDHA9-201ENST00000378122 RESTQ13127 1097 aa13.02□□□□□ -0.33
PCDHA9-201ENST00000378122 TMED2Q15363 201 aa13.02□□□□□ -0.33
PCDHA9-201ENST00000378122 ARMCX5Q6P1M9 558 aa13.02□□□□□ -0.33
PCDHA9-201ENST00000378122 FAM178BQ8IXR5 827 aa13.02□□□□□ -0.33
PCDHA9-201ENST00000378122 SGK1O00141 431 aa13.02□□□□□ -0.33
PCDHA9-201ENST00000378122 KIF23Q02241 960 aaPredicted RBP13.02□□□□□ -0.33
PCDHA9-201ENST00000378122 CHRNDQ07001 517 aa13.02□□□□□ -0.33
PCDHA9-201ENST00000378122 GALNT17Q6IS24 598 aa13.02□□□□□ -0.33
PCDHA9-201ENST00000378122 GDAP1Q8TB36 358 aa13.02□□□□□ -0.33
PCDHA9-201ENST00000378122 OSBPL3Q9H4L5 887 aa13.02□□□□□ -0.33
PCDHA9-201ENST00000378122 DPYSL4O14531 572 aa13.02□□□□□ -0.33
PCDHA9-201ENST00000378122 MARK3P27448 753 aa13.02□□□□□ -0.33
PCDHA9-201ENST00000378122 BTDP43251 543 aa13.02□□□□□ -0.33
PCDHA9-201ENST00000378122 PHKA1P46020 1223 aa13.02□□□□□ -0.33
PCDHA9-201ENST00000378122 IL9RQ01113 521 aa13.02□□□□□ -0.33
PCDHA9-201ENST00000378122 FAM26FQ5R3K3 315 aa13.02□□□□□ -0.33
PCDHA9-201ENST00000378122 TRIM50Q86XT4 487 aa13.02□□□□□ -0.33
PCDHA9-201ENST00000378122 GJA10Q969M2 543 aa13.02□□□□□ -0.33
PCDHA9-201ENST00000378122 GREM2Q9H772 168 aa13.02□□□□□ -0.33
PCDHA9-201ENST00000378122 ZNF148Q9UQR1 794 aa13.02□□□□□ -0.33
PCDHA9-201ENST00000378122 PHKG2P15735 406 aa13.01□□□□□ -0.33
PCDHA9-201ENST00000378122 RCN2Q14257 317 aa13.01□□□□□ -0.33
PCDHA9-201ENST00000378122 ZKSCAN8Q15776 578 aaPredicted RBP13.01□□□□□ -0.33
PCDHA9-201ENST00000378122 DBN1Q16643 649 aa13.01□□□□□ -0.33
PCDHA9-201ENST00000378122 FAM133AQ8N9E0 248 aa13.01□□□□□ -0.33
PCDHA9-201ENST00000378122 LINC00301Q8NCQ3 95 aa13.01□□□□□ -0.33
PCDHA9-201ENST00000378122 WDR48Q8TAF3 677 aa13.01□□□□□ -0.33
PCDHA9-201ENST00000378122 GSDMAQ96QA5 445 aa13.01□□□□□ -0.33
PCDHA9-201ENST00000378122 KCNH4Q9UQ05 1017 aa13.01□□□□□ -0.33
PCDHA9-201ENST00000378122 PCDHA13Q9Y5I0 950 aa13.01□□□□□ -0.33
PCDHA9-201ENST00000378122 ESYT2A0FGR8 921 aa13.01□□□□□ -0.33
PCDHA9-201ENST00000378122 PNMA6AP0CW24 399 aaPredicted RBP13.01□□□□□ -0.33
PCDHA9-201ENST00000378122 LMNB1P20700 586 aa13.01□□□□□ -0.33
PCDHA9-201ENST00000378122 CASP8Q14790 479 aa13.01□□□□□ -0.33
PCDHA9-201ENST00000378122 TEKT3Q9BXF9 490 aa13.01□□□□□ -0.33
PCDHA9-201ENST00000378122 JRKLQ9Y4A0 524 aa13.01□□□□□ -0.33
PCDHA9-201ENST00000378122 A0A0G2JLW4 131 aa13.01□□□□□ -0.33
PCDHA9-201ENST00000378122 POLR2MP0CAP2 368 aa13.01□□□□□ -0.33
PCDHA9-201ENST00000378122 RFX6Q8HWS3 928 aa13.01□□□□□ -0.33
PCDHA9-201ENST00000378122 ALKBH8Q96BT7 664 aaKnown RBP13.01□□□□□ -0.33
PCDHA9-201ENST00000378122 ASAP1Q9ULH1 1129 aa13.01□□□□□ -0.33
PCDHA9-201ENST00000378122 TOGARAM2Q6ZUX3 1019 aa13.01□□□□□ -0.33
PCDHA9-201ENST00000378122 RWDD2AQ9UIY3 292 aa13.01□□□□□ -0.33
PCDHA9-201ENST00000378122 PFDN1O60925 122 aa13.01□□□□□ -0.33
PCDHA9-201ENST00000378122 CYP4A11Q02928 519 aa13.01□□□□□ -0.33
PCDHA9-201ENST00000378122 RPS6KA2Q15349 733 aa13.01□□□□□ -0.33
PCDHA9-201ENST00000378122 MAGOHBQ96A72 148 aaKnown RBP13.01□□□□□ -0.33
PCDHA9-201ENST00000378122 CCDC127Q96BQ5 260 aa13.01□□□□□ -0.33
PCDHA9-201ENST00000378122 RUNDC3BQ96NL0 473 aa13.01□□□□□ -0.33
PCDHA9-201ENST00000378122 ITM2BQ9Y287 266 aa13.01□□□□□ -0.33
PCDHA9-201ENST00000378122 MMP1P03956 469 aa13□□□□□ -0.33
PCDHA9-201ENST00000378122 TERF2Q15554 542 aa13□□□□□ -0.33
PCDHA9-201ENST00000378122 BBOF1Q8ND07 529 aa13□□□□□ -0.33
PCDHA9-201ENST00000378122 TBC1D22AQ8WUA7 517 aa13□□□□□ -0.33
PCDHA9-201ENST00000378122 LARSQ9P2J5 1176 aaKnown RBP13□□□□□ -0.33
PCDHA9-201ENST00000378122 ABCC12Q96J65 1359 aa13□□□□□ -0.33
PCDHA9-201ENST00000378122 SH3BGRP55822 239 aaPredicted RBP13□□□□□ -0.33
PCDHA9-201ENST00000378122 POLA2Q14181 598 aa13□□□□□ -0.33
PCDHA9-201ENST00000378122 INPP5FQ9Y2H2 1132 aa13□□□□□ -0.33
PCDHA9-201ENST00000378122 TAF11Q15544 211 aa13□□□□□ -0.33
PCDHA9-201ENST00000378122 AOC3Q16853 763 aa13□□□□□ -0.33
PCDHA9-201ENST00000378122 LARP4BQ92615 738 aaKnown RBP13□□□□□ -0.33
PCDHA9-201ENST00000378122 MTRQ99707 1265 aa13□□□□□ -0.33
PCDHA9-201ENST00000378122 CAPN9O14815 690 aa13□□□□□ -0.33
PCDHA9-201ENST00000378122 AFPP02771 609 aaKnown RBP13□□□□□ -0.33
PCDHA9-201ENST00000378122 EEF1GP26641 437 aaKnown RBP13□□□□□ -0.33
PCDHA9-201ENST00000378122 TMOD1P28289 359 aa13□□□□□ -0.33
PCDHA9-201ENST00000378122 PLTPP55058 493 aa13□□□□□ -0.33
PCDHA9-201ENST00000378122 YWHAGP61981 247 aaKnown RBP eCLIP13□□□□□ -0.33
PCDHA9-201ENST00000378122 CHURC1Q8WUH1 139 aa13□□□□□ -0.33
PCDHA9-201ENST00000378122 OTUD5Q96G74 571 aa13□□□□□ -0.33
PCDHA9-201ENST00000378122 DHTKD1Q96HY7 919 aaPredicted RBP13□□□□□ -0.33
PCDHA9-201ENST00000378122 MAD1L1Q9Y6D9 718 aa13□□□□□ -0.33
PCDHA9-201ENST00000378122 UPP2O95045 317 aa13□□□□□ -0.33
PCDHA9-201ENST00000378122 SLCO1A2P46721 670 aa13□□□□□ -0.33
PCDHA9-201ENST00000378122 APOA5Q6Q788 366 aa13□□□□□ -0.33
PCDHA9-201ENST00000378122 NLRP7Q8WX94 980 aa13□□□□□ -0.33
PCDHA9-201ENST00000378122 FRMD4AQ9P2Q2 1039 aaPredicted RBP13□□□□□ -0.33
PCDHA9-201ENST00000378122 COL4A3BPQ9Y5P4 624 aa13□□□□□ -0.33
PCDHA9-201ENST00000378122 CLASP1Q7Z460 1538 aa13□□□□□ -0.33
PCDHA9-201ENST00000378122 KIF1BO60333 1816 aa13□□□□□ -0.33
PCDHA9-201ENST00000378122 MAGI3Q5TCQ9 1506 aa13□□□□□ -0.33
PCDHA9-201ENST00000378122 TNNC2P02585 160 aa12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 FBXO11Q86XK2 927 aa12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 PLA2G4DQ86XP0 818 aa12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 PGBD3Q8N328 593 aa12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 IWS1Q96ST2 819 aa12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 VCX3AQ9NNX9 186 aa12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 ERVK-7P63135 1459 aa12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 DYNLL1P63167 89 aaKnown RBP12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 DMP1Q13316 513 aaPredicted RBP12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 PAGE5Q96GU1 130 aa12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 MYO5CQ9NQX4 1742 aa12.99□□□□□ -0.33
PCDHA9-201ENST00000378122 ERVV-2B6SEH9 535 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms