RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 OCMP0CE72 109 aaPredicted RBP13.47□□□□□ -0.25
VPS13A-204ENST00000376634 IFNAR2P48551 515 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 MESDQ14696 234 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 DPP9Q86TI2 863 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 CUEDC2Q9H467 287 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 FGFR1OP2Q9NVK5 253 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 FIS1Q9Y3D6 152 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 OCRLQ01968 901 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 FLOT2Q14254 428 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 MRFAP1L1Q96HT8 127 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 ATP7AQ04656 1500 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 ASXL2Q76L83 1435 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 TMCC1O94876 653 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 SKIP12755 728 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 ARHGEF6Q15052 776 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 C10orf76Q5T2E6 689 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 OTUD7BQ6GQQ9 843 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 MIS18BP1Q6P0N0 1132 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 GIPC2Q8TF65 315 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 YY1AP1Q9H869 796 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 INTUQ9ULD6 942 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 EXOC1LA0A1B0GW35 172 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 RPSAP08865 295 aaKnown RBP13.47□□□□□ -0.25
VPS13A-204ENST00000376634 ARL13BQ3SXY8 428 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 DARS2Q6PI48 645 aaKnown RBP13.47□□□□□ -0.25
VPS13A-204ENST00000376634 STK17AQ9UEE5 414 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 SYNMO15061 1565 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 SULF1Q8IWU6 871 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 MAGOHBQ96A72 148 aaKnown RBP13.47□□□□□ -0.25
VPS13A-204ENST00000376634 ZNF653Q96CK0 615 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 PAMP19021 973 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 SERPINI2O75830 405 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 LONP1P36776 959 aaKnown RBP13.47□□□□□ -0.25
VPS13A-204ENST00000376634 ARL4AP40617 200 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 Q3C1V9 767 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 NCLNQ969V3 563 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 NRBP2Q9NSY0 501 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 GAP43P17677 238 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 TRIM60Q495X7 471 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 SLC7A3Q8WY07 619 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 TUBB6Q9BUF5 446 aa13.47□□□□□ -0.25
VPS13A-204ENST00000376634 ECEL1O95672 775 aa13.46□□□□□ -0.25
VPS13A-204ENST00000376634 ST13P4Q8IZP2 240 aaPredicted RBP13.46□□□□□ -0.25
VPS13A-204ENST00000376634 SERTAD1Q9UHV2 236 aa13.46□□□□□ -0.25
VPS13A-204ENST00000376634 FNDC3AQ9Y2H6 1198 aaKnown RBP13.46□□□□□ -0.25
VPS13A-204ENST00000376634 QRICH2Q9H0J4 1663 aa13.46□□□□□ -0.25
VPS13A-204ENST00000376634 IFNA8P32881 189 aa13.46□□□□□ -0.25
VPS13A-204ENST00000376634 CCT5P48643 541 aa13.46□□□□□ -0.25
VPS13A-204ENST00000376634 CYP4F22Q6NT55 531 aa13.46□□□□□ -0.25
VPS13A-204ENST00000376634 GANCQ8TET4 914 aa13.46□□□□□ -0.25
VPS13A-204ENST00000376634 CNOT6LQ96LI5 555 aaKnown RBP13.46□□□□□ -0.25
VPS13A-204ENST00000376634 ZNF215Q9UL58 517 aaPredicted RBP13.46□□□□□ -0.25
VPS13A-204ENST00000376634 H2AFZP0C0S5 128 aa13.46□□□□□ -0.25
VPS13A-204ENST00000376634 CCND2P30279 289 aa13.46□□□□□ -0.25
VPS13A-204ENST00000376634 H2AFVQ71UI9 128 aa13.46□□□□□ -0.25
VPS13A-204ENST00000376634 SIX6OS1Q8N1H7 587 aa13.46□□□□□ -0.25
VPS13A-204ENST00000376634 PNMA1Q8ND90 353 aa13.46□□□□□ -0.25
VPS13A-204ENST00000376634 ABCC10Q5T3U5 1492 aa13.46□□□□□ -0.25
VPS13A-204ENST00000376634 MLH3Q9UHC1 1453 aa13.46□□□□□ -0.25
VPS13A-204ENST00000376634 PPP1R12AO14974 1030 aaPredicted RBP13.46□□□□□ -0.25
VPS13A-204ENST00000376634 KIF19Q2TAC6 998 aa13.46□□□□□ -0.25
VPS13A-204ENST00000376634 TTLL7Q6ZT98 887 aa13.46□□□□□ -0.25
VPS13A-204ENST00000376634 ARMC9Q7Z3E5 817 aa13.46□□□□□ -0.25
VPS13A-204ENST00000376634 SYMPKQ92797 1274 aaKnown RBP13.46□□□□□ -0.25
VPS13A-204ENST00000376634 JPH2Q9BR39 696 aaPredicted RBP13.46□□□□□ -0.25
VPS13A-204ENST00000376634 KIAA1024Q9UPX6 916 aa13.46□□□□□ -0.25
VPS13A-204ENST00000376634 PCDHA1Q9Y5I3 950 aa13.46□□□□□ -0.25
VPS13A-204ENST00000376634 SYCE1LA8MT33 242 aa13.46□□□□□ -0.25
VPS13A-204ENST00000376634 NAA35Q5VZE5 725 aa13.46□□□□□ -0.25
VPS13A-204ENST00000376634 DNAJC24Q6P3W2 148 aa13.46□□□□□ -0.25
VPS13A-204ENST00000376634 PGRMC1O00264 195 aaKnown RBP13.46□□□□□ -0.25
VPS13A-204ENST00000376634 LRRN2O75325 713 aa13.46□□□□□ -0.25
VPS13A-204ENST00000376634 MCF2P10911 925 aa13.46□□□□□ -0.25
VPS13A-204ENST00000376634 TRIM67Q6ZTA4 783 aa13.46□□□□□ -0.25
VPS13A-204ENST00000376634 PHACTR3Q96KR7 559 aa13.46□□□□□ -0.25
VPS13A-204ENST00000376634 GCP02774 474 aa13.46□□□□□ -0.26
VPS13A-204ENST00000376634 NCF2P19878 526 aaPredicted RBP13.46□□□□□ -0.26
VPS13A-204ENST00000376634 CIITAP33076 1130 aa13.46□□□□□ -0.26
VPS13A-204ENST00000376634 CCNA1P78396 465 aa13.46□□□□□ -0.26
VPS13A-204ENST00000376634 ZBTB41Q5SVQ8 909 aa13.46□□□□□ -0.26
VPS13A-204ENST00000376634 PDXDC1Q6P996 788 aa13.46□□□□□ -0.26
VPS13A-204ENST00000376634 RNF207Q6ZRF8 634 aa13.46□□□□□ -0.26
VPS13A-204ENST00000376634 ZBTB18Q99592 522 aa13.46□□□□□ -0.26
VPS13A-204ENST00000376634 HAUS4Q9H6D7 363 aa13.46□□□□□ -0.26
VPS13A-204ENST00000376634 THRAP3Q9Y2W1 955 aaKnown RBP13.46□□□□□ -0.26
VPS13A-204ENST00000376634 NDUFB9Q9Y6M9 179 aa13.46□□□□□ -0.26
VPS13A-204ENST00000376634 KRT1P04264 644 aa13.46□□□□□ -0.26
VPS13A-204ENST00000376634 HSPA6P17066 643 aa13.46□□□□□ -0.26
VPS13A-204ENST00000376634 PLA2G4DQ86XP0 818 aa13.46□□□□□ -0.26
VPS13A-204ENST00000376634 GTPBP10A4D1E9 387 aaKnown RBP13.45□□□□□ -0.26
VPS13A-204ENST00000376634 PRPSAP2O60256 369 aa13.45□□□□□ -0.26
VPS13A-204ENST00000376634 EFCAB14O75071 495 aa13.45□□□□□ -0.26
VPS13A-204ENST00000376634 NR2F2P24468 414 aa13.45□□□□□ -0.26
VPS13A-204ENST00000376634 TFAMQ00059 246 aaKnown RBP13.45□□□□□ -0.26
VPS13A-204ENST00000376634 LRRC8AQ8IWT6 810 aa13.45□□□□□ -0.26
VPS13A-204ENST00000376634 RABGGTAQ92696 567 aa13.45□□□□□ -0.26
VPS13A-204ENST00000376634 AP5M1Q9H0R1 490 aa13.45□□□□□ -0.26
VPS13A-204ENST00000376634 MAGED2Q9UNF1 606 aaPredicted RBP13.45□□□□□ -0.26
VPS13A-204ENST00000376634 EPN1Q9Y6I3 576 aaPredicted RBP13.45□□□□□ -0.26
VPS13A-204ENST00000376634 ABCB5Q2M3G0 1257 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms