RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 TCP10L2B9ZVM9 353 aa15.54■□□□□ 0.08
MSH5-202ENST00000375740 IDEP14735 1019 aa15.54■□□□□ 0.08
MSH5-202ENST00000375740 DNM2P50570 870 aa15.54■□□□□ 0.08
MSH5-202ENST00000375740 IKQ13123 557 aaPredicted RBP15.54■□□□□ 0.08
MSH5-202ENST00000375740 CENPPQ6IPU0 288 aa15.54■□□□□ 0.08
MSH5-202ENST00000375740 DDX12PQ92771 950 aa15.54■□□□□ 0.08
MSH5-202ENST00000375740 CNOT6LQ96LI5 555 aaKnown RBP15.54■□□□□ 0.08
MSH5-202ENST00000375740 AMNQ9BXJ7 453 aa15.54■□□□□ 0.08
MSH5-202ENST00000375740 PDGFDQ9GZP0 370 aaPredicted RBP15.54■□□□□ 0.08
MSH5-202ENST00000375740 PLEKHA4Q9H4M7 779 aa15.54■□□□□ 0.08
MSH5-202ENST00000375740 A0A1W2PRG0 241 aa15.54■□□□□ 0.08
MSH5-202ENST00000375740 MAP2K7O14733 419 aa15.54■□□□□ 0.08
MSH5-202ENST00000375740 CYP26C1Q6V0L0 522 aa15.54■□□□□ 0.08
MSH5-202ENST00000375740 P2RX7Q99572 595 aaKnown RBP15.54■□□□□ 0.08
MSH5-202ENST00000375740 LRRC27Q9C0I9 530 aa15.54■□□□□ 0.08
MSH5-202ENST00000375740 BMP3P12645 472 aa15.53■□□□□ 0.08
MSH5-202ENST00000375740 USH1GQ495M9 461 aa15.53■□□□□ 0.08
MSH5-202ENST00000375740 SYDE2Q5VT97 1194 aa15.53■□□□□ 0.08
MSH5-202ENST00000375740 FBXO11Q86XK2 927 aa15.53■□□□□ 0.08
MSH5-202ENST00000375740 FAM114A1Q8IWE2 563 aa15.53■□□□□ 0.08
MSH5-202ENST00000375740 ACRBPQ8NEB7 543 aa15.53■□□□□ 0.08
MSH5-202ENST00000375740 KIFC2Q96AC6 838 aa15.53■□□□□ 0.08
MSH5-202ENST00000375740 CHP1Q99653 195 aa15.53■□□□□ 0.08
MSH5-202ENST00000375740 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.53■□□□□ 0.08
MSH5-202ENST00000375740 RGPD3A6NKT7 1758 aaPredicted RBP15.53■□□□□ 0.08
MSH5-202ENST00000375740 RGPD4Q7Z3J3 1758 aa15.53■□□□□ 0.08
MSH5-202ENST00000375740 RAD17O75943 681 aa15.53■□□□□ 0.08
MSH5-202ENST00000375740 MTIF2P46199 727 aaKnown RBP15.53■□□□□ 0.08
MSH5-202ENST00000375740 DRC1Q96MC2 740 aa15.53■□□□□ 0.08
MSH5-202ENST00000375740 CYP3A7-CYP3A51PA0A087WV96 503 aa15.52■□□□□ 0.08
MSH5-202ENST00000375740 CLRN2A0PK11 232 aa15.52■□□□□ 0.08
MSH5-202ENST00000375740 NKRFO15226 690 aaKnown RBP eCLIP15.52■□□□□ 0.08
MSH5-202ENST00000375740 TFRCP02786 760 aaKnown RBP15.52■□□□□ 0.08
MSH5-202ENST00000375740 CYP3A7P24462 503 aa15.52■□□□□ 0.08
MSH5-202ENST00000375740 TBC1D8BQ0IIM8 1120 aa15.52■□□□□ 0.08
MSH5-202ENST00000375740 OR8K1Q8NGG5 319 aa15.52■□□□□ 0.08
MSH5-202ENST00000375740 YY1AP1Q9H869 796 aa15.52■□□□□ 0.08
MSH5-202ENST00000375740 KCNMB3Q9NPA1 279 aa15.52■□□□□ 0.08
MSH5-202ENST00000375740 CAPN11Q9UMQ6 739 aa15.52■□□□□ 0.08
MSH5-202ENST00000375740 LUC7L2Q9Y383 392 aaKnown RBP15.52■□□□□ 0.08
MSH5-202ENST00000375740 JRKLQ9Y4A0 524 aa15.52■□□□□ 0.08
MSH5-202ENST00000375740 EIF3CLB5ME19 914 aaKnown RBP15.52■□□□□ 0.07
MSH5-202ENST00000375740 TAL1P17542 331 aaPredicted RBP15.52■□□□□ 0.07
MSH5-202ENST00000375740 AP3B2Q13367 1082 aa15.52■□□□□ 0.07
MSH5-202ENST00000375740 RSBN1LQ6PCB5 846 aaPredicted RBP15.52■□□□□ 0.07
MSH5-202ENST00000375740 SPICE1Q8N0Z3 855 aa15.52■□□□□ 0.07
MSH5-202ENST00000375740 RABGGTAQ92696 567 aa15.52■□□□□ 0.07
MSH5-202ENST00000375740 MBOAT7Q96N66 472 aa15.52■□□□□ 0.07
MSH5-202ENST00000375740 EIF3CQ99613 913 aaKnown RBP15.52■□□□□ 0.07
MSH5-202ENST00000375740 NOC4LQ9BVI4 516 aaKnown RBP15.52■□□□□ 0.07
MSH5-202ENST00000375740 KIAA1024Q9UPX6 916 aa15.52■□□□□ 0.07
MSH5-202ENST00000375740 FAN1Q9Y2M0 1017 aa15.52■□□□□ 0.07
MSH5-202ENST00000375740 SPDYE2BA6NHP3 402 aa15.51■□□□□ 0.07
MSH5-202ENST00000375740 RASSF10A6NK89 507 aa15.51■□□□□ 0.07
MSH5-202ENST00000375740 E9PMD0 336 aa15.51■□□□□ 0.07
MSH5-202ENST00000375740 PHACTR2O75167 634 aa15.51■□□□□ 0.07
MSH5-202ENST00000375740 SPDYE6P0CI01 402 aa15.51■□□□□ 0.07
MSH5-202ENST00000375740 ARHGAP4P98171 946 aa15.51■□□□□ 0.07
MSH5-202ENST00000375740 EHHADHQ08426 723 aa15.51■□□□□ 0.07
MSH5-202ENST00000375740 LRRC41Q15345 812 aa15.51■□□□□ 0.07
MSH5-202ENST00000375740 MIIPQ5JXC2 388 aa15.51■□□□□ 0.07
MSH5-202ENST00000375740 HYIQ5T013 277 aa15.51■□□□□ 0.07
MSH5-202ENST00000375740 GUF1Q8N442 669 aaKnown RBP15.51■□□□□ 0.07
MSH5-202ENST00000375740 TTLL6Q8N841 843 aa15.51■□□□□ 0.07
MSH5-202ENST00000375740 CRYGNQ8WXF5 182 aa15.51■□□□□ 0.07
MSH5-202ENST00000375740 DNAJC19Q96DA6 116 aa15.51■□□□□ 0.07
MSH5-202ENST00000375740 TMOD2Q9NZR1 351 aa15.51■□□□□ 0.07
MSH5-202ENST00000375740 ABL1P00519 1130 aa15.51■□□□□ 0.07
MSH5-202ENST00000375740 SSBP05455 408 aaKnown RBP eCLIP15.51■□□□□ 0.07
MSH5-202ENST00000375740 KLK7P49862 253 aa15.51■□□□□ 0.07
MSH5-202ENST00000375740 PSMD2Q13200 908 aa15.51■□□□□ 0.07
MSH5-202ENST00000375740 BTNL9Q6UXG8 535 aa15.51■□□□□ 0.07
MSH5-202ENST00000375740 LEKR1Q6ZMV7 388 aa15.51■□□□□ 0.07
MSH5-202ENST00000375740 GLIS3Q8NEA6 775 aa15.51■□□□□ 0.07
MSH5-202ENST00000375740 SLF1Q9BQI6 1058 aa15.51■□□□□ 0.07
MSH5-202ENST00000375740 NT5C3AQ9H0P0 336 aa15.51■□□□□ 0.07
MSH5-202ENST00000375740 GEMIN8Q9NWZ8 242 aaKnown RBP15.51■□□□□ 0.07
MSH5-202ENST00000375740 ZNF70Q9UC06 446 aaPredicted RBP15.51■□□□□ 0.07
MSH5-202ENST00000375740 PUF60Q9UHX1 559 aaKnown RBP15.51■□□□□ 0.07
MSH5-202ENST00000375740 PSMD14O00487 310 aa15.51■□□□□ 0.07
MSH5-202ENST00000375740 STAT3P40763 770 aa15.51■□□□□ 0.07
MSH5-202ENST00000375740 ECE1P42892 770 aa15.51■□□□□ 0.07
MSH5-202ENST00000375740 DLGAP5Q15398 846 aa15.51■□□□□ 0.07
MSH5-202ENST00000375740 BEND6Q5SZJ8 279 aaPredicted RBP15.51■□□□□ 0.07
MSH5-202ENST00000375740 PNKPQ96T60 521 aa15.51■□□□□ 0.07
MSH5-202ENST00000375740 DNAJC7Q99615 494 aa15.51■□□□□ 0.07
MSH5-202ENST00000375740 HERC5Q9UII4 1024 aaKnown RBP15.51■□□□□ 0.07
MSH5-202ENST00000375740 ZBTB12Q9Y330 459 aaPredicted RBP15.51■□□□□ 0.07
MSH5-202ENST00000375740 KDM3AQ9Y4C1 1321 aa15.5■□□□□ 0.07
MSH5-202ENST00000375740 KIF5CO60282 957 aa15.5■□□□□ 0.07
MSH5-202ENST00000375740 VIL1P09327 827 aaKnown RBP15.5■□□□□ 0.07
MSH5-202ENST00000375740 SKIDA1Q1XH10 827 aa15.5■□□□□ 0.07
MSH5-202ENST00000375740 PRR16Q569H4 304 aa15.5■□□□□ 0.07
MSH5-202ENST00000375740 LARGE2Q8N3Y3 721 aa15.5■□□□□ 0.07
MSH5-202ENST00000375740 ANKZF1Q9H8Y5 726 aa15.5■□□□□ 0.07
MSH5-202ENST00000375740 ZNF277Q9NRM2 450 aaPredicted RBP15.5■□□□□ 0.07
MSH5-202ENST00000375740 AGPAT5Q9NUQ2 364 aa15.5■□□□□ 0.07
MSH5-202ENST00000375740 PRR12Q9ULL5 1215 aa15.5■□□□□ 0.07
MSH5-202ENST00000375740 COL2A1P02458 1487 aaPredicted RBP15.5■□□□□ 0.07
MSH5-202ENST00000375740 POTEB3A0JP26 581 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms