RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 RHBDL3P58872 404 aa14.63□□□□□ -0.07
ACTN1-202ENST00000376839 UBE2SQ16763 222 aa14.63□□□□□ -0.07
ACTN1-202ENST00000376839 FAM98CQ17RN3 349 aaKnown RBP14.63□□□□□ -0.07
ACTN1-202ENST00000376839 KRT79Q5XKE5 535 aa14.63□□□□□ -0.07
ACTN1-202ENST00000376839 KANSL2Q9H9L4 492 aa14.63□□□□□ -0.07
ACTN1-202ENST00000376839 AHDC1Q5TGY3 1603 aaPredicted RBP14.63□□□□□ -0.07
ACTN1-202ENST00000376839 NOL4O94818 638 aa14.62□□□□□ -0.07
ACTN1-202ENST00000376839 SMARCA1P28370 1054 aa14.62□□□□□ -0.07
ACTN1-202ENST00000376839 DNA2P51530 1060 aa14.62□□□□□ -0.07
ACTN1-202ENST00000376839 ARHGEF1Q92888 912 aaKnown RBP14.62□□□□□ -0.07
ACTN1-202ENST00000376839 UIMC1Q96RL1 719 aa14.62□□□□□ -0.07
ACTN1-202ENST00000376839 RABEP2Q9H5N1 569 aa14.62□□□□□ -0.07
ACTN1-202ENST00000376839 ZNF831Q5JPB2 1677 aa14.62□□□□□ -0.07
ACTN1-202ENST00000376839 NAP1L1P55209 391 aaKnown RBP14.62□□□□□ -0.07
ACTN1-202ENST00000376839 COASYQ13057 564 aa14.62□□□□□ -0.07
ACTN1-202ENST00000376839 ZCWPW2Q504Y3 356 aa14.62□□□□□ -0.07
ACTN1-202ENST00000376839 DNAJC19Q96DA6 116 aa14.62□□□□□ -0.07
ACTN1-202ENST00000376839 NOX5Q96PH1 765 aa14.62□□□□□ -0.07
ACTN1-202ENST00000376839 TSG101Q99816 390 aa14.62□□□□□ -0.07
ACTN1-202ENST00000376839 SH3GL2Q99962 352 aa14.62□□□□□ -0.07
ACTN1-202ENST00000376839 TBC1D7Q9P0N9 293 aa14.62□□□□□ -0.07
ACTN1-202ENST00000376839 SSU72P8A0A1W2PR75 194 aa14.61□□□□□ -0.07
ACTN1-202ENST00000376839 PAFAH1B1P43034 410 aa14.61□□□□□ -0.07
ACTN1-202ENST00000376839 NOVP48745 357 aa14.61□□□□□ -0.07
ACTN1-202ENST00000376839 IRAK1P51617 712 aa14.61□□□□□ -0.07
ACTN1-202ENST00000376839 EPHB4P54760 987 aa14.61□□□□□ -0.07
ACTN1-202ENST00000376839 CORO7P57737 925 aa14.61□□□□□ -0.07
ACTN1-202ENST00000376839 GPSM2P81274 684 aa14.61□□□□□ -0.07
ACTN1-202ENST00000376839 C8orf74Q6P047 294 aa14.61□□□□□ -0.07
ACTN1-202ENST00000376839 MYOCDQ8IZQ8 938 aa14.61□□□□□ -0.07
ACTN1-202ENST00000376839 ARL8AQ96BM9 186 aa14.61□□□□□ -0.07
ACTN1-202ENST00000376839 CD209Q9NNX6 404 aa14.61□□□□□ -0.07
ACTN1-202ENST00000376839 GPCPD1Q9NPB8 672 aa14.61□□□□□ -0.07
ACTN1-202ENST00000376839 COL4A3BPQ9Y5P4 624 aa14.61□□□□□ -0.07
ACTN1-202ENST00000376839 ZSCAN5CA6NGD5 496 aaPredicted RBP14.61□□□□□ -0.07
ACTN1-202ENST00000376839 TRAF5O00463 557 aa14.61□□□□□ -0.07
ACTN1-202ENST00000376839 PDIA5Q14554 519 aa14.61□□□□□ -0.07
ACTN1-202ENST00000376839 RUBCNQ92622 972 aa14.61□□□□□ -0.07
ACTN1-202ENST00000376839 RIC8AQ9NPQ8 531 aa14.61□□□□□ -0.07
ACTN1-202ENST00000376839 PPP1R11O60927 126 aaPredicted RBP14.61□□□□□ -0.07
ACTN1-202ENST00000376839 MAGEA9P43362 315 aa14.61□□□□□ -0.07
ACTN1-202ENST00000376839 CCDC40Q4G0X9 1142 aa14.61□□□□□ -0.07
ACTN1-202ENST00000376839 TTMPQ5BVD1 217 aa14.61□□□□□ -0.07
ACTN1-202ENST00000376839 FAM83BQ5T0W9 1011 aa14.61□□□□□ -0.07
ACTN1-202ENST00000376839 RC3H1Q5TC82 1133 aaKnown RBP14.61□□□□□ -0.07
ACTN1-202ENST00000376839 TTC19Q6DKK2 380 aaPredicted RBP14.61□□□□□ -0.07
ACTN1-202ENST00000376839 HAS1Q92839 578 aa14.61□□□□□ -0.07
ACTN1-202ENST00000376839 LSM14BQ9BX40 385 aaKnown RBP14.61□□□□□ -0.07
ACTN1-202ENST00000376839 RAB34Q9BZG1 259 aa14.61□□□□□ -0.07
ACTN1-202ENST00000376839 RBAK-RBAKDNI3L0D1 243 aa14.6□□□□□ -0.07
ACTN1-202ENST00000376839 FTCDO95954 541 aa14.6□□□□□ -0.07
ACTN1-202ENST00000376839 SSBP05455 408 aaKnown RBP eCLIP14.6□□□□□ -0.07
ACTN1-202ENST00000376839 GLI1P08151 1106 aa14.6□□□□□ -0.07
ACTN1-202ENST00000376839 POLR2FP61218 127 aaKnown RBP14.6□□□□□ -0.07
ACTN1-202ENST00000376839 CACNB1Q02641 598 aaPredicted RBP14.6□□□□□ -0.07
ACTN1-202ENST00000376839 DNAJC21Q5F1R6 531 aaKnown RBP14.6□□□□□ -0.07
ACTN1-202ENST00000376839 EMBQ6PCB8 327 aa14.6□□□□□ -0.07
ACTN1-202ENST00000376839 NELFCDQ8IXH7 590 aa14.6□□□□□ -0.07
ACTN1-202ENST00000376839 CEP72Q9P209 647 aa14.6□□□□□ -0.07
ACTN1-202ENST00000376839 RTCBQ9Y3I0 505 aaKnown RBP14.6□□□□□ -0.07
ACTN1-202ENST00000376839 GRIN2DO15399 1336 aa14.6□□□□□ -0.07
ACTN1-202ENST00000376839 ESYT3A0FGR9 886 aa14.6□□□□□ -0.07
ACTN1-202ENST00000376839 PALMO75781 387 aa14.6□□□□□ -0.07
ACTN1-202ENST00000376839 UFL1O94874 794 aa14.6□□□□□ -0.07
ACTN1-202ENST00000376839 FKBP3Q00688 224 aaKnown RBP14.6□□□□□ -0.07
ACTN1-202ENST00000376839 PPFIA1Q13136 1202 aa14.6□□□□□ -0.07
ACTN1-202ENST00000376839 PSMD2Q13200 908 aa14.6□□□□□ -0.07
ACTN1-202ENST00000376839 FAM26FQ5R3K3 315 aa14.6□□□□□ -0.07
ACTN1-202ENST00000376839 PROM2Q8N271 834 aa14.6□□□□□ -0.07
ACTN1-202ENST00000376839 EDEM3Q9BZQ6 932 aa14.6□□□□□ -0.07
ACTN1-202ENST00000376839 MTMR4Q9NYA4 1195 aa14.6□□□□□ -0.07
ACTN1-202ENST00000376839 AKR1B1P15121 316 aa14.59□□□□□ -0.07
ACTN1-202ENST00000376839 CCT5P48643 541 aa14.59□□□□□ -0.07
ACTN1-202ENST00000376839 CARSP49589 748 aaKnown RBP14.59□□□□□ -0.07
ACTN1-202ENST00000376839 ARID5AQ03989 594 aa14.59□□□□□ -0.07
ACTN1-202ENST00000376839 ENOX2Q16206 610 aaKnown RBP14.59□□□□□ -0.07
ACTN1-202ENST00000376839 SLC9C1Q4G0N8 1177 aa14.59□□□□□ -0.07
ACTN1-202ENST00000376839 SFMBT2Q5VUG0 894 aa14.59□□□□□ -0.07
ACTN1-202ENST00000376839 RNF10Q8N5U6 811 aaKnown RBP14.59□□□□□ -0.07
ACTN1-202ENST00000376839 CAVIN3Q969G5 261 aa14.59□□□□□ -0.07
ACTN1-202ENST00000376839 CAPS2Q9BXY5 557 aa14.59□□□□□ -0.07
ACTN1-202ENST00000376839 PANK4Q9NVE7 773 aa14.59□□□□□ -0.07
ACTN1-202ENST00000376839 DDX25Q9UHL0 483 aaKnown RBP14.59□□□□□ -0.07
ACTN1-202ENST00000376839 PACSIN2Q9UNF0 486 aaPredicted RBP14.59□□□□□ -0.07
ACTN1-202ENST00000376839 NPHP3-ACAD11A0A0J9YXS1 232 aa14.59□□□□□ -0.07
ACTN1-202ENST00000376839 GOLGA8KD6RF30 607 aa14.59□□□□□ -0.07
ACTN1-202ENST00000376839 hCG_1984214I3L0E3 225 aa14.59□□□□□ -0.07
ACTN1-202ENST00000376839 SERPING1P05155 500 aa14.59□□□□□ -0.07
ACTN1-202ENST00000376839 FAM153BP0C7A2 387 aa14.59□□□□□ -0.07
ACTN1-202ENST00000376839 KLRC1P26715 233 aa14.59□□□□□ -0.07
ACTN1-202ENST00000376839 FAM153CQ494X1 144 aa14.59□□□□□ -0.07
ACTN1-202ENST00000376839 MFSD14BQ5SR56 506 aa14.59□□□□□ -0.07
ACTN1-202ENST00000376839 ZNF713Q8N859 430 aaPredicted RBP14.59□□□□□ -0.07
ACTN1-202ENST00000376839 TBC1D5Q92609 795 aa14.59□□□□□ -0.07
ACTN1-202ENST00000376839 PACSIN1Q9BY11 444 aa14.59□□□□□ -0.07
ACTN1-202ENST00000376839 FAM153AQ9UHL3 310 aa14.59□□□□□ -0.07
ACTN1-202ENST00000376839 NHSQ6T4R5 1651 aa14.58□□□□□ -0.07
ACTN1-202ENST00000376839 E9PMD0 336 aa14.58□□□□□ -0.08
ACTN1-202ENST00000376839 TNFRSF8P28908 595 aa14.58□□□□□ -0.08
ACTN1-202ENST00000376839 GNGT1P63211 74 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms