RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 ANKRD13DQ6ZTN6 518 aa14.19□□□□□ -0.14
PRPF4-201ENST00000374198 NOX5Q96PH1 765 aa14.19□□□□□ -0.14
PRPF4-201ENST00000374198 FAM129AQ9BZQ8 928 aa14.19□□□□□ -0.14
PRPF4-201ENST00000374198 CNOT10Q9H9A5 744 aaKnown RBP14.19□□□□□ -0.14
PRPF4-201ENST00000374198 PLAGL2Q9UPG8 496 aa14.19□□□□□ -0.14
PRPF4-201ENST00000374198 PJA2O43164 708 aa14.19□□□□□ -0.14
PRPF4-201ENST00000374198 KIF4AO95239 1232 aa14.19□□□□□ -0.14
PRPF4-201ENST00000374198 BMP15O95972 392 aa14.19□□□□□ -0.14
PRPF4-201ENST00000374198 CCNG1P51959 295 aa14.19□□□□□ -0.14
PRPF4-201ENST00000374198 KCNJ2P63252 427 aa14.19□□□□□ -0.14
PRPF4-201ENST00000374198 PIGWQ7Z7B1 504 aa14.19□□□□□ -0.14
PRPF4-201ENST00000374198 CCDC82Q8N4S0 544 aa14.19□□□□□ -0.14
PRPF4-201ENST00000374198 ANKRD13CQ8N6S4 541 aa14.19□□□□□ -0.14
PRPF4-201ENST00000374198 MTMR8Q96EF0 704 aa14.19□□□□□ -0.14
PRPF4-201ENST00000374198 ZNF317Q96PQ6 595 aaPredicted RBP14.19□□□□□ -0.14
PRPF4-201ENST00000374198 MOV10L1Q9BXT6 1211 aaKnown RBP14.19□□□□□ -0.14
PRPF4-201ENST00000374198 AGAP1Q9UPQ3 857 aa14.19□□□□□ -0.14
PRPF4-201ENST00000374198 RPS6KL1Q9Y6S9 549 aa14.19□□□□□ -0.14
PRPF4-201ENST00000374198 SMIM24O75264 130 aa14.18□□□□□ -0.14
PRPF4-201ENST00000374198 EIF4A3P38919 411 aaKnown RBP14.18□□□□□ -0.14
PRPF4-201ENST00000374198 MAGEA1P43355 309 aa14.18□□□□□ -0.14
PRPF4-201ENST00000374198 ALDH5A1P51649 535 aaPredicted RBP14.18□□□□□ -0.14
PRPF4-201ENST00000374198 LAMB3Q13751 1172 aa14.18□□□□□ -0.14
PRPF4-201ENST00000374198 IFI16Q16666 785 aaKnown RBP14.18□□□□□ -0.14
PRPF4-201ENST00000374198 TRPM8Q7Z2W7 1104 aa14.18□□□□□ -0.14
PRPF4-201ENST00000374198 ERICH1Q86X53 443 aa14.18□□□□□ -0.14
PRPF4-201ENST00000374198 C2CD5Q86YS7 1000 aa14.18□□□□□ -0.14
PRPF4-201ENST00000374198 SPICE1Q8N0Z3 855 aa14.18□□□□□ -0.14
PRPF4-201ENST00000374198 CRACR2BQ8N4Y2 399 aaPredicted RBP14.18□□□□□ -0.14
PRPF4-201ENST00000374198 TEX9Q8N6V9 391 aa14.18□□□□□ -0.14
PRPF4-201ENST00000374198 TRIM47Q96LD4 638 aa14.18□□□□□ -0.14
PRPF4-201ENST00000374198 AKR1B10O60218 316 aa14.18□□□□□ -0.14
PRPF4-201ENST00000374198 CTNND1O60716 968 aaKnown RBP14.18□□□□□ -0.14
PRPF4-201ENST00000374198 CASP7P55210 303 aa14.18□□□□□ -0.14
PRPF4-201ENST00000374198 ERVK-9P63128 1117 aa14.18□□□□□ -0.14
PRPF4-201ENST00000374198 CUL1Q13616 776 aa14.18□□□□□ -0.14
PRPF4-201ENST00000374198 ARMC3Q5W041 872 aa14.18□□□□□ -0.14
PRPF4-201ENST00000374198 MDM1Q8TC05 714 aa14.18□□□□□ -0.14
PRPF4-201ENST00000374198 ABCC12Q96J65 1359 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 SPDYE3A6NKU9 549 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 TNNC1P63316 161 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 MAP3K12Q12852 859 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 LRRC24Q50LG9 513 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 EARS2Q5JPH6 523 aaKnown RBP14.17□□□□□ -0.14
PRPF4-201ENST00000374198 CACNA2D4Q7Z3S7 1137 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 GALNT15Q8N3T1 639 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 RNF10Q8N5U6 811 aaKnown RBP14.17□□□□□ -0.14
PRPF4-201ENST00000374198 KLHL23Q8NBE8 558 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 LPIN2Q92539 896 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 PRCCQ92733 491 aaPredicted RBP14.17□□□□□ -0.14
PRPF4-201ENST00000374198 EZH1Q92800 747 aaPredicted RBP14.17□□□□□ -0.14
PRPF4-201ENST00000374198 PSMD1Q99460 953 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 PAIP2Q9BPZ3 127 aaKnown RBP14.17□□□□□ -0.14
PRPF4-201ENST00000374198 PYM1Q9BRP8 204 aaKnown RBP14.17□□□□□ -0.14
PRPF4-201ENST00000374198 MYH10P35580 1976 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 NID2Q14112 1375 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 DPPA5A6NC42 116 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 BUB1O43683 1085 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 EVI5O60447 810 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 ZPR1O75312 459 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 FOXO4P98177 505 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 MTMR3Q13615 1198 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 RTN1Q16799 776 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 C1orf141Q5JVX7 400 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 MTHFD1LQ6UB35 978 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 CMTR1Q8N1G2 835 aaKnown RBP14.17□□□□□ -0.14
PRPF4-201ENST00000374198 ZFAND2BQ8WV99 257 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 UBLCP1Q8WVY7 318 aaPredicted RBP14.17□□□□□ -0.14
PRPF4-201ENST00000374198 RGL1Q9NZL6 768 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 ATP5J2-PTCD1G3V325 749 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 WNT7AO00755 349 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 CYP27B1O15528 508 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 PTCD1O75127 700 aaKnown RBP14.17□□□□□ -0.14
PRPF4-201ENST00000374198 PYGLP06737 847 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 ATP2A2P16615 1042 aaKnown RBP14.17□□□□□ -0.14
PRPF4-201ENST00000374198 KIF5BP33176 963 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 SEPT2Q15019 361 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 TAF11Q15544 211 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 ZNF174Q15697 407 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 KLHL7Q8IXQ5 586 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 NAF1Q96HR8 494 aaKnown RBP14.17□□□□□ -0.14
PRPF4-201ENST00000374198 ANKRD27Q96NW4 1050 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 ERGIC2Q96RQ1 377 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 PLCD4Q9BRC7 762 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 FBXL5Q9UKA1 691 aa14.17□□□□□ -0.14
PRPF4-201ENST00000374198 SHANK3Q9BYB0 1731 aa14.16□□□□□ -0.14
PRPF4-201ENST00000374198 EYA2O00167 538 aa14.16□□□□□ -0.14
PRPF4-201ENST00000374198 PLSCR1O15162 318 aa14.16□□□□□ -0.14
PRPF4-201ENST00000374198 UPP2O95045 317 aa14.16□□□□□ -0.14
PRPF4-201ENST00000374198 NCALDP61601 193 aa14.16□□□□□ -0.14
PRPF4-201ENST00000374198 TTI2Q6NXR4 508 aa14.16□□□□□ -0.14
PRPF4-201ENST00000374198 INPP4AQ96PE3 977 aaPredicted RBP14.16□□□□□ -0.14
PRPF4-201ENST00000374198 INCENPQ9NQS7 918 aa14.16□□□□□ -0.14
PRPF4-201ENST00000374198 ZSWIM5Q9P217 1185 aa14.16□□□□□ -0.14
PRPF4-201ENST00000374198 GOLGA6L10A0A0M3HER8 536 aa14.16□□□□□ -0.14
PRPF4-201ENST00000374198 RARAP10276 462 aa14.16□□□□□ -0.14
PRPF4-201ENST00000374198 DNA2P51530 1060 aa14.16□□□□□ -0.14
PRPF4-201ENST00000374198 RASSF7Q02833 373 aa14.16□□□□□ -0.14
PRPF4-201ENST00000374198 KRT71Q3SY84 523 aa14.16□□□□□ -0.14
PRPF4-201ENST00000374198 CHADLQ6NUI6 762 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms