RNA–Protein interactions for RNA: ENST00000372858.7

PABPC4-203, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 2,753 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-203ENST00000372858 OTUD6BQ8N6M0 293 aa18.29■□□□□ 0.52
PABPC4-203ENST00000372858 LINC00116Q8NCU8 138 aa18.29■□□□□ 0.52
PABPC4-203ENST00000372858 CEP89Q96ST8 783 aa18.29■□□□□ 0.52
PABPC4-203ENST00000372858 ZNF233A6NK53 670 aa18.28■□□□□ 0.52
PABPC4-203ENST00000372858 RASA1P20936 1047 aa18.28■□□□□ 0.52
PABPC4-203ENST00000372858 DNA2P51530 1060 aa18.28■□□□□ 0.52
PABPC4-203ENST00000372858 SWT1Q5T5J6 900 aaKnown RBP18.28■□□□□ 0.52
PABPC4-203ENST00000372858 KDM7AQ6ZMT4 941 aa18.28■□□□□ 0.52
PABPC4-203ENST00000372858 SPATS2Q86XZ4 545 aaKnown RBP18.28■□□□□ 0.52
PABPC4-203ENST00000372858 RNPC3Q96LT9 517 aaKnown RBP18.28■□□□□ 0.52
PABPC4-203ENST00000372858 MYH1P12882 1939 aa18.28■□□□□ 0.52
PABPC4-203ENST00000372858 USP8P40818 1118 aa18.28■□□□□ 0.52
PABPC4-203ENST00000372858 KCNQ4P56696 695 aa18.28■□□□□ 0.52
PABPC4-203ENST00000372858 SLC9C1Q4G0N8 1177 aa18.28■□□□□ 0.52
PABPC4-203ENST00000372858 HGSNATQ68CP4 663 aa18.28■□□□□ 0.52
PABPC4-203ENST00000372858 MAPKAPK5Q8IW41 473 aa18.28■□□□□ 0.52
PABPC4-203ENST00000372858 REXO1Q8N1G1 1221 aaKnown RBP18.28■□□□□ 0.52
PABPC4-203ENST00000372858 ROBO3Q96MS0 1386 aa18.28■□□□□ 0.52
PABPC4-203ENST00000372858 NLRC4Q9NPP4 1024 aa18.28■□□□□ 0.52
PABPC4-203ENST00000372858 LUC7LQ9NQ29 371 aaKnown RBP18.28■□□□□ 0.52
PABPC4-203ENST00000372858 BLOC1S4Q9NUP1 217 aa18.28■□□□□ 0.52
PABPC4-203ENST00000372858 ANKIB1Q9P2G1 1089 aa18.28■□□□□ 0.52
PABPC4-203ENST00000372858 ZSCAN5CA6NGD5 496 aaPredicted RBP18.27■□□□□ 0.52
PABPC4-203ENST00000372858 PALMO75781 387 aa18.27■□□□□ 0.52
PABPC4-203ENST00000372858 LSP1P33241 339 aa18.27■□□□□ 0.52
PABPC4-203ENST00000372858 GUCY2FP51841 1108 aa18.27■□□□□ 0.52
PABPC4-203ENST00000372858 GRB10Q13322 594 aa18.27■□□□□ 0.52
PABPC4-203ENST00000372858 USP17L2Q6R6M4 530 aa18.27■□□□□ 0.52
PABPC4-203ENST00000372858 SMIM5Q71RC9 77 aa18.27■□□□□ 0.52
PABPC4-203ENST00000372858 TMC4Q7Z404 712 aa18.27■□□□□ 0.52
PABPC4-203ENST00000372858 BIN2Q9UBW5 565 aaPredicted RBP18.27■□□□□ 0.52
PABPC4-203ENST00000372858 STK17AQ9UEE5 414 aa18.27■□□□□ 0.52
PABPC4-203ENST00000372858 CAPN7Q9Y6W3 813 aa18.27■□□□□ 0.52
PABPC4-203ENST00000372858 CLSTN1O94985 981 aa18.27■□□□□ 0.51
PABPC4-203ENST00000372858 LDHCP07864 332 aa18.27■□□□□ 0.51
PABPC4-203ENST00000372858 MNAT1P51948 309 aa18.27■□□□□ 0.51
PABPC4-203ENST00000372858 TPTE2Q6XPS3 522 aa18.27■□□□□ 0.51
PABPC4-203ENST00000372858 LARP4BQ92615 738 aaKnown RBP18.27■□□□□ 0.51
PABPC4-203ENST00000372858 EYA3Q99504 573 aa18.27■□□□□ 0.51
PABPC4-203ENST00000372858 TSG101Q99816 390 aa18.27■□□□□ 0.51
PABPC4-203ENST00000372858 EPN3Q9H201 632 aa18.27■□□□□ 0.51
PABPC4-203ENST00000372858 RBAK-RBAKDNI3L0D1 243 aa18.26■□□□□ 0.51
PABPC4-203ENST00000372858 MEFVO15553 781 aaPredicted RBP18.26■□□□□ 0.51
PABPC4-203ENST00000372858 ZPR1O75312 459 aa18.26■□□□□ 0.51
PABPC4-203ENST00000372858 GUCY1A3Q02108 690 aa18.26■□□□□ 0.51
PABPC4-203ENST00000372858 LRRC55Q6ZSA7 311 aa18.26■□□□□ 0.51
PABPC4-203ENST00000372858 MREGQ8N565 214 aa18.26■□□□□ 0.51
PABPC4-203ENST00000372858 KRT12Q99456 494 aa18.26■□□□□ 0.51
PABPC4-203ENST00000372858 ATXN2Q99700 1313 aaKnown RBP18.26■□□□□ 0.51
PABPC4-203ENST00000372858 FTCDO95954 541 aa18.26■□□□□ 0.51
PABPC4-203ENST00000372858 KCNMA1Q12791 1236 aa18.26■□□□□ 0.51
PABPC4-203ENST00000372858 TMEM266Q2M3C6 531 aa18.26■□□□□ 0.51
PABPC4-203ENST00000372858 SFMBT2Q5VUG0 894 aa18.26■□□□□ 0.51
PABPC4-203ENST00000372858 MICALCLQ6ZW33 695 aa18.26■□□□□ 0.51
PABPC4-203ENST00000372858 CD302Q8IX05 232 aa18.26■□□□□ 0.51
PABPC4-203ENST00000372858 NUCKS1Q9H1E3 243 aaKnown RBP18.26■□□□□ 0.51
PABPC4-203ENST00000372858 POLD4Q9HCU8 107 aa18.26■□□□□ 0.51
PABPC4-203ENST00000372858 GRID2IPA4D2P6 1211 aa18.25■□□□□ 0.51
PABPC4-203ENST00000372858 H0YHG0 523 aa18.25■□□□□ 0.51
PABPC4-203ENST00000372858 SERPING1P05155 500 aa18.25■□□□□ 0.51
PABPC4-203ENST00000372858 NR1D1P20393 614 aa18.25■□□□□ 0.51
PABPC4-203ENST00000372858 PPP4CP60510 307 aa18.25■□□□□ 0.51
PABPC4-203ENST00000372858 ORC2Q13416 577 aaPredicted RBP18.25■□□□□ 0.51
PABPC4-203ENST00000372858 CALCRLQ16602 461 aa18.25■□□□□ 0.51
PABPC4-203ENST00000372858 ARHGAP27Q6ZUM4 889 aa18.25■□□□□ 0.51
PABPC4-203ENST00000372858 PIGSQ96S52 555 aa18.25■□□□□ 0.51
PABPC4-203ENST00000372858 RAB34Q9BZG1 259 aa18.25■□□□□ 0.51
PABPC4-203ENST00000372858 RIC8AQ9NPQ8 531 aa18.25■□□□□ 0.51
PABPC4-203ENST00000372858 GEMIN8Q9NWZ8 242 aaKnown RBP18.25■□□□□ 0.51
PABPC4-203ENST00000372858 NAB2Q15742 525 aa18.25■□□□□ 0.51
PABPC4-203ENST00000372858 EMC10Q5UCC4 262 aa18.25■□□□□ 0.51
PABPC4-203ENST00000372858 WHAMMQ8TF30 809 aa18.25■□□□□ 0.51
PABPC4-203ENST00000372858 CASKIN2Q8WXE0 1202 aa18.25■□□□□ 0.51
PABPC4-203ENST00000372858 PIK3R5Q8WYR1 880 aa18.25■□□□□ 0.51
PABPC4-203ENST00000372858 PNMA5Q96PV4 448 aa18.25■□□□□ 0.51
PABPC4-203ENST00000372858 CEP72Q9P209 647 aa18.25■□□□□ 0.51
PABPC4-203ENST00000372858 MAST2Q6P0Q8 1798 aa18.25■□□□□ 0.51
PABPC4-203ENST00000372858 RNASE9P60153 205 aaKnown RBP18.25■□□□□ 0.51
PABPC4-203ENST00000372858 LRRC41Q15345 812 aa18.25■□□□□ 0.51
PABPC4-203ENST00000372858 FAM83BQ5T0W9 1011 aa18.25■□□□□ 0.51
PABPC4-203ENST00000372858 KCNV1Q6PIU1 500 aa18.25■□□□□ 0.51
PABPC4-203ENST00000372858 CNPY4Q8N129 248 aa18.25■□□□□ 0.51
PABPC4-203ENST00000372858 NCAPGQ9BPX3 1015 aa18.25■□□□□ 0.51
PABPC4-203ENST00000372858 PPP1R37O75864 691 aa18.24■□□□□ 0.51
PABPC4-203ENST00000372858 CDK8P49336 464 aa18.24■□□□□ 0.51
PABPC4-203ENST00000372858 CDC37Q16543 378 aaPredicted RBP18.24■□□□□ 0.51
PABPC4-203ENST00000372858 NAA35Q5VZE5 725 aa18.24■□□□□ 0.51
PABPC4-203ENST00000372858 PRPF38AQ8NAV1 312 aaKnown RBP18.24■□□□□ 0.51
PABPC4-203ENST00000372858 SYN2Q92777 582 aaPredicted RBP18.24■□□□□ 0.51
PABPC4-203ENST00000372858 ATP6V1G3Q96LB4 118 aa18.24■□□□□ 0.51
PABPC4-203ENST00000372858 SRP68Q9UHB9 627 aaKnown RBP18.24■□□□□ 0.51
PABPC4-203ENST00000372858 WNK3Q9BYP7 1800 aa18.24■□□□□ 0.51
PABPC4-203ENST00000372858 TLR2O60603 784 aa18.24■□□□□ 0.51
PABPC4-203ENST00000372858 KLRC1P26715 233 aa18.24■□□□□ 0.51
PABPC4-203ENST00000372858 EHHADHQ08426 723 aa18.24■□□□□ 0.51
PABPC4-203ENST00000372858 CCDC40Q4G0X9 1142 aa18.24■□□□□ 0.51
PABPC4-203ENST00000372858 NEDD1Q8NHV4 660 aa18.24■□□□□ 0.51
PABPC4-203ENST00000372858 TMEM260Q9NX78 707 aa18.24■□□□□ 0.51
PABPC4-203ENST00000372858 NARFQ9UHQ1 456 aa18.24■□□□□ 0.51
PABPC4-203ENST00000372858 PSMD2Q13200 908 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms