RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 KCNH2Q12809 1159 aa10.01□□□□□ -0.81
UBR4-201ENST00000375218 GRM3Q14832 879 aa10.01□□□□□ -0.81
UBR4-201ENST00000375218 KBTBD12Q3ZCT8 623 aa10.01□□□□□ -0.81
UBR4-201ENST00000375218 PLBD1Q6P4A8 553 aa10.01□□□□□ -0.81
UBR4-201ENST00000375218 L3MBTL3Q96JM7 780 aaPredicted RBP10.01□□□□□ -0.81
UBR4-201ENST00000375218 TRPV5Q9NQA5 729 aa10.01□□□□□ -0.81
UBR4-201ENST00000375218 PPP4R2Q9NY27 417 aa10.01□□□□□ -0.81
UBR4-201ENST00000375218 PCDHGB5Q9Y5G0 923 aa10.01□□□□□ -0.81
UBR4-201ENST00000375218 SFI1A8K8P3 1242 aa10□□□□□ -0.81
UBR4-201ENST00000375218 TOP1P11387 765 aaKnown RBP10□□□□□ -0.81
UBR4-201ENST00000375218 SKIP12755 728 aa10□□□□□ -0.81
UBR4-201ENST00000375218 ELF2Q15723 593 aa10□□□□□ -0.81
UBR4-201ENST00000375218 RAPH1Q70E73 1250 aa10□□□□□ -0.81
UBR4-201ENST00000375218 TAOK1Q7L7X3 1001 aa10□□□□□ -0.81
UBR4-201ENST00000375218 CELF2-AS1Q8N7Q2 184 aa10□□□□□ -0.81
UBR4-201ENST00000375218 CTNNBL1Q8WYA6 563 aaPredicted RBP10□□□□□ -0.81
UBR4-201ENST00000375218 CLP1Q92989 425 aaKnown RBP10□□□□□ -0.81
UBR4-201ENST00000375218 DDX20Q9UHI6 824 aaKnown RBP10□□□□□ -0.81
UBR4-201ENST00000375218 ANKRD36CQ5JPF3 1778 aa10□□□□□ -0.81
UBR4-201ENST00000375218 NMT2O60551 498 aa10□□□□□ -0.81
UBR4-201ENST00000375218 LIMK1P53667 647 aa10□□□□□ -0.81
UBR4-201ENST00000375218 CYP4A11Q02928 519 aa10□□□□□ -0.81
UBR4-201ENST00000375218 NAA30Q147X3 362 aaPredicted RBP10□□□□□ -0.81
UBR4-201ENST00000375218 CCDC122Q5T0U0 273 aa10□□□□□ -0.81
UBR4-201ENST00000375218 TMC4Q7Z404 712 aa10□□□□□ -0.81
UBR4-201ENST00000375218 ZBTB46Q86UZ6 589 aa10□□□□□ -0.81
UBR4-201ENST00000375218 MTRRQ9UBK8 725 aa10□□□□□ -0.81
UBR4-201ENST00000375218 SSUH2Q9Y2M2 353 aa10□□□□□ -0.81
UBR4-201ENST00000375218 SERTM1A2A2V5 107 aa10□□□□□ -0.81
UBR4-201ENST00000375218 CYP17A1P05093 508 aa10□□□□□ -0.81
UBR4-201ENST00000375218 ATP5OP48047 213 aa10□□□□□ -0.81
UBR4-201ENST00000375218 RXRGP48443 463 aa10□□□□□ -0.81
UBR4-201ENST00000375218 DPYDQ12882 1025 aa10□□□□□ -0.81
UBR4-201ENST00000375218 IFIT5Q13325 482 aaKnown RBP10□□□□□ -0.81
UBR4-201ENST00000375218 LDHAL6AQ6ZMR3 332 aa10□□□□□ -0.81
UBR4-201ENST00000375218 RIC3Q7Z5B4 369 aa10□□□□□ -0.81
UBR4-201ENST00000375218 RASEFQ8IZ41 740 aa10□□□□□ -0.81
UBR4-201ENST00000375218 GALNT6Q8NCL4 622 aa10□□□□□ -0.81
UBR4-201ENST00000375218 CHAC2Q8WUX2 184 aa10□□□□□ -0.81
UBR4-201ENST00000375218 CFAP36Q96G28 342 aa10□□□□□ -0.81
UBR4-201ENST00000375218 NLRP3Q96P20 1036 aa10□□□□□ -0.81
UBR4-201ENST00000375218 EIF2AK3Q9NZJ5 1116 aaKnown RBP10□□□□□ -0.81
UBR4-201ENST00000375218 LAMB2P55268 1798 aa10□□□□□ -0.81
UBR4-201ENST00000375218 ZBTB7BO15156 539 aaPredicted RBP9.99□□□□□ -0.81
UBR4-201ENST00000375218 CYP27B1O15528 508 aa9.99□□□□□ -0.81
UBR4-201ENST00000375218 NLRP6P59044 892 aa9.99□□□□□ -0.81
UBR4-201ENST00000375218 SMUG1Q53HV7 270 aa9.99□□□□□ -0.81
UBR4-201ENST00000375218 PPP2R2DQ66LE6 453 aa9.99□□□□□ -0.81
UBR4-201ENST00000375218 SPATA18Q8TC71 538 aa9.99□□□□□ -0.81
UBR4-201ENST00000375218 PI4K2BQ8TCG2 481 aa9.99□□□□□ -0.81
UBR4-201ENST00000375218 SGCDQ92629 289 aa9.99□□□□□ -0.81
UBR4-201ENST00000375218 TSGA13Q96PP4 275 aa9.99□□□□□ -0.81
UBR4-201ENST00000375218 ZBTB40Q9NUA8 1239 aa9.99□□□□□ -0.81
UBR4-201ENST00000375218 ANKIB1Q9P2G1 1089 aa9.99□□□□□ -0.81
UBR4-201ENST00000375218 NUP98P52948 1817 aa9.99□□□□□ -0.81
UBR4-201ENST00000375218 HTTP42858 3142 aa9.99□□□□□ -0.81
UBR4-201ENST00000375218 CASQ2O14958 399 aaPredicted RBP9.99□□□□□ -0.81
UBR4-201ENST00000375218 YARSP54577 528 aaKnown RBP9.99□□□□□ -0.81
UBR4-201ENST00000375218 MPP3Q13368 585 aa9.99□□□□□ -0.81
UBR4-201ENST00000375218 ANKDD1AQ495B1 522 aa9.99□□□□□ -0.81
UBR4-201ENST00000375218 MUM1L1Q5H9M0 696 aa9.99□□□□□ -0.81
UBR4-201ENST00000375218 LHFPL2Q6ZUX7 228 aa9.99□□□□□ -0.81
UBR4-201ENST00000375218 FAM76AQ8TAV0 307 aa9.99□□□□□ -0.81
UBR4-201ENST00000375218 VPS37BQ9H9H4 285 aa9.99□□□□□ -0.81
UBR4-201ENST00000375218 OVOS2A0A0G2JMS6 1433 aa9.99□□□□□ -0.81
UBR4-201ENST00000375218 FRMD3A2A2Y4 597 aa9.99□□□□□ -0.81
UBR4-201ENST00000375218 MTSS1O43312 755 aa9.99□□□□□ -0.81
UBR4-201ENST00000375218 WDR43Q15061 677 aaKnown RBP eCLIP9.99□□□□□ -0.81
UBR4-201ENST00000375218 PROSER3Q2NL68 480 aa9.99□□□□□ -0.81
UBR4-201ENST00000375218 SETMARQ53H47 684 aaPredicted RBP9.99□□□□□ -0.81
UBR4-201ENST00000375218 TRIML2Q8N7C3 387 aa9.99□□□□□ -0.81
UBR4-201ENST00000375218 SPATA17Q96L03 361 aa9.99□□□□□ -0.81
UBR4-201ENST00000375218 COG8Q96MW5 612 aa9.99□□□□□ -0.81
UBR4-201ENST00000375218 EDEM3Q9BZQ6 932 aa9.99□□□□□ -0.81
UBR4-201ENST00000375218 ATP6V0A4Q9HBG4 840 aa9.99□□□□□ -0.81
UBR4-201ENST00000375218 KIAA1586Q9HCI6 787 aa9.99□□□□□ -0.81
UBR4-201ENST00000375218 SRA1Q9HD15 236 aaKnown RBP9.99□□□□□ -0.81
UBR4-201ENST00000375218 LY75O60449 1722 aa9.99□□□□□ -0.81
UBR4-201ENST00000375218 CLASP2O75122 1294 aaKnown RBP9.98□□□□□ -0.81
UBR4-201ENST00000375218 AKR1B1P15121 316 aa9.98□□□□□ -0.81
UBR4-201ENST00000375218 HSPA6P17066 643 aa9.98□□□□□ -0.81
UBR4-201ENST00000375218 GARTP22102 1010 aa9.98□□□□□ -0.81
UBR4-201ENST00000375218 SP140Q13342 867 aa9.98□□□□□ -0.81
UBR4-201ENST00000375218 PPP1R7Q15435 360 aa9.98□□□□□ -0.81
UBR4-201ENST00000375218 WSCD2Q2TBF2 565 aa9.98□□□□□ -0.81
UBR4-201ENST00000375218 BEND5Q7L4P6 421 aa9.98□□□□□ -0.81
UBR4-201ENST00000375218 GOLGA5Q8TBA6 731 aa9.98□□□□□ -0.81
UBR4-201ENST00000375218 ARL8AQ96BM9 186 aa9.98□□□□□ -0.81
UBR4-201ENST00000375218 DHTKD1Q96HY7 919 aaPredicted RBP9.98□□□□□ -0.81
UBR4-201ENST00000375218 STRBPQ96SI9 672 aaKnown RBP9.98□□□□□ -0.81
UBR4-201ENST00000375218 TTC12Q9H892 705 aaPredicted RBP9.98□□□□□ -0.81
UBR4-201ENST00000375218 ZFYVE28Q9HCC9 887 aa9.98□□□□□ -0.81
UBR4-201ENST00000375218 MKI67P46013 3256 aaKnown RBP9.98□□□□□ -0.81
UBR4-201ENST00000375218 BCORQ6W2J9 1755 aa9.98□□□□□ -0.81
UBR4-201ENST00000375218 KIF2AO00139 706 aaPredicted RBP9.98□□□□□ -0.81
UBR4-201ENST00000375218 ATP1A3P13637 1013 aa9.98□□□□□ -0.81
UBR4-201ENST00000375218 RPS6KA3P51812 740 aa9.98□□□□□ -0.81
UBR4-201ENST00000375218 FAM102BQ5T8I3 360 aa9.98□□□□□ -0.81
UBR4-201ENST00000375218 CCDC116Q8IYX3 515 aa9.98□□□□□ -0.81
UBR4-201ENST00000375218 GPRASP2Q96D09 838 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms