RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 MAN2A1Q16706 1144 aa17.46■□□□□ 0.38
CKAP4-201ENST00000378026 HGSNATQ68CP4 663 aa17.46■□□□□ 0.38
CKAP4-201ENST00000378026 MSL1Q68DK7 614 aa17.46■□□□□ 0.38
CKAP4-201ENST00000378026 TRIM31Q9BZY9 425 aa17.46■□□□□ 0.38
CKAP4-201ENST00000378026 DDX47Q9H0S4 455 aaKnown RBP17.46■□□□□ 0.38
CKAP4-201ENST00000378026 SLC12A6Q9UHW9 1150 aa17.46■□□□□ 0.38
CKAP4-201ENST00000378026 TSKSQ9UJT2 592 aa17.46■□□□□ 0.38
CKAP4-201ENST00000378026 CCNT1O60563 726 aaKnown RBP17.45■□□□□ 0.38
CKAP4-201ENST00000378026 SLC9C1Q4G0N8 1177 aa17.45■□□□□ 0.38
CKAP4-201ENST00000378026 CCDC84Q86UT8 332 aaPredicted RBP17.45■□□□□ 0.38
CKAP4-201ENST00000378026 CCSER1Q9C0I3 900 aa17.45■□□□□ 0.38
CKAP4-201ENST00000378026 CPVLQ9H3G5 476 aa17.45■□□□□ 0.38
CKAP4-201ENST00000378026 PCDHA6Q9UN73 950 aa17.45■□□□□ 0.38
CKAP4-201ENST00000378026 PCDHA8Q9Y5H6 950 aa17.45■□□□□ 0.38
CKAP4-201ENST00000378026 CCDC189A1A4V9 331 aa17.45■□□□□ 0.38
CKAP4-201ENST00000378026 PPP2R2AP63151 447 aa17.45■□□□□ 0.38
CKAP4-201ENST00000378026 RAPGEF1Q13905 1077 aa17.45■□□□□ 0.38
CKAP4-201ENST00000378026 ASTE1Q2TB18 679 aaPredicted RBP17.45■□□□□ 0.38
CKAP4-201ENST00000378026 KRT71Q3SY84 523 aa17.45■□□□□ 0.38
CKAP4-201ENST00000378026 EMC10Q5UCC4 262 aa17.45■□□□□ 0.38
CKAP4-201ENST00000378026 CNNM4Q6P4Q7 775 aa17.45■□□□□ 0.38
CKAP4-201ENST00000378026 RNF10Q8N5U6 811 aaKnown RBP17.45■□□□□ 0.38
CKAP4-201ENST00000378026 USP38Q8NB14 1042 aa17.45■□□□□ 0.38
CKAP4-201ENST00000378026 PLCB1Q9NQ66 1216 aa17.45■□□□□ 0.38
CKAP4-201ENST00000378026 ANAPC4Q9UJX5 808 aa17.45■□□□□ 0.38
CKAP4-201ENST00000378026 PDE6BP35913 854 aa17.44■□□□□ 0.38
CKAP4-201ENST00000378026 DRP2Q13474 957 aa17.44■□□□□ 0.38
CKAP4-201ENST00000378026 BYSLQ13895 437 aaKnown RBP17.44■□□□□ 0.38
CKAP4-201ENST00000378026 GKAP1Q5VSY0 366 aaPredicted RBP17.44■□□□□ 0.38
CKAP4-201ENST00000378026 PNMA8AQ86V59 439 aaPredicted RBP17.44■□□□□ 0.38
CKAP4-201ENST00000378026 TCP11Q8WWU5 503 aa17.44■□□□□ 0.38
CKAP4-201ENST00000378026 INPP4AQ96PE3 977 aaPredicted RBP17.44■□□□□ 0.38
CKAP4-201ENST00000378026 KAT6BQ8WYB5 2073 aa17.44■□□□□ 0.38
CKAP4-201ENST00000378026 TLR2O60603 784 aa17.44■□□□□ 0.38
CKAP4-201ENST00000378026 STARD3NLO95772 234 aa17.44■□□□□ 0.38
CKAP4-201ENST00000378026 SFMBT2Q5VUG0 894 aa17.44■□□□□ 0.38
CKAP4-201ENST00000378026 RNF14Q9UBS8 474 aa17.44■□□□□ 0.38
CKAP4-201ENST00000378026 A0A087X0T9 212 aa17.44■□□□□ 0.38
CKAP4-201ENST00000378026 TMCO5BA8MYB1 307 aa17.44■□□□□ 0.38
CKAP4-201ENST00000378026 CLTAP09496 248 aa17.44■□□□□ 0.38
CKAP4-201ENST00000378026 FAM228BP0C875 321 aa17.44■□□□□ 0.38
CKAP4-201ENST00000378026 KCNMA1Q12791 1236 aa17.44■□□□□ 0.38
CKAP4-201ENST00000378026 MEI1Q5TIA1 1274 aa17.44■□□□□ 0.38
CKAP4-201ENST00000378026 THOC1Q96FV9 657 aaKnown RBP17.44■□□□□ 0.38
CKAP4-201ENST00000378026 RIOK1Q9BRS2 568 aaKnown RBP17.44■□□□□ 0.38
CKAP4-201ENST00000378026 TACO1Q9BSH4 297 aaKnown RBP17.44■□□□□ 0.38
CKAP4-201ENST00000378026 DPH5Q9H2P9 285 aa17.44■□□□□ 0.38
CKAP4-201ENST00000378026 TIAM2Q8IVF5 1701 aa17.44■□□□□ 0.38
CKAP4-201ENST00000378026 DAPK3O43293 454 aa17.43■□□□□ 0.38
CKAP4-201ENST00000378026 MYL1P05976 194 aa17.43■□□□□ 0.38
CKAP4-201ENST00000378026 TEX11Q8IYF3 940 aa17.43■□□□□ 0.38
CKAP4-201ENST00000378026 LSM14BQ9BX40 385 aaKnown RBP17.43■□□□□ 0.38
CKAP4-201ENST00000378026 ISCUQ9H1K1 167 aa17.43■□□□□ 0.38
CKAP4-201ENST00000378026 KCPQ6ZWJ8 1503 aa17.43■□□□□ 0.38
CKAP4-201ENST00000378026 FLT1P17948 1338 aa17.43■□□□□ 0.38
CKAP4-201ENST00000378026 SMIM23A6NLE4 172 aa17.43■□□□□ 0.38
CKAP4-201ENST00000378026 H0YGN5 161 aa17.43■□□□□ 0.38
CKAP4-201ENST00000378026 ECHS1P30084 290 aa17.43■□□□□ 0.38
CKAP4-201ENST00000378026 CDC25CP30307 473 aa17.43■□□□□ 0.38
CKAP4-201ENST00000378026 RPS6KA1Q15418 735 aa17.43■□□□□ 0.38
CKAP4-201ENST00000378026 NAB2Q15742 525 aa17.43■□□□□ 0.38
CKAP4-201ENST00000378026 NAIF1Q69YI7 327 aaPredicted RBP17.43■□□□□ 0.38
CKAP4-201ENST00000378026 CENPPQ6IPU0 288 aa17.43■□□□□ 0.38
CKAP4-201ENST00000378026 FAM133AQ8N9E0 248 aa17.43■□□□□ 0.38
CKAP4-201ENST00000378026 FAXDC2Q96IV6 333 aa17.43■□□□□ 0.38
CKAP4-201ENST00000378026 NFS1Q9Y697 457 aa17.43■□□□□ 0.38
CKAP4-201ENST00000378026 GRID2IPA4D2P6 1211 aa17.42■□□□□ 0.38
CKAP4-201ENST00000378026 TXKP42681 527 aa17.42■□□□□ 0.38
CKAP4-201ENST00000378026 IFFO1Q0D2I5 559 aa17.42■□□□□ 0.38
CKAP4-201ENST00000378026 FAM83BQ5T0W9 1011 aa17.42■□□□□ 0.38
CKAP4-201ENST00000378026 LRCH2Q5VUJ6 765 aa17.42■□□□□ 0.38
CKAP4-201ENST00000378026 AMACRQ9UHK6 382 aa17.42■□□□□ 0.38
CKAP4-201ENST00000378026 GGA2Q9UJY4 613 aa17.42■□□□□ 0.38
CKAP4-201ENST00000378026 ZBTB1Q9Y2K1 713 aa17.42■□□□□ 0.38
CKAP4-201ENST00000378026 GOLGA8HP0CJ92 632 aa17.42■□□□□ 0.38
CKAP4-201ENST00000378026 RUFY4Q6ZNE9 571 aa17.42■□□□□ 0.38
CKAP4-201ENST00000378026 ZNF622Q969S3 477 aaKnown RBP eCLIP17.42■□□□□ 0.38
CKAP4-201ENST00000378026 LRRC45Q96CN5 670 aa17.42■□□□□ 0.38
CKAP4-201ENST00000378026 C7orf25Q9BPX7 421 aa17.42■□□□□ 0.38
CKAP4-201ENST00000378026 TBC1D7Q9P0N9 293 aa17.42■□□□□ 0.38
CKAP4-201ENST00000378026 BAZ2AQ9UIF9 1905 aaKnown RBP17.42■□□□□ 0.38
CKAP4-201ENST00000378026 A0A1B0GUA9 196 aa17.41■□□□□ 0.38
CKAP4-201ENST00000378026 SART1O43290 800 aaKnown RBP17.41■□□□□ 0.38
CKAP4-201ENST00000378026 BUB1BO60566 1050 aaPredicted RBP17.41■□□□□ 0.38
CKAP4-201ENST00000378026 STAMBPL1Q96FJ0 436 aa17.41■□□□□ 0.38
CKAP4-201ENST00000378026 CELF4Q9BZC1 486 aaKnown RBP17.41■□□□□ 0.38
CKAP4-201ENST00000378026 NOD2Q9HC29 1040 aa17.41■□□□□ 0.38
CKAP4-201ENST00000378026 GGT7Q9UJ14 662 aa17.41■□□□□ 0.38
CKAP4-201ENST00000378026 L3MBTL1Q9Y468 752 aa17.41■□□□□ 0.38
CKAP4-201ENST00000378026 MYMKA6NI61 221 aa17.41■□□□□ 0.38
CKAP4-201ENST00000378026 OR52Z1P0C646 297 aa17.41■□□□□ 0.38
CKAP4-201ENST00000378026 KIF5BP33176 963 aa17.41■□□□□ 0.38
CKAP4-201ENST00000378026 AMPD3Q01432 767 aa17.41■□□□□ 0.38
CKAP4-201ENST00000378026 MYO1EQ12965 1108 aa17.41■□□□□ 0.38
CKAP4-201ENST00000378026 TBC1D1Q86TI0 1168 aaPredicted RBP17.41■□□□□ 0.38
CKAP4-201ENST00000378026 CCDC50Q8IVM0 306 aa17.41■□□□□ 0.38
CKAP4-201ENST00000378026 TLDC2A0PJX2 215 aa17.41■□□□□ 0.38
CKAP4-201ENST00000378026 CTNND1O60716 968 aaKnown RBP17.41■□□□□ 0.38
CKAP4-201ENST00000378026 ITGA4P13612 1032 aa17.41■□□□□ 0.38
CKAP4-201ENST00000378026 ELF3P78545 371 aaPredicted RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms