RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 MFAP3P55082 362 aa17.69■□□□□ 0.42
RGP1-201ENST00000378078 ABTB1Q969K4 478 aaPredicted RBP17.69■□□□□ 0.42
RGP1-201ENST00000378078 ERBB3P21860 1342 aa17.69■□□□□ 0.42
RGP1-201ENST00000378078 GTPBP6O43824 516 aaPredicted RBP17.68■□□□□ 0.42
RGP1-201ENST00000378078 SERPIND1P05546 499 aa17.68■□□□□ 0.42
RGP1-201ENST00000378078 CCNA1P78396 465 aa17.68■□□□□ 0.42
RGP1-201ENST00000378078 PTGDRQ13258 359 aa17.68■□□□□ 0.42
RGP1-201ENST00000378078 CCDC85BQ15834 202 aaPredicted RBP17.68■□□□□ 0.42
RGP1-201ENST00000378078 CEP19Q96LK0 163 aa17.68■□□□□ 0.42
RGP1-201ENST00000378078 TNKSO95271 1327 aa17.68■□□□□ 0.42
RGP1-201ENST00000378078 PLS3P13797 630 aa17.68■□□□□ 0.42
RGP1-201ENST00000378078 CACNB3P54284 484 aa17.68■□□□□ 0.42
RGP1-201ENST00000378078 C10orf76Q5T2E6 689 aa17.68■□□□□ 0.42
RGP1-201ENST00000378078 STAG1Q8WVM7 1258 aa17.68■□□□□ 0.42
RGP1-201ENST00000378078 DENND3A2RUS2 1198 aa17.68■□□□□ 0.42
RGP1-201ENST00000378078 GOLGA8MH3BSY2 632 aa17.68■□□□□ 0.42
RGP1-201ENST00000378078 MAML1Q92585 1016 aa17.68■□□□□ 0.42
RGP1-201ENST00000378078 SNX21Q969T3 373 aa17.68■□□□□ 0.42
RGP1-201ENST00000378078 CCDC195A0A1B0GUA6 201 aa17.68■□□□□ 0.42
RGP1-201ENST00000378078 MRPS25P82663 173 aaKnown RBP17.68■□□□□ 0.42
RGP1-201ENST00000378078 ARHGEF6Q15052 776 aa17.68■□□□□ 0.42
RGP1-201ENST00000378078 SCYL3Q8IZE3 742 aa17.68■□□□□ 0.42
RGP1-201ENST00000378078 PPP1R36Q96LQ0 422 aa17.68■□□□□ 0.42
RGP1-201ENST00000378078 SAMSN1Q9NSI8 373 aaKnown RBP17.68■□□□□ 0.42
RGP1-201ENST00000378078 PTH1RQ03431 593 aa17.68■□□□□ 0.42
RGP1-201ENST00000378078 POLD4Q9HCU8 107 aa17.68■□□□□ 0.42
RGP1-201ENST00000378078 BCAP29Q9UHQ4 241 aa17.68■□□□□ 0.42
RGP1-201ENST00000378078 SLC4A7Q9Y6M7 1214 aa17.68■□□□□ 0.42
RGP1-201ENST00000378078 CTTNQ14247 550 aaKnown RBP17.68■□□□□ 0.42
RGP1-201ENST00000378078 CNOT6LQ96LI5 555 aaKnown RBP17.67■□□□□ 0.42
RGP1-201ENST00000378078 TTC1Q99614 292 aa17.67■□□□□ 0.42
RGP1-201ENST00000378078 TRPC7Q9HCX4 862 aa17.67■□□□□ 0.42
RGP1-201ENST00000378078 PPP1R9AQ9ULJ8 1098 aa17.67■□□□□ 0.42
RGP1-201ENST00000378078 NEURL1BA8MQ27 555 aa17.67■□□□□ 0.42
RGP1-201ENST00000378078 ART3Q13508 389 aa17.67■□□□□ 0.42
RGP1-201ENST00000378078 PPHLN1Q8NEY8 458 aaKnown RBP17.67■□□□□ 0.42
RGP1-201ENST00000378078 CNKSR1Q969H4 720 aa17.67■□□□□ 0.42
RGP1-201ENST00000378078 MCF2LO15068 1137 aa17.67■□□□□ 0.42
RGP1-201ENST00000378078 CREB3O43889 395 aa17.67■□□□□ 0.42
RGP1-201ENST00000378078 DDX53Q86TM3 631 aaKnown RBP17.67■□□□□ 0.42
RGP1-201ENST00000378078 SMC5Q8IY18 1101 aa17.67■□□□□ 0.42
RGP1-201ENST00000378078 IWS1Q96ST2 819 aa17.67■□□□□ 0.42
RGP1-201ENST00000378078 RAPGEF5Q92565 580 aa17.67■□□□□ 0.42
RGP1-201ENST00000378078 MAGOHBQ96A72 148 aaKnown RBP17.67■□□□□ 0.42
RGP1-201ENST00000378078 DYNLL2Q96FJ2 89 aa17.67■□□□□ 0.42
RGP1-201ENST00000378078 ZNF496Q96IT1 587 aaPredicted RBP17.67■□□□□ 0.42
RGP1-201ENST00000378078 LLPHQ9BRT6 129 aaKnown RBP17.67■□□□□ 0.42
RGP1-201ENST00000378078 ZNF804BA4D1E1 1349 aa17.67■□□□□ 0.42
RGP1-201ENST00000378078 RBBP7Q16576 425 aa17.67■□□□□ 0.42
RGP1-201ENST00000378078 SLC27A3Q5K4L6 730 aa17.67■□□□□ 0.42
RGP1-201ENST00000378078 ARHGEF1Q92888 912 aaKnown RBP17.67■□□□□ 0.42
RGP1-201ENST00000378078 DDAH1O94760 285 aa17.66■□□□□ 0.42
RGP1-201ENST00000378078 RNF135Q8IUD6 432 aa17.66■□□□□ 0.42
RGP1-201ENST00000378078 PGBD3Q8N328 593 aa17.66■□□□□ 0.42
RGP1-201ENST00000378078 FAM133AQ8N9E0 248 aa17.66■□□□□ 0.42
RGP1-201ENST00000378078 SMAD5Q99717 465 aaKnown RBP17.66■□□□□ 0.42
RGP1-201ENST00000378078 A0A0D9SFI3 127 aa17.66■□□□□ 0.42
RGP1-201ENST00000378078 TMTC3Q6ZXV5 915 aa17.66■□□□□ 0.42
RGP1-201ENST00000378078 MAP10Q9P2G4 905 aa17.66■□□□□ 0.42
RGP1-201ENST00000378078 CDC25AP30304 524 aa17.66■□□□□ 0.42
RGP1-201ENST00000378078 TUBB4BP68371 445 aa17.66■□□□□ 0.42
RGP1-201ENST00000378078 SLC7A3Q8WY07 619 aa17.66■□□□□ 0.42
RGP1-201ENST00000378078 SGO2Q562F6 1265 aa17.66■□□□□ 0.42
RGP1-201ENST00000378078 POTEDQ86YR6 584 aa17.66■□□□□ 0.42
RGP1-201ENST00000378078 CYTH2Q99418 400 aa17.66■□□□□ 0.42
RGP1-201ENST00000378078 TLK1Q9UKI8 766 aa17.66■□□□□ 0.42
RGP1-201ENST00000378078 EIF2AK2P19525 551 aaKnown RBP17.66■□□□□ 0.42
RGP1-201ENST00000378078 ARL4AP40617 200 aa17.66■□□□□ 0.42
RGP1-201ENST00000378078 CRKLP46109 303 aaKnown RBP17.66■□□□□ 0.42
RGP1-201ENST00000378078 STAT2P52630 851 aa17.66■□□□□ 0.42
RGP1-201ENST00000378078 HDLBPQ00341 1268 aaKnown RBP17.66■□□□□ 0.42
RGP1-201ENST00000378078 LZICQ8WZA0 190 aa17.66■□□□□ 0.42
RGP1-201ENST00000378078 ZBTB40Q9NUA8 1239 aa17.66■□□□□ 0.42
RGP1-201ENST00000378078 TSKSQ9UJT2 592 aa17.66■□□□□ 0.42
RGP1-201ENST00000378078 SYF2O95926 243 aaKnown RBP17.66■□□□□ 0.42
RGP1-201ENST00000378078 SCG2P13521 617 aa17.66■□□□□ 0.42
RGP1-201ENST00000378078 NDUFA8P51970 172 aa17.66■□□□□ 0.42
RGP1-201ENST00000378078 DRP2Q13474 957 aa17.66■□□□□ 0.42
RGP1-201ENST00000378078 USP17L2Q6R6M4 530 aa17.66■□□□□ 0.42
RGP1-201ENST00000378078 NT5C1BQ96P26 610 aa17.66■□□□□ 0.42
RGP1-201ENST00000378078 RPF1Q9H9Y2 349 aaKnown RBP17.66■□□□□ 0.42
RGP1-201ENST00000378078 CYP2D7A0A087X1C5 515 aa17.65■□□□□ 0.42
RGP1-201ENST00000378078 ANP32DO95626 131 aa17.65■□□□□ 0.42
RGP1-201ENST00000378078 MSH2P43246 934 aa17.65■□□□□ 0.42
RGP1-201ENST00000378078 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.65■□□□□ 0.42
RGP1-201ENST00000378078 IFT43Q96FT9 208 aa17.65■□□□□ 0.42
RGP1-201ENST00000378078 ZNF341Q9BYN7 854 aa17.65■□□□□ 0.42
RGP1-201ENST00000378078 SEC31BQ9NQW1 1179 aa17.65■□□□□ 0.42
RGP1-201ENST00000378078 TYW1Q9NV66 732 aaKnown RBP17.65■□□□□ 0.42
RGP1-201ENST00000378078 HSPD1P10809 573 aaKnown RBP17.65■□□□□ 0.42
RGP1-201ENST00000378078 LIG3P49916 1009 aa17.65■□□□□ 0.42
RGP1-201ENST00000378078 OCRLQ01968 901 aa17.65■□□□□ 0.42
RGP1-201ENST00000378078 PDCD2Q16342 344 aaPredicted RBP17.65■□□□□ 0.42
RGP1-201ENST00000378078 FAM196AQ6ZSG2 479 aa17.65■□□□□ 0.42
RGP1-201ENST00000378078 PUS3Q9BZE2 481 aaKnown RBP17.65■□□□□ 0.42
RGP1-201ENST00000378078 TEKT2Q9UIF3 430 aa17.65■□□□□ 0.42
RGP1-201ENST00000378078 C21orf2O43822 256 aa17.65■□□□□ 0.42
RGP1-201ENST00000378078 SLC7A5Q01650 507 aa17.65■□□□□ 0.42
RGP1-201ENST00000378078 NME3Q13232 169 aa17.65■□□□□ 0.42
RGP1-201ENST00000378078 TCP11X2Q5H9J9 407 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms