RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 ZNF341Q9BYN7 854 aa14.06□□□□□ -0.16
PRPF4-202ENST00000374199 PPP1R9AQ9ULJ8 1098 aa14.06□□□□□ -0.16
PRPF4-202ENST00000374199 SCN4AP35499 1836 aa14.06□□□□□ -0.16
PRPF4-202ENST00000374199 GCOM1H8Y6P7 765 aaPredicted RBP14.05□□□□□ -0.16
PRPF4-202ENST00000374199 PSMA7O14818 248 aa14.05□□□□□ -0.16
PRPF4-202ENST00000374199 POLR2MP0CAP2 368 aa14.05□□□□□ -0.16
PRPF4-202ENST00000374199 FCER1AP12319 257 aa14.05□□□□□ -0.16
PRPF4-202ENST00000374199 TAL1P17542 331 aaPredicted RBP14.05□□□□□ -0.16
PRPF4-202ENST00000374199 CYP11B2P19099 503 aa14.05□□□□□ -0.16
PRPF4-202ENST00000374199 SETQ01105 290 aaPredicted RBP14.05□□□□□ -0.16
PRPF4-202ENST00000374199 LRRC55Q6ZSA7 311 aa14.05□□□□□ -0.16
PRPF4-202ENST00000374199 SYT2Q8N9I0 419 aaPredicted RBP14.05□□□□□ -0.16
PRPF4-202ENST00000374199 DDX12PQ92771 950 aa14.05□□□□□ -0.16
PRPF4-202ENST00000374199 NAA15Q9BXJ9 866 aaKnown RBP14.05□□□□□ -0.16
PRPF4-202ENST00000374199 BCS1LQ9Y276 419 aa14.05□□□□□ -0.16
PRPF4-202ENST00000374199 POLR2AP24928 1970 aaKnown RBP14.05□□□□□ -0.16
PRPF4-202ENST00000374199 GYPCP04921 128 aa14.05□□□□□ -0.16
PRPF4-202ENST00000374199 HIRAP54198 1017 aaPredicted RBP14.05□□□□□ -0.16
PRPF4-202ENST00000374199 MCCD1P59942 119 aaPredicted RBP14.05□□□□□ -0.16
PRPF4-202ENST00000374199 LRRC63Q05C16 580 aa14.05□□□□□ -0.16
PRPF4-202ENST00000374199 BMT2Q1RMZ1 405 aa14.05□□□□□ -0.16
PRPF4-202ENST00000374199 USH1GQ495M9 461 aa14.05□□□□□ -0.16
PRPF4-202ENST00000374199 SH3D19Q5HYK7 790 aa14.05□□□□□ -0.16
PRPF4-202ENST00000374199 HAUS3Q68CZ6 603 aa14.05□□□□□ -0.16
PRPF4-202ENST00000374199 ANKRD40Q6AI12 368 aa14.05□□□□□ -0.16
PRPF4-202ENST00000374199 MYRIPQ8NFW9 859 aa14.05□□□□□ -0.16
PRPF4-202ENST00000374199 TUFT1Q9NNX1 390 aa14.05□□□□□ -0.16
PRPF4-202ENST00000374199 EXOC1Q9NV70 894 aa14.05□□□□□ -0.16
PRPF4-202ENST00000374199 SIP14410 1827 aa14.05□□□□□ -0.16
PRPF4-202ENST00000374199 TRIM49BA6NDI0 452 aa14.05□□□□□ -0.16
PRPF4-202ENST00000374199 TPM2P07951 284 aa14.05□□□□□ -0.16
PRPF4-202ENST00000374199 VCAM1P19320 739 aa14.05□□□□□ -0.16
PRPF4-202ENST00000374199 USP14P54578 494 aa14.05□□□□□ -0.16
PRPF4-202ENST00000374199 TRIM14Q14142 442 aa14.05□□□□□ -0.16
PRPF4-202ENST00000374199 FIGNQ5HY92 759 aa14.05□□□□□ -0.16
PRPF4-202ENST00000374199 ARHGAP6O43182 974 aa14.04□□□□□ -0.16
PRPF4-202ENST00000374199 MFAP3LO75121 409 aa14.04□□□□□ -0.16
PRPF4-202ENST00000374199 PTPRAP18433 802 aa14.04□□□□□ -0.16
PRPF4-202ENST00000374199 LMNB1P20700 586 aa14.04□□□□□ -0.16
PRPF4-202ENST00000374199 PDE4DQ08499 809 aa14.04□□□□□ -0.16
PRPF4-202ENST00000374199 NBPF12Q5TAG4 269 aaPredicted RBP14.04□□□□□ -0.16
PRPF4-202ENST00000374199 DCAF15Q66K64 600 aa14.04□□□□□ -0.16
PRPF4-202ENST00000374199 TBC1D5Q92609 795 aa14.04□□□□□ -0.16
PRPF4-202ENST00000374199 GJA10Q969M2 543 aa14.04□□□□□ -0.16
PRPF4-202ENST00000374199 FBXO28Q9NVF7 368 aa14.04□□□□□ -0.16
PRPF4-202ENST00000374199 MYPNQ86TC9 1320 aa14.04□□□□□ -0.16
PRPF4-202ENST00000374199 RASSF10A6NK89 507 aa14.04□□□□□ -0.16
PRPF4-202ENST00000374199 CTIFO43310 598 aaKnown RBP14.04□□□□□ -0.16
PRPF4-202ENST00000374199 STX17P56962 302 aa14.04□□□□□ -0.16
PRPF4-202ENST00000374199 STIM1Q13586 685 aa14.04□□□□□ -0.16
PRPF4-202ENST00000374199 REXO1L1PQ8IX06 675 aa14.04□□□□□ -0.16
PRPF4-202ENST00000374199 TRPM4Q8TD43 1214 aa14.04□□□□□ -0.16
PRPF4-202ENST00000374199 KLRG1Q96E93 195 aa14.04□□□□□ -0.16
PRPF4-202ENST00000374199 PPP1R13BQ96KQ4 1090 aa14.04□□□□□ -0.16
PRPF4-202ENST00000374199 PLIN2Q99541 437 aa14.04□□□□□ -0.16
PRPF4-202ENST00000374199 COL20A1Q9P218 1284 aa14.04□□□□□ -0.16
PRPF4-202ENST00000374199 UBIAD1Q9Y5Z9 338 aa14.04□□□□□ -0.16
PRPF4-202ENST00000374199 BACE1P56817 501 aa14.03□□□□□ -0.16
PRPF4-202ENST00000374199 ASIC1P78348 528 aa14.03□□□□□ -0.16
PRPF4-202ENST00000374199 COASYQ13057 564 aa14.03□□□□□ -0.16
PRPF4-202ENST00000374199 CYP2W1Q8TAV3 490 aa14.03□□□□□ -0.16
PRPF4-202ENST00000374199 KCTD10Q9H3F6 313 aa14.03□□□□□ -0.16
PRPF4-202ENST00000374199 DHX15O43143 795 aaKnown RBP14.03□□□□□ -0.16
PRPF4-202ENST00000374199 PLA2G4BP0C869 781 aa14.03□□□□□ -0.16
PRPF4-202ENST00000374199 HOXA13P31271 388 aaPredicted RBP14.03□□□□□ -0.16
PRPF4-202ENST00000374199 PRR16Q569H4 304 aa14.03□□□□□ -0.16
PRPF4-202ENST00000374199 PCNX4Q63HM2 1172 aa14.03□□□□□ -0.16
PRPF4-202ENST00000374199 RIT2Q99578 217 aa14.03□□□□□ -0.16
PRPF4-202ENST00000374199 NFIL3Q16649 462 aa14.03□□□□□ -0.16
PRPF4-202ENST00000374199 CEP55Q53EZ4 464 aa14.03□□□□□ -0.16
PRPF4-202ENST00000374199 CEP135Q66GS9 1140 aa14.03□□□□□ -0.16
PRPF4-202ENST00000374199 KLHL10Q6JEL2 608 aa14.03□□□□□ -0.16
PRPF4-202ENST00000374199 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.03□□□□□ -0.16
PRPF4-202ENST00000374199 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.03□□□□□ -0.16
PRPF4-202ENST00000374199 ERGIC2Q96RQ1 377 aa14.03□□□□□ -0.16
PRPF4-202ENST00000374199 DNAJC7Q99615 494 aa14.03□□□□□ -0.16
PRPF4-202ENST00000374199 POTEB3A0JP26 581 aa14.02□□□□□ -0.16
PRPF4-202ENST00000374199 POTECB2RU33 542 aa14.02□□□□□ -0.16
PRPF4-202ENST00000374199 EML1O00423 815 aa14.02□□□□□ -0.16
PRPF4-202ENST00000374199 POTEBQ6S5H4 581 aa14.02□□□□□ -0.16
PRPF4-202ENST00000374199 MB21D1Q8N884 522 aa14.02□□□□□ -0.16
PRPF4-202ENST00000374199 KIFC2Q96AC6 838 aa14.02□□□□□ -0.16
PRPF4-202ENST00000374199 EHMT1Q9H9B1 1298 aa14.02□□□□□ -0.16
PRPF4-202ENST00000374199 A0A1W2PQJ5 194 aa14.02□□□□□ -0.17
PRPF4-202ENST00000374199 CCT6AP40227 531 aaKnown RBP14.02□□□□□ -0.17
PRPF4-202ENST00000374199 STAT3P40763 770 aa14.02□□□□□ -0.17
PRPF4-202ENST00000374199 ZNF131P52739 623 aa14.02□□□□□ -0.17
PRPF4-202ENST00000374199 GIT2Q14161 759 aa14.02□□□□□ -0.17
PRPF4-202ENST00000374199 TBC1D10BQ4KMP7 808 aaPredicted RBP14.02□□□□□ -0.17
PRPF4-202ENST00000374199 TRIM65Q6PJ69 517 aa14.02□□□□□ -0.17
PRPF4-202ENST00000374199 ARHGAP27Q6ZUM4 889 aa14.02□□□□□ -0.17
PRPF4-202ENST00000374199 CCDC47Q96A33 483 aaKnown RBP14.02□□□□□ -0.17
PRPF4-202ENST00000374199 AFG3L2Q9Y4W6 797 aa14.02□□□□□ -0.17
PRPF4-202ENST00000374199 C19orf81C9J6K1 198 aa14.02□□□□□ -0.17
PRPF4-202ENST00000374199 KIF2AO00139 706 aaPredicted RBP14.02□□□□□ -0.17
PRPF4-202ENST00000374199 MCF2L2Q86YR7 1114 aa14.02□□□□□ -0.17
PRPF4-202ENST00000374199 AGBL1Q96MI9 1066 aa14.02□□□□□ -0.17
PRPF4-202ENST00000374199 MXRA8Q9BRK3 442 aa14.02□□□□□ -0.17
PRPF4-202ENST00000374199 KCND2Q9NZV8 630 aa14.02□□□□□ -0.17
PRPF4-202ENST00000374199 KIAA1217Q5T5P2 1943 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms