RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 UBXN2AP68543 259 aa18.93■□□□□ 0.62
RXRB-201ENST00000374680 TRMT1LQ7Z2T5 733 aaKnown RBP18.93■□□□□ 0.62
RXRB-201ENST00000374680 GPBP1Q86WP2 473 aa18.93■□□□□ 0.62
RXRB-201ENST00000374680 NOC3LQ8WTT2 800 aaKnown RBP18.93■□□□□ 0.62
RXRB-201ENST00000374680 IFIH1Q9BYX4 1025 aaKnown RBP18.93■□□□□ 0.62
RXRB-201ENST00000374680 CAPN6Q9Y6Q1 641 aa18.93■□□□□ 0.62
RXRB-201ENST00000374680 KIF20AO95235 890 aa18.93■□□□□ 0.62
RXRB-201ENST00000374680 FXR2P51116 673 aaKnown RBP eCLIP18.93■□□□□ 0.62
RXRB-201ENST00000374680 PABPC4Q13310 644 aaKnown RBP eCLIP18.93■□□□□ 0.627e-9■■■□□ 15.2
RXRB-201ENST00000374680 P2RX7Q99572 595 aaKnown RBP18.93■□□□□ 0.62
RXRB-201ENST00000374680 TDRD3Q9H7E2 651 aaKnown RBP18.93■□□□□ 0.62
RXRB-201ENST00000374680 SCAF8Q9UPN6 1271 aaKnown RBP18.93■□□□□ 0.62
RXRB-201ENST00000374680 NAV1Q8NEY1 1877 aa18.92■□□□□ 0.62
RXRB-201ENST00000374680 SFI1A8K8P3 1242 aa18.92■□□□□ 0.62
RXRB-201ENST00000374680 RASSF7Q02833 373 aa18.92■□□□□ 0.62
RXRB-201ENST00000374680 WHAMMP3Q1A5X7 153 aa18.92■□□□□ 0.62
RXRB-201ENST00000374680 MYOCDQ8IZQ8 938 aa18.92■□□□□ 0.62
RXRB-201ENST00000374680 MYH1P12882 1939 aa18.92■□□□□ 0.62
RXRB-201ENST00000374680 CDC37Q16543 378 aaPredicted RBP18.92■□□□□ 0.62
RXRB-201ENST00000374680 FAM26FQ5R3K3 315 aa18.92■□□□□ 0.62
RXRB-201ENST00000374680 CERS3Q8IU89 383 aa18.92■□□□□ 0.62
RXRB-201ENST00000374680 SBF2Q86WG5 1849 aa18.92■□□□□ 0.62
RXRB-201ENST00000374680 ESYT2A0FGR8 921 aa18.91■□□□□ 0.62
RXRB-201ENST00000374680 LMAN1P49257 510 aa18.91■□□□□ 0.62
RXRB-201ENST00000374680 BRD3Q15059 726 aa18.91■□□□□ 0.62
RXRB-201ENST00000374680 EZH2Q15910 746 aaKnown RBP18.91■□□□□ 0.62
RXRB-201ENST00000374680 ZYXQ15942 572 aaKnown RBP18.91■□□□□ 0.62
RXRB-201ENST00000374680 TRAPPC11Q7Z392 1133 aa18.91■□□□□ 0.62
RXRB-201ENST00000374680 NUP58Q9BVL2 599 aa18.91■□□□□ 0.62
RXRB-201ENST00000374680 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.91■□□□□ 0.62
RXRB-201ENST00000374680 IGKV6D-41A0A0C4DH26 115 aa18.91■□□□□ 0.62
RXRB-201ENST00000374680 PLA2G4BP0C869 781 aa18.91■□□□□ 0.62
RXRB-201ENST00000374680 SNHG28P0DPA3 235 aa18.91■□□□□ 0.62
RXRB-201ENST00000374680 CHRNA5P30532 468 aa18.91■□□□□ 0.62
RXRB-201ENST00000374680 KIF11P52732 1056 aa18.91■□□□□ 0.62
RXRB-201ENST00000374680 COG1Q8WTW3 980 aa18.91■□□□□ 0.62
RXRB-201ENST00000374680 SECISBP2LQ93073 1101 aaKnown RBP18.91■□□□□ 0.62
RXRB-201ENST00000374680 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.91■□□□□ 0.62
RXRB-201ENST00000374680 IKZF4Q9H2S9 585 aa18.91■□□□□ 0.62
RXRB-201ENST00000374680 MAGEF1Q9HAY2 307 aa18.91■□□□□ 0.62
RXRB-201ENST00000374680 BMP2KQ9NSY1 1161 aaPredicted RBP18.91■□□□□ 0.62
RXRB-201ENST00000374680 STK17AQ9UEE5 414 aa18.91■□□□□ 0.62
RXRB-201ENST00000374680 TRPC5Q9UL62 973 aaPredicted RBP18.91■□□□□ 0.62
RXRB-201ENST00000374680 MED24O75448 989 aa18.9■□□□□ 0.62
RXRB-201ENST00000374680 POLR2FP61218 127 aaKnown RBP18.9■□□□□ 0.62
RXRB-201ENST00000374680 JAG1P78504 1218 aa18.9■□□□□ 0.62
RXRB-201ENST00000374680 MEA1Q16626 185 aa18.9■□□□□ 0.62
RXRB-201ENST00000374680 RIN2Q8WYP3 895 aaPredicted RBP18.9■□□□□ 0.62
RXRB-201ENST00000374680 DNAJC19Q96DA6 116 aa18.9■□□□□ 0.62
RXRB-201ENST00000374680 SALL4Q9UJQ4 1053 aa18.9■□□□□ 0.62
RXRB-201ENST00000374680 PCDHA13Q9Y5I0 950 aa18.9■□□□□ 0.62
RXRB-201ENST00000374680 SLC7A5Q01650 507 aa18.9■□□□□ 0.62
RXRB-201ENST00000374680 MAN2A1Q16706 1144 aa18.9■□□□□ 0.62
RXRB-201ENST00000374680 TSG101Q99816 390 aa18.9■□□□□ 0.62
RXRB-201ENST00000374680 SIK3Q9Y2K2 1263 aa18.9■□□□□ 0.62
RXRB-201ENST00000374680 LRRIQ3A6PVS8 624 aaPredicted RBP18.9■□□□□ 0.62
RXRB-201ENST00000374680 MYH10P35580 1976 aa18.9■□□□□ 0.62
RXRB-201ENST00000374680 MAGEA1P43355 309 aa18.9■□□□□ 0.62
RXRB-201ENST00000374680 NFRKBQ6P4R8 1299 aa18.9■□□□□ 0.62
RXRB-201ENST00000374680 SH3BP5LQ7L8J4 393 aa18.9■□□□□ 0.62
RXRB-201ENST00000374680 KRT27Q7Z3Y8 459 aa18.9■□□□□ 0.62
RXRB-201ENST00000374680 GUF1Q8N442 669 aaKnown RBP18.9■□□□□ 0.62
RXRB-201ENST00000374680 ERGIC2Q96RQ1 377 aa18.9■□□□□ 0.62
RXRB-201ENST00000374680 ANO3Q9BYT9 981 aa18.9■□□□□ 0.62
RXRB-201ENST00000374680 CHMP2AO43633 222 aa18.89■□□□□ 0.61
RXRB-201ENST00000374680 ERLIN1O75477 346 aa18.89■□□□□ 0.61
RXRB-201ENST00000374680 PDIA5Q14554 519 aa18.89■□□□□ 0.61
RXRB-201ENST00000374680 CASP8Q14790 479 aa18.89■□□□□ 0.61
RXRB-201ENST00000374680 HDXQ7Z353 690 aa18.89■□□□□ 0.61
RXRB-201ENST00000374680 L1RE1Q9UN81 338 aa18.89■□□□□ 0.61
RXRB-201ENST00000374680 FAN1Q9Y2M0 1017 aa18.89■□□□□ 0.61
RXRB-201ENST00000374680 PVALEFA0A1B0GWK0 134 aa18.89■□□□□ 0.61
RXRB-201ENST00000374680 EIF3CLB5ME19 914 aaKnown RBP18.89■□□□□ 0.61
RXRB-201ENST00000374680 F5H6K3 240 aa18.89■□□□□ 0.61
RXRB-201ENST00000374680 PSMD14O00487 310 aa18.89■□□□□ 0.61
RXRB-201ENST00000374680 SMARCA1P28370 1054 aa18.89■□□□□ 0.61
RXRB-201ENST00000374680 CASP5P51878 434 aa18.89■□□□□ 0.61
RXRB-201ENST00000374680 ICA1Q05084 483 aa18.89■□□□□ 0.61
RXRB-201ENST00000374680 KLRC3Q07444 240 aa18.89■□□□□ 0.61
RXRB-201ENST00000374680 LRRC55Q6ZSA7 311 aa18.89■□□□□ 0.61
RXRB-201ENST00000374680 HDAC7Q8WUI4 952 aa18.89■□□□□ 0.61
RXRB-201ENST00000374680 TBC1D5Q92609 795 aa18.89■□□□□ 0.61
RXRB-201ENST00000374680 EIF3CQ99613 913 aaKnown RBP18.89■□□□□ 0.61
RXRB-201ENST00000374680 LSM14BQ9BX40 385 aaKnown RBP18.89■□□□□ 0.61
RXRB-201ENST00000374680 MYO1AQ9UBC5 1043 aa18.89■□□□□ 0.61
RXRB-201ENST00000374680 COL24A1Q17RW2 1714 aa18.89■□□□□ 0.61
RXRB-201ENST00000374680 KCNMA1Q12791 1236 aa18.88■□□□□ 0.61
RXRB-201ENST00000374680 GPATCH4Q5T3I0 446 aaKnown RBP18.88■□□□□ 0.61
RXRB-201ENST00000374680 FAM198AQ9UFP1 575 aa18.88■□□□□ 0.61
RXRB-201ENST00000374680 ADAM21Q9UKJ8 722 aa18.88■□□□□ 0.61
RXRB-201ENST00000374680 GH2P01242 217 aa18.88■□□□□ 0.61
RXRB-201ENST00000374680 MYBL2P10244 700 aa18.88■□□□□ 0.61
RXRB-201ENST00000374680 ACTN1P12814 892 aa18.88■□□□□ 0.61
RXRB-201ENST00000374680 VAV2P52735 878 aa18.88■□□□□ 0.61
RXRB-201ENST00000374680 PACSIN2Q9UNF0 486 aaPredicted RBP18.88■□□□□ 0.61
RXRB-201ENST00000374680 PLAGL2Q9UPG8 496 aa18.88■□□□□ 0.61
RXRB-201ENST00000374680 CLRN2A0PK11 232 aa18.87■□□□□ 0.61
RXRB-201ENST00000374680 RSPH10B2B2RC85 870 aa18.87■□□□□ 0.61
RXRB-201ENST00000374680 RSPH10BP0C881 870 aa18.87■□□□□ 0.61
RXRB-201ENST00000374680 NOVP48745 357 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms