RNA–Protein interactions for RNA: ENST00000373741.8

PUM1-202, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 1 (best) BASIC

Gene PUM1, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-202ENST00000373741 GMLQ99445 158 aa12.9□□□□□ -0.34
PUM1-202ENST00000373741 MRIQ9BWK5 157 aa12.9□□□□□ -0.34
PUM1-202ENST00000373741 SLC39A2Q9NP94 309 aa12.9□□□□□ -0.34
PUM1-202ENST00000373741 TMOD4Q9NZQ9 345 aa12.9□□□□□ -0.34
PUM1-202ENST00000373741 TESPA1A2RU30 521 aaPredicted RBP12.89□□□□□ -0.35
PUM1-202ENST00000373741 ARHGAP4P98171 946 aa12.89□□□□□ -0.35
PUM1-202ENST00000373741 FANCCQ00597 558 aa12.89□□□□□ -0.35
PUM1-202ENST00000373741 TATDN1Q6P1N9 297 aa12.89□□□□□ -0.35
PUM1-202ENST00000373741 VPS16Q9H269 839 aa12.89□□□□□ -0.35
PUM1-202ENST00000373741 DISC1Q9NRI5 854 aa12.89□□□□□ -0.35
PUM1-202ENST00000373741 SAMSN1Q9NSI8 373 aaKnown RBP12.89□□□□□ -0.35
PUM1-202ENST00000373741 CSADQ9Y600 493 aa12.89□□□□□ -0.35
PUM1-202ENST00000373741 ADM5C9JUS6 153 aa12.89□□□□□ -0.35
PUM1-202ENST00000373741 PPP1R12BO60237 982 aaPredicted RBP12.89□□□□□ -0.35
PUM1-202ENST00000373741 KIF5CO60282 957 aa12.89□□□□□ -0.35
PUM1-202ENST00000373741 KIAA1755Q5JYT7 1200 aa12.89□□□□□ -0.35
PUM1-202ENST00000373741 SV2BQ7L1I2 683 aa12.89□□□□□ -0.35
PUM1-202ENST00000373741 TPH2Q8IWU9 490 aa12.89□□□□□ -0.35
PUM1-202ENST00000373741 SH2D3AQ9BRG2 576 aa12.89□□□□□ -0.35
PUM1-202ENST00000373741 EBAG9O00559 213 aa12.89□□□□□ -0.35
PUM1-202ENST00000373741 LDHDQ86WU2 507 aa12.89□□□□□ -0.35
PUM1-202ENST00000373741 SIAH1Q8IUQ4 282 aa12.89□□□□□ -0.35
PUM1-202ENST00000373741 OTUD5Q96G74 571 aa12.89□□□□□ -0.35
PUM1-202ENST00000373741 RPAP3Q9H6T3 665 aaPredicted RBP12.89□□□□□ -0.35
PUM1-202ENST00000373741 RIC8AQ9NPQ8 531 aa12.89□□□□□ -0.35
PUM1-202ENST00000373741 IMPACTQ9P2X3 320 aa12.89□□□□□ -0.35
PUM1-202ENST00000373741 MAGEC2Q9UBF1 373 aaPredicted RBP12.89□□□□□ -0.35
PUM1-202ENST00000373741 ATP8B1O43520 1251 aa12.89□□□□□ -0.35
PUM1-202ENST00000373741 IL17AQ16552 155 aa12.89□□□□□ -0.35
PUM1-202ENST00000373741 MOB2Q70IA6 237 aa12.89□□□□□ -0.35
PUM1-202ENST00000373741 NF2P35240 595 aa12.88□□□□□ -0.35
PUM1-202ENST00000373741 CDR1P51861 262 aa12.88□□□□□ -0.35
PUM1-202ENST00000373741 PABPC4Q13310 644 aaKnown RBP eCLIP12.88□□□□□ -0.353e-15■■■□□ 18.5
PUM1-202ENST00000373741 LRRC41Q15345 812 aa12.88□□□□□ -0.35
PUM1-202ENST00000373741 CAGE1Q8TC20 777 aa12.88□□□□□ -0.35
PUM1-202ENST00000373741 FAM212AQ96EL1 285 aa12.88□□□□□ -0.35
PUM1-202ENST00000373741 HPSEQ9Y251 543 aa12.88□□□□□ -0.35
PUM1-202ENST00000373741 A0A1B0GUL6 1792 aa12.88□□□□□ -0.35
PUM1-202ENST00000373741 COL11A2P13942 1736 aaPredicted RBP12.88□□□□□ -0.35
PUM1-202ENST00000373741 N4BP3O15049 544 aa12.88□□□□□ -0.35
PUM1-202ENST00000373741 PEX10O60683 326 aa12.88□□□□□ -0.35
PUM1-202ENST00000373741 FILIP1LQ4L180 1135 aa12.88□□□□□ -0.35
PUM1-202ENST00000373741 E4F1Q66K89 784 aaPredicted RBP12.88□□□□□ -0.35
PUM1-202ENST00000373741 MCTP2Q6DN12 878 aa12.88□□□□□ -0.35
PUM1-202ENST00000373741 NELFCDQ8IXH7 590 aa12.88□□□□□ -0.35
PUM1-202ENST00000373741 SYNRGQ9UMZ2 1314 aa12.88□□□□□ -0.35
PUM1-202ENST00000373741 RPN1P04843 607 aaKnown RBP12.88□□□□□ -0.35
PUM1-202ENST00000373741 NOP2P46087 812 aaKnown RBP12.88□□□□□ -0.35
PUM1-202ENST00000373741 AMPD3Q01432 767 aa12.88□□□□□ -0.35
PUM1-202ENST00000373741 DHX40Q8IX18 779 aaKnown RBP12.88□□□□□ -0.35
PUM1-202ENST00000373741 TNFRSF25Q93038 417 aa12.88□□□□□ -0.35
PUM1-202ENST00000373741 TMX2Q9Y320 296 aa12.88□□□□□ -0.35
PUM1-202ENST00000373741 ABCB11O95342 1321 aa12.88□□□□□ -0.35
PUM1-202ENST00000373741 ACTN4O43707 911 aaKnown RBP12.87□□□□□ -0.35
PUM1-202ENST00000373741 ZBED4O75132 1171 aa12.87□□□□□ -0.35
PUM1-202ENST00000373741 CCDC172P0C7W6 258 aa12.87□□□□□ -0.35
PUM1-202ENST00000373741 NT5C2P49902 561 aa12.87□□□□□ -0.35
PUM1-202ENST00000373741 CEP83Q9Y592 693 aa12.87□□□□□ -0.35
PUM1-202ENST00000373741 PCNTO95613 3336 aa12.87□□□□□ -0.35
PUM1-202ENST00000373741 PTGER2P43116 358 aa12.87□□□□□ -0.35
PUM1-202ENST00000373741 IQCB1Q15051 598 aa12.87□□□□□ -0.35
PUM1-202ENST00000373741 FAM83AQ86UY5 434 aa12.87□□□□□ -0.35
PUM1-202ENST00000373741 MRPL11Q9Y3B7 192 aaKnown RBP12.87□□□□□ -0.35
PUM1-202ENST00000373741 POTEB3A0JP26 581 aa12.87□□□□□ -0.35
PUM1-202ENST00000373741 TRIM49BA6NDI0 452 aa12.87□□□□□ -0.35
PUM1-202ENST00000373741 GOLGA6L9A6NEM1 432 aa12.87□□□□□ -0.35
PUM1-202ENST00000373741 POTECB2RU33 542 aa12.87□□□□□ -0.35
PUM1-202ENST00000373741 RPS12P25398 132 aaKnown RBP12.87□□□□□ -0.35
PUM1-202ENST00000373741 SUPT20HL1Q3ZLR7 823 aa12.87□□□□□ -0.35
PUM1-202ENST00000373741 RNF187Q5TA31 235 aaPredicted RBP12.87□□□□□ -0.35
PUM1-202ENST00000373741 ARL6IP4Q66PJ3 421 aaKnown RBP12.87□□□□□ -0.35
PUM1-202ENST00000373741 POTEBQ6S5H4 581 aa12.87□□□□□ -0.35
PUM1-202ENST00000373741 EEPD1Q7L9B9 569 aa12.87□□□□□ -0.35
PUM1-202ENST00000373741 ZNF579Q8NAF0 562 aaKnown RBP12.87□□□□□ -0.35
PUM1-202ENST00000373741 CXorf56Q9H5V9 222 aa12.87□□□□□ -0.35
PUM1-202ENST00000373741 CASZ1Q86V15 1759 aa12.87□□□□□ -0.35
PUM1-202ENST00000373741 IGKV6D-41A0A0C4DH26 115 aa12.86□□□□□ -0.35
PUM1-202ENST00000373741 POTEB2H3BUK9 544 aa12.86□□□□□ -0.35
PUM1-202ENST00000373741 FMR1Q06787 632 aaKnown RBP eCLIP12.86□□□□□ -0.351e-12■■■□□ 16.5
PUM1-202ENST00000373741 PPFIBP1Q86W92 1011 aa12.86□□□□□ -0.35
PUM1-202ENST00000373741 MLKLQ8NB16 471 aa12.86□□□□□ -0.35
PUM1-202ENST00000373741 SLF1Q9BQI6 1058 aa12.86□□□□□ -0.35
PUM1-202ENST00000373741 ELP3Q9H9T3 547 aa12.86□□□□□ -0.35
PUM1-202ENST00000373741 GPRC5DQ9NZD1 345 aa12.86□□□□□ -0.35
PUM1-202ENST00000373741 E9PMD0 336 aa12.86□□□□□ -0.35
PUM1-202ENST00000373741 GAS7O60861 476 aa12.86□□□□□ -0.35
PUM1-202ENST00000373741 MMS22LQ6ZRQ5 1243 aa12.86□□□□□ -0.35
PUM1-202ENST00000373741 NELFBQ8WX92 580 aa12.86□□□□□ -0.35
PUM1-202ENST00000373741 CNKSR2Q8WXI2 1034 aa12.86□□□□□ -0.35
PUM1-202ENST00000373741 ATG4CQ96DT6 458 aa12.86□□□□□ -0.35
PUM1-202ENST00000373741 ADAMTSL1Q8N6G6 1762 aa12.86□□□□□ -0.35
PUM1-202ENST00000373741 POTEFA5A3E0 1075 aa12.86□□□□□ -0.35
PUM1-202ENST00000373741 PSMA7O14818 248 aa12.86□□□□□ -0.35
PUM1-202ENST00000373741 POTEIP0CG38 1075 aa12.86□□□□□ -0.35
PUM1-202ENST00000373741 ENOX2Q16206 610 aaKnown RBP12.86□□□□□ -0.35
PUM1-202ENST00000373741 HERC4Q5GLZ8 1057 aaPredicted RBP12.86□□□□□ -0.35
PUM1-202ENST00000373741 CCDC70Q6NSX1 233 aa12.86□□□□□ -0.35
PUM1-202ENST00000373741 POTEGQ6S5H5 508 aa12.86□□□□□ -0.35
PUM1-202ENST00000373741 POTEEQ6S8J3 1075 aa12.86□□□□□ -0.35
PUM1-202ENST00000373741 PACS2Q86VP3 889 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms