RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 CCPG1Q9ULG6 757 aa12.89□□□□□ -0.35
DDR1-227ENST00000376570 PNMA6FA0A0J9YX94 578 aa12.89□□□□□ -0.35
DDR1-227ENST00000376570 EIF3JO75822 258 aaKnown RBP12.89□□□□□ -0.35
DDR1-227ENST00000376570 ATP1A1P05023 1023 aaKnown RBP12.89□□□□□ -0.35
DDR1-227ENST00000376570 NPR1P16066 1061 aa12.89□□□□□ -0.35
DDR1-227ENST00000376570 HPDP32754 393 aaPredicted RBP12.89□□□□□ -0.35
DDR1-227ENST00000376570 DNM2P50570 870 aa12.89□□□□□ -0.35
DDR1-227ENST00000376570 SLC35G1Q2M3R5 365 aa12.89□□□□□ -0.35
DDR1-227ENST00000376570 LRCH2Q5VUJ6 765 aa12.89□□□□□ -0.35
DDR1-227ENST00000376570 CCDC25Q86WR0 208 aa12.89□□□□□ -0.35
DDR1-227ENST00000376570 NOA1Q8NC60 698 aaKnown RBP12.89□□□□□ -0.35
DDR1-227ENST00000376570 ABCB11O95342 1321 aa12.88□□□□□ -0.35
DDR1-227ENST00000376570 PPP1R12BO60237 982 aaPredicted RBP12.88□□□□□ -0.35
DDR1-227ENST00000376570 DLATP10515 647 aaKnown RBP12.88□□□□□ -0.35
DDR1-227ENST00000376570 KRT13P13646 458 aa12.88□□□□□ -0.35
DDR1-227ENST00000376570 CCNE1P24864 410 aa12.88□□□□□ -0.35
DDR1-227ENST00000376570 NMT1P30419 496 aaKnown RBP12.88□□□□□ -0.35
DDR1-227ENST00000376570 FUT2Q10981 343 aa12.88□□□□□ -0.35
DDR1-227ENST00000376570 ARHGEF10LQ9HCE6 1279 aa12.88□□□□□ -0.35
DDR1-227ENST00000376570 SAR1BQ9Y6B6 198 aa12.88□□□□□ -0.35
DDR1-227ENST00000376570 GPR75-ASB3A0A0A6YYF3 556 aa12.88□□□□□ -0.35
DDR1-227ENST00000376570 ZBTB5O15062 677 aa12.88□□□□□ -0.35
DDR1-227ENST00000376570 VPS41P49754 854 aa12.88□□□□□ -0.35
DDR1-227ENST00000376570 ARHGAP4P98171 946 aa12.88□□□□□ -0.35
DDR1-227ENST00000376570 ODR4Q5SWX8 454 aa12.88□□□□□ -0.35
DDR1-227ENST00000376570 ZNF746Q6NUN9 644 aaPredicted RBP12.88□□□□□ -0.35
DDR1-227ENST00000376570 NFRKBQ6P4R8 1299 aa12.88□□□□□ -0.35
DDR1-227ENST00000376570 MS4A14Q96JA4 679 aa12.88□□□□□ -0.35
DDR1-227ENST00000376570 PURBQ96QR8 312 aaKnown RBP12.88□□□□□ -0.35
DDR1-227ENST00000376570 CNTNAP4Q9C0A0 1308 aa12.88□□□□□ -0.35
DDR1-227ENST00000376570 GFPT2O94808 682 aa12.88□□□□□ -0.35
DDR1-227ENST00000376570 NIM1KQ8IY84 436 aa12.88□□□□□ -0.35
DDR1-227ENST00000376570 ZNF579Q8NAF0 562 aaKnown RBP12.88□□□□□ -0.35
DDR1-227ENST00000376570 MASTLQ96GX5 879 aa12.88□□□□□ -0.35
DDR1-227ENST00000376570 ABCB6Q9NP58 842 aa12.88□□□□□ -0.35
DDR1-227ENST00000376570 EMILIN3Q9NT22 766 aa12.88□□□□□ -0.35
DDR1-227ENST00000376570 CACNA1FO60840 1977 aa12.87□□□□□ -0.35
DDR1-227ENST00000376570 SHTN1A0MZ66 631 aa12.87□□□□□ -0.35
DDR1-227ENST00000376570 TRAPPC10P48553 1259 aa12.87□□□□□ -0.35
DDR1-227ENST00000376570 ATP1A2P50993 1020 aa12.87□□□□□ -0.35
DDR1-227ENST00000376570 IRX5P78411 483 aaPredicted RBP12.87□□□□□ -0.35
DDR1-227ENST00000376570 ZNF543Q08ER8 600 aa12.87□□□□□ -0.35
DDR1-227ENST00000376570 ASPRV1Q53RT3 343 aa12.87□□□□□ -0.35
DDR1-227ENST00000376570 SLC10A5Q5PT55 438 aa12.87□□□□□ -0.35
DDR1-227ENST00000376570 TMED8Q6PL24 325 aaPredicted RBP12.87□□□□□ -0.35
DDR1-227ENST00000376570 NYAP1Q6ZVC0 841 aa12.87□□□□□ -0.35
DDR1-227ENST00000376570 C16orf86Q6ZW13 317 aa12.87□□□□□ -0.35
DDR1-227ENST00000376570 HS2ST1Q7LGA3 356 aa12.87□□□□□ -0.35
DDR1-227ENST00000376570 SAMD7Q7Z3H4 446 aa12.87□□□□□ -0.35
DDR1-227ENST00000376570 LZTS2Q9BRK4 669 aa12.87□□□□□ -0.35
DDR1-227ENST00000376570 LACRTQ9GZZ8 138 aa12.87□□□□□ -0.35
DDR1-227ENST00000376570 TSPYL1Q9H0U9 437 aa12.87□□□□□ -0.35
DDR1-227ENST00000376570 HSD3B7Q9H2F3 369 aa12.87□□□□□ -0.35
DDR1-227ENST00000376570 ANAPC4Q9UJX5 808 aa12.87□□□□□ -0.35
DDR1-227ENST00000376570 KCPQ6ZWJ8 1503 aa12.87□□□□□ -0.35
DDR1-227ENST00000376570 FAM102BQ5T8I3 360 aa12.87□□□□□ -0.35
DDR1-227ENST00000376570 SYDE2Q5VT97 1194 aa12.87□□□□□ -0.35
DDR1-227ENST00000376570 SCLT1Q96NL6 688 aa12.87□□□□□ -0.35
DDR1-227ENST00000376570 GLIS2Q9BZE0 524 aaPredicted RBP12.87□□□□□ -0.35
DDR1-227ENST00000376570 ATP6V0A2Q9Y487 856 aa12.87□□□□□ -0.35
DDR1-227ENST00000376570 COL1A1P02452 1464 aaPredicted RBP12.87□□□□□ -0.35
DDR1-227ENST00000376570 A0A1B0GTH6 734 aa12.87□□□□□ -0.35
DDR1-227ENST00000376570 PEX10O60683 326 aa12.87□□□□□ -0.35
DDR1-227ENST00000376570 MDM2Q00987 491 aaPredicted RBP12.87□□□□□ -0.35
DDR1-227ENST00000376570 COASYQ13057 564 aa12.87□□□□□ -0.35
DDR1-227ENST00000376570 CEP112Q8N8E3 955 aa12.87□□□□□ -0.35
DDR1-227ENST00000376570 ARMCX3Q9UH62 379 aaPredicted RBP12.87□□□□□ -0.35
DDR1-227ENST00000376570 MORC2Q9Y6X9 1032 aaPredicted RBP12.87□□□□□ -0.35
DDR1-227ENST00000376570 ADAMTSL3P82987 1691 aa12.86□□□□□ -0.35
DDR1-227ENST00000376570 PALM3A6NDB9 673 aaPredicted RBP12.86□□□□□ -0.35
DDR1-227ENST00000376570 KCNK3O14649 394 aa12.86□□□□□ -0.35
DDR1-227ENST00000376570 KRT5P13647 590 aa12.86□□□□□ -0.35
DDR1-227ENST00000376570 RXRBP28702 533 aa12.86□□□□□ -0.35
DDR1-227ENST00000376570 TNIP1Q15025 636 aa12.86□□□□□ -0.35
DDR1-227ENST00000376570 LONRF2Q1L5Z9 754 aa12.86□□□□□ -0.35
DDR1-227ENST00000376570 SFMBT2Q5VUG0 894 aa12.86□□□□□ -0.35
DDR1-227ENST00000376570 LMBRD2Q68DH5 695 aaPredicted RBP12.86□□□□□ -0.35
DDR1-227ENST00000376570 TXLNBQ8N3L3 684 aa12.86□□□□□ -0.35
DDR1-227ENST00000376570 TRIM66O15016 1216 aa12.86□□□□□ -0.35
DDR1-227ENST00000376570 RHBDL3P58872 404 aa12.86□□□□□ -0.35
DDR1-227ENST00000376570 SBK1Q52WX2 424 aa12.86□□□□□ -0.35
DDR1-227ENST00000376570 PDXDC2PQ6P474 469 aa12.86□□□□□ -0.35
DDR1-227ENST00000376570 DLK2Q6UY11 383 aa12.86□□□□□ -0.35
DDR1-227ENST00000376570 ADSSL1Q8N142 457 aa12.86□□□□□ -0.35
DDR1-227ENST00000376570 DYDC2Q96IM9 177 aa12.86□□□□□ -0.35
DDR1-227ENST00000376570 AP1M1Q9BXS5 423 aa12.86□□□□□ -0.35
DDR1-227ENST00000376570 DPH5Q9H2P9 285 aa12.86□□□□□ -0.35
DDR1-227ENST00000376570 CDC23Q9UJX2 597 aa12.86□□□□□ -0.35
DDR1-227ENST00000376570 RABGAP1Q9Y3P9 1069 aa12.86□□□□□ -0.35
DDR1-227ENST00000376570 TAF1P21675 1872 aa12.86□□□□□ -0.35
DDR1-227ENST00000376570 N4BP1O75113 896 aaKnown RBP12.86□□□□□ -0.35
DDR1-227ENST00000376570 KCNA1Q09470 495 aa12.86□□□□□ -0.35
DDR1-227ENST00000376570 ASIC2Q16515 512 aa12.86□□□□□ -0.35
DDR1-227ENST00000376570 CC2D2BQ6DHV5 1058 aa12.86□□□□□ -0.35
DDR1-227ENST00000376570 FAM178BQ8IXR5 827 aa12.86□□□□□ -0.35
DDR1-227ENST00000376570 FGFBP2Q9BYJ0 223 aa12.86□□□□□ -0.35
DDR1-227ENST00000376570 ACBD3Q9H3P7 528 aa12.86□□□□□ -0.35
DDR1-227ENST00000376570 POLRMTO00411 1230 aaKnown RBP12.85□□□□□ -0.35
DDR1-227ENST00000376570 RC3H1Q5TC82 1133 aaKnown RBP12.85□□□□□ -0.35
DDR1-227ENST00000376570 AKT1S1Q96B36 256 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms