RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 CCDC166P0CW27 439 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 C6orf50Q9HD87 102 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 RHBDL2Q9NX52 303 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 MATN2O00339 956 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 H2AFZP0C0S5 128 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 KPNA2P52292 529 aaKnown RBP7.14□□□□□ -1.27
UBR4-204ENST00000375254 MTTPP55157 894 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 TCHHL1Q5QJ38 904 aaPredicted RBP7.14□□□□□ -1.27
UBR4-204ENST00000375254 H2AFVQ71UI9 128 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 HFM1A2PYH4 1435 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 SMIM31A0A1B0GVY4 71 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 KLHL41O60662 606 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 CUL4AQ13619 759 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 LAMC2Q13753 1193 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 PPP4R4Q6NUP7 873 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 SMCR8Q8TEV9 937 aaPredicted RBP7.14□□□□□ -1.27
UBR4-204ENST00000375254 VPS16Q9H269 839 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 ZC3H11AO75152 810 aaKnown RBP eCLIP7.14□□□□□ -1.272e-9■■□□□ 12.3
UBR4-204ENST00000375254 MORF4L2Q15014 288 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 LRRC8EQ6NSJ5 796 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 PIGOQ8TEQ8 1089 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 ANAPC5Q9UJX4 755 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 AGTP01019 485 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 GARSP41250 739 aaKnown RBP7.14□□□□□ -1.27
UBR4-204ENST00000375254 SERPINH1P50454 418 aaKnown RBP7.14□□□□□ -1.27
UBR4-204ENST00000375254 PPP6R3Q5H9R7 873 aaPredicted RBP7.14□□□□□ -1.27
UBR4-204ENST00000375254 PEX5LQ8IYB4 626 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 OMA1Q96E52 524 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 DCDC2Q9UHG0 476 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 EFCAB14O75071 495 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 KLF18A0A0U1RQI7 1052 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 DDIT3P35638 169 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 GRPEL2Q8TAA5 225 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 NSL1Q96IY1 281 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 SEC16BQ96JE7 1060 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 B3GALT6Q96L58 329 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 KCNK16Q96T55 309 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.14□□□□□ -1.27
UBR4-204ENST00000375254 KANSL1LA0AUZ9 987 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 GADD45BO75293 160 aaPredicted RBP7.13□□□□□ -1.27
UBR4-204ENST00000375254 PAX7P23759 505 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 PGM1P36871 562 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 COPS2P61201 443 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 ADCK1Q86TW2 530 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 TRIM11Q96F44 468 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 ZBTB22O15209 634 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 ATP5BP06576 529 aaKnown RBP7.13□□□□□ -1.27
UBR4-204ENST00000375254 H2AFXP16104 143 aaPredicted RBP7.13□□□□□ -1.27
UBR4-204ENST00000375254 ZNF12P17014 697 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 GPTP24298 496 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 TRPC4APQ8TEL6 797 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 HMOX1P09601 288 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 MAGOHP61326 146 aaKnown RBP7.13□□□□□ -1.27
UBR4-204ENST00000375254 SKAP1Q86WV1 359 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 TRIM31Q9BZY9 425 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 EXOC7Q9UPT5 735 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 HSPA1AP0DMV8 641 aaKnown RBP7.13□□□□□ -1.27
UBR4-204ENST00000375254 HSPA1BP0DMV9 641 aaKnown RBP7.13□□□□□ -1.27
UBR4-204ENST00000375254 USP14P54578 494 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 ARMC3Q5W041 872 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 KIAA0825Q8IV33 1275 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 VSTM4Q8IW00 320 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 RHPN1Q8TCX5 695 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 CAVIN4Q5BKX8 364 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 FAM167BQ9BTA0 163 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 TLK1Q9UKI8 766 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 A8MXQ7 604 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 AASDHQ4L235 1098 aaPredicted RBP7.13□□□□□ -1.27
UBR4-204ENST00000375254 FBXL5Q9UKA1 691 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 SCAF8Q9UPN6 1271 aaKnown RBP7.13□□□□□ -1.27
UBR4-204ENST00000375254 TMCO4Q5TGY1 634 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 SYDE1Q6ZW31 735 aaPredicted RBP7.13□□□□□ -1.27
UBR4-204ENST00000375254 STK17AQ9UEE5 414 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 KCNJ18B7U540 433 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 KCNJ12Q14500 433 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 CADPS2Q86UW7 1296 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 ZNF473Q8WTR7 871 aaKnown RBP7.13□□□□□ -1.27
UBR4-204ENST00000375254 FAM8A1Q9UBU6 413 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 ECEL1O95672 775 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 BEND6Q5SZJ8 279 aaPredicted RBP7.13□□□□□ -1.27
UBR4-204ENST00000375254 TRMT10CQ7L0Y3 403 aaKnown RBP7.13□□□□□ -1.27
UBR4-204ENST00000375254 MLPHQ9BV36 600 aaPredicted RBP7.13□□□□□ -1.27
UBR4-204ENST00000375254 ASAP2O43150 1006 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 PRDM1O75626 825 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 IDH1O75874 414 aaKnown RBP7.13□□□□□ -1.27
UBR4-204ENST00000375254 B3GNT6Q6ZMB0 384 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 FAM153AQ9UHL3 310 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 IPPQ9Y573 584 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 DNAJC6O75061 913 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 GGPS1O95749 300 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 DSG1Q02413 1049 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 PLA2G4DQ86XP0 818 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 RAB20Q9NX57 234 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 MORC3Q14149 939 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 LRRC36Q1X8D7 754 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 IRGCQ6NXR0 463 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 TSPAN18Q96SJ8 248 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 ANKFY1Q9P2R3 1169 aa7.13□□□□□ -1.27
UBR4-204ENST00000375254 SMARCA5O60264 1052 aaPredicted RBP7.12□□□□□ -1.27
UBR4-204ENST00000375254 N4BP1O75113 896 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms