RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 AS3MTQ9HBK9 375 aa15.43■□□□□ 0.06
LMX1B-202ENST00000373474 TMEM232C9JQI7 657 aa15.43■□□□□ 0.06
LMX1B-202ENST00000373474 PGRMC1O00264 195 aaKnown RBP15.43■□□□□ 0.06
LMX1B-202ENST00000373474 LRRC41Q15345 812 aa15.43■□□□□ 0.06
LMX1B-202ENST00000373474 AOC3Q16853 763 aa15.43■□□□□ 0.06
LMX1B-202ENST00000373474 NLRP10Q86W26 655 aa15.43■□□□□ 0.06
LMX1B-202ENST00000373474 PGBD1Q96JS3 809 aa15.43■□□□□ 0.06
LMX1B-202ENST00000373474 SPZ1Q9BXG8 430 aa15.43■□□□□ 0.06
LMX1B-202ENST00000373474 TAF12Q16514 161 aa15.43■□□□□ 0.06
LMX1B-202ENST00000373474 UHMK1Q8TAS1 419 aaKnown RBP15.43■□□□□ 0.06
LMX1B-202ENST00000373474 BAG5Q9UL15 447 aa15.43■□□□□ 0.06
LMX1B-202ENST00000373474 THRAP3Q9Y2W1 955 aaKnown RBP15.43■□□□□ 0.06
LMX1B-202ENST00000373474 ATP1A3P13637 1013 aa15.43■□□□□ 0.06
LMX1B-202ENST00000373474 IL9RQ01113 521 aa15.43■□□□□ 0.06
LMX1B-202ENST00000373474 TMED1Q13445 227 aa15.43■□□□□ 0.06
LMX1B-202ENST00000373474 ARL6IP4Q66PJ3 421 aaKnown RBP15.43■□□□□ 0.06
LMX1B-202ENST00000373474 N4BP2L2Q92802 583 aaPredicted RBP15.43■□□□□ 0.06
LMX1B-202ENST00000373474 AIFM3Q96NN9 605 aa15.43■□□□□ 0.06
LMX1B-202ENST00000373474 AMNQ9BXJ7 453 aa15.43■□□□□ 0.06
LMX1B-202ENST00000373474 SEC31BQ9NQW1 1179 aa15.43■□□□□ 0.06
LMX1B-202ENST00000373474 SH3GLB2Q9NR46 395 aa15.43■□□□□ 0.06
LMX1B-202ENST00000373474 STK36Q9NRP7 1315 aa15.42■□□□□ 0.06
LMX1B-202ENST00000373474 H7C1W4 665 aa15.42■□□□□ 0.06
LMX1B-202ENST00000373474 PIK3CAP42336 1068 aa15.42■□□□□ 0.06
LMX1B-202ENST00000373474 VPS41P49754 854 aa15.42■□□□□ 0.06
LMX1B-202ENST00000373474 PPP2R5DQ14738 602 aa15.42■□□□□ 0.06
LMX1B-202ENST00000373474 TAF11Q15544 211 aa15.42■□□□□ 0.06
LMX1B-202ENST00000373474 ALS2CLQ60I27 953 aa15.42■□□□□ 0.06
LMX1B-202ENST00000373474 WDR19Q8NEZ3 1342 aa15.42■□□□□ 0.06
LMX1B-202ENST00000373474 LOC102724428A0A0B4J2F2 783 aa15.42■□□□□ 0.06
LMX1B-202ENST00000373474 ALAS1P13196 640 aa15.42■□□□□ 0.06
LMX1B-202ENST00000373474 EIF4A3P38919 411 aaKnown RBP15.42■□□□□ 0.06
LMX1B-202ENST00000373474 NSFP46459 744 aaKnown RBP15.42■□□□□ 0.06
LMX1B-202ENST00000373474 SIK1P57059 783 aa15.42■□□□□ 0.06
LMX1B-202ENST00000373474 CYP4A11Q02928 519 aa15.42■□□□□ 0.06
LMX1B-202ENST00000373474 ODR4Q5SWX8 454 aa15.42■□□□□ 0.06
LMX1B-202ENST00000373474 ZBTB8OSQ8IWT0 167 aa15.42■□□□□ 0.06
LMX1B-202ENST00000373474 PIGSQ96S52 555 aa15.42■□□□□ 0.06
LMX1B-202ENST00000373474 ERVV-1B6SEH8 477 aa15.42■□□□□ 0.06
LMX1B-202ENST00000373474 FKBP3Q00688 224 aaKnown RBP15.42■□□□□ 0.06
LMX1B-202ENST00000373474 LMNB2Q03252 620 aa15.42■□□□□ 0.06
LMX1B-202ENST00000373474 BFSP1Q12934 665 aa15.42■□□□□ 0.06
LMX1B-202ENST00000373474 KRT31Q15323 416 aa15.42■□□□□ 0.06
LMX1B-202ENST00000373474 USPL1Q5W0Q7 1092 aa15.42■□□□□ 0.06
LMX1B-202ENST00000373474 NIM1KQ8IY84 436 aa15.42■□□□□ 0.06
LMX1B-202ENST00000373474 ALDH8A1Q9H2A2 487 aaPredicted RBP15.42■□□□□ 0.06
LMX1B-202ENST00000373474 PNMA2Q9UL42 364 aa15.42■□□□□ 0.06
LMX1B-202ENST00000373474 PTPN22Q9Y2R2 807 aa15.42■□□□□ 0.06
LMX1B-202ENST00000373474 PPIP5K2O43314 1243 aa15.42■□□□□ 0.06
LMX1B-202ENST00000373474 DLATP10515 647 aaKnown RBP15.42■□□□□ 0.06
LMX1B-202ENST00000373474 MESDQ14696 234 aa15.42■□□□□ 0.06
LMX1B-202ENST00000373474 ABCB5Q2M3G0 1257 aa15.42■□□□□ 0.06
LMX1B-202ENST00000373474 PDCD7Q8N8D1 485 aaKnown RBP15.42■□□□□ 0.06
LMX1B-202ENST00000373474 CCDC17Q96LX7 622 aa15.42■□□□□ 0.06
LMX1B-202ENST00000373474 TSC22D3Q99576 134 aa15.42■□□□□ 0.06
LMX1B-202ENST00000373474 INTS9Q9NV88 658 aaKnown RBP15.42■□□□□ 0.06
LMX1B-202ENST00000373474 EPS15L1Q9UBC2 864 aa15.42■□□□□ 0.06
LMX1B-202ENST00000373474 ANGPTL2Q9UKU9 493 aa15.42■□□□□ 0.06
LMX1B-202ENST00000373474 ZBTB1Q9Y2K1 713 aa15.42■□□□□ 0.06
LMX1B-202ENST00000373474 MAP3K7O43318 606 aa15.41■□□□□ 0.06
LMX1B-202ENST00000373474 IFT88Q13099 833 aa15.41■□□□□ 0.06
LMX1B-202ENST00000373474 PABPC4Q13310 644 aaKnown RBP eCLIP15.41■□□□□ 0.06
LMX1B-202ENST00000373474 BRDTQ58F21 947 aaPredicted RBP15.41■□□□□ 0.06
LMX1B-202ENST00000373474 FAM133AQ8N9E0 248 aa15.41■□□□□ 0.06
LMX1B-202ENST00000373474 SPDL1Q96EA4 605 aa15.41■□□□□ 0.06
LMX1B-202ENST00000373474 TRIM11Q96F44 468 aa15.41■□□□□ 0.06
LMX1B-202ENST00000373474 TXLNGQ9NUQ3 528 aa15.41■□□□□ 0.06
LMX1B-202ENST00000373474 PLCG1P19174 1290 aa15.41■□□□□ 0.06
LMX1B-202ENST00000373474 POLE2P56282 527 aa15.41■□□□□ 0.06
LMX1B-202ENST00000373474 FAM186BQ8IYM0 893 aa15.41■□□□□ 0.06
LMX1B-202ENST00000373474 ABCB6Q9NP58 842 aa15.41■□□□□ 0.06
LMX1B-202ENST00000373474 DAAM1Q9Y4D1 1078 aa15.41■□□□□ 0.06
LMX1B-202ENST00000373474 BPIFB4P59827 614 aa15.41■□□□□ 0.06
LMX1B-202ENST00000373474 DYNC1I2Q13409 638 aaKnown RBP15.41■□□□□ 0.06
LMX1B-202ENST00000373474 ARID5BQ14865 1188 aa15.41■□□□□ 0.06
LMX1B-202ENST00000373474 TOGARAM2Q6ZUX3 1019 aa15.41■□□□□ 0.06
LMX1B-202ENST00000373474 TRIM42Q8IWZ5 723 aa15.41■□□□□ 0.06
LMX1B-202ENST00000373474 ZNF579Q8NAF0 562 aaKnown RBP15.41■□□□□ 0.06
LMX1B-202ENST00000373474 SEPT8Q92599 483 aa15.41■□□□□ 0.06
LMX1B-202ENST00000373474 MAGOHBQ96A72 148 aaKnown RBP15.41■□□□□ 0.06
LMX1B-202ENST00000373474 MRPL46Q9H2W6 279 aaKnown RBP15.41■□□□□ 0.06
LMX1B-202ENST00000373474 LRRC7Q96NW7 1537 aa15.41■□□□□ 0.06
LMX1B-202ENST00000373474 CASP8Q14790 479 aa15.41■□□□□ 0.06
LMX1B-202ENST00000373474 REREQ9P2R6 1566 aa15.41■□□□□ 0.06
LMX1B-202ENST00000373474 EIF3CLB5ME19 914 aaKnown RBP15.4■□□□□ 0.06
LMX1B-202ENST00000373474 FTCDO95954 541 aa15.4■□□□□ 0.06
LMX1B-202ENST00000373474 DOK7Q18PE1 504 aa15.4■□□□□ 0.06
LMX1B-202ENST00000373474 ERFEQ4G0M1 354 aa15.4■□□□□ 0.06
LMX1B-202ENST00000373474 NT5C1BQ96P26 610 aa15.4■□□□□ 0.06
LMX1B-202ENST00000373474 EIF3CQ99613 913 aaKnown RBP15.4■□□□□ 0.06
LMX1B-202ENST00000373474 ERBB3P21860 1342 aa15.4■□□□□ 0.06
LMX1B-202ENST00000373474 PNMA6AP0CW24 399 aaPredicted RBP15.4■□□□□ 0.06
LMX1B-202ENST00000373474 PTK2Q05397 1052 aa15.4■□□□□ 0.06
LMX1B-202ENST00000373474 ST13P4Q8IZP2 240 aaPredicted RBP15.4■□□□□ 0.06
LMX1B-202ENST00000373474 ST7Q9NRC1 585 aa15.4■□□□□ 0.06
LMX1B-202ENST00000373474 DISC1Q9NRI5 854 aa15.4■□□□□ 0.06
LMX1B-202ENST00000373474 CXCR5P32302 372 aa15.4■□□□□ 0.06
LMX1B-202ENST00000373474 KIF11P52732 1056 aa15.4■□□□□ 0.06
LMX1B-202ENST00000373474 NNTQ13423 1086 aa15.4■□□□□ 0.06
LMX1B-202ENST00000373474 NSMCE1Q8WV22 266 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms