RNA–Protein interactions for RNA: ENST00000372547.5

SNX21-205, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 2,794 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-205ENST00000372547 HNRNPH3P31942 346 aaKnown RBP13.18□□□□□ -0.3
SNX21-205ENST00000372547 NAPAP54920 295 aa13.18□□□□□ -0.3
SNX21-205ENST00000372547 CDC37Q16543 378 aaPredicted RBP13.18□□□□□ -0.3
SNX21-205ENST00000372547 USP17L1Q7RTZ2 530 aa13.18□□□□□ -0.3
SNX21-205ENST00000372547 DYNLL2Q96FJ2 89 aa13.18□□□□□ -0.3
SNX21-205ENST00000372547 DDX47Q9H0S4 455 aaKnown RBP13.18□□□□□ -0.3
SNX21-205ENST00000372547 TAF1DQ9H5J8 278 aaPredicted RBP13.18□□□□□ -0.3
SNX21-205ENST00000372547 TSKSQ9UJT2 592 aa13.18□□□□□ -0.3
SNX21-205ENST00000372547 FLT1P17948 1338 aa13.18□□□□□ -0.3
SNX21-205ENST00000372547 COL18A1P39060 1754 aa13.18□□□□□ -0.3
SNX21-205ENST00000372547 TRAF5O00463 557 aa13.17□□□□□ -0.3
SNX21-205ENST00000372547 PPP1R12BO60237 982 aaPredicted RBP13.17□□□□□ -0.3
SNX21-205ENST00000372547 RASSF9O75901 435 aa13.17□□□□□ -0.3
SNX21-205ENST00000372547 USP17L8P0C7I0 530 aa13.17□□□□□ -0.3
SNX21-205ENST00000372547 FLT3P36888 993 aa13.17□□□□□ -0.3
SNX21-205ENST00000372547 CCDC152Q4G0S7 254 aa13.17□□□□□ -0.3
SNX21-205ENST00000372547 HGSNATQ68CP4 663 aa13.17□□□□□ -0.3
SNX21-205ENST00000372547 YTHDF3Q7Z739 585 aaKnown RBP13.17□□□□□ -0.3
SNX21-205ENST00000372547 ARFGAP2Q8N6H7 521 aa13.17□□□□□ -0.3
SNX21-205ENST00000372547 MDM1Q8TC05 714 aa13.17□□□□□ -0.3
SNX21-205ENST00000372547 SLC4A9Q96Q91 983 aa13.17□□□□□ -0.3
SNX21-205ENST00000372547 VEZTQ9HBM0 779 aa13.17□□□□□ -0.3
SNX21-205ENST00000372547 A0A087X0T9 212 aa13.17□□□□□ -0.3
SNX21-205ENST00000372547 MYMKA6NI61 221 aa13.17□□□□□ -0.3
SNX21-205ENST00000372547 SMIM23A6NLE4 172 aa13.17□□□□□ -0.3
SNX21-205ENST00000372547 LCA5LO95447 670 aa13.17□□□□□ -0.3
SNX21-205ENST00000372547 FAM228BP0C875 321 aa13.17□□□□□ -0.3
SNX21-205ENST00000372547 CYP19A1P11511 503 aaPredicted RBP13.17□□□□□ -0.3
SNX21-205ENST00000372547 FAM83BQ5T0W9 1011 aa13.17□□□□□ -0.3
SNX21-205ENST00000372547 RCSD1Q6JBY9 416 aa13.17□□□□□ -0.3
SNX21-205ENST00000372547 CHADLQ6NUI6 762 aa13.17□□□□□ -0.3
SNX21-205ENST00000372547 NELFCDQ8IXH7 590 aa13.17□□□□□ -0.3
SNX21-205ENST00000372547 CACNA2D3Q8IZS8 1091 aa13.17□□□□□ -0.3
SNX21-205ENST00000372547 ZNF384Q8TF68 577 aa13.17□□□□□ -0.3
SNX21-205ENST00000372547 SEC16BQ96JE7 1060 aa13.17□□□□□ -0.3
SNX21-205ENST00000372547 BRIP1Q9BX63 1249 aa13.17□□□□□ -0.3
SNX21-205ENST00000372547 DPH5Q9H2P9 285 aa13.17□□□□□ -0.3
SNX21-205ENST00000372547 DCP1AQ9NPI6 582 aaPredicted RBP13.17□□□□□ -0.3
SNX21-205ENST00000372547 CNOT8Q9UFF9 292 aaKnown RBP13.17□□□□□ -0.3
SNX21-205ENST00000372547 FBXL5Q9UKA1 691 aa13.17□□□□□ -0.3
SNX21-205ENST00000372547 ATXN2Q99700 1313 aaKnown RBP13.17□□□□□ -0.3
SNX21-205ENST00000372547 PJA2O43164 708 aa13.16□□□□□ -0.3
SNX21-205ENST00000372547 TLR2O60603 784 aa13.16□□□□□ -0.3
SNX21-205ENST00000372547 MAGOHP61326 146 aaKnown RBP13.16□□□□□ -0.3
SNX21-205ENST00000372547 KCNMA1Q12791 1236 aa13.16□□□□□ -0.3
SNX21-205ENST00000372547 KRT71Q3SY84 523 aa13.16□□□□□ -0.3
SNX21-205ENST00000372547 CENPPQ6IPU0 288 aa13.16□□□□□ -0.3
SNX21-205ENST00000372547 FUKQ8N0W3 1084 aa13.16□□□□□ -0.3
SNX21-205ENST00000372547 USP38Q8NB14 1042 aa13.16□□□□□ -0.3
SNX21-205ENST00000372547 MAGOHBQ96A72 148 aaKnown RBP13.16□□□□□ -0.3
SNX21-205ENST00000372547 C7orf25Q9BPX7 421 aa13.16□□□□□ -0.3
SNX21-205ENST00000372547 NEUROG2Q9H2A3 272 aa13.16□□□□□ -0.3
SNX21-205ENST00000372547 BIN2Q9UBW5 565 aaPredicted RBP13.16□□□□□ -0.3
SNX21-205ENST00000372547 BAIAP2L1Q9UHR4 511 aa13.16□□□□□ -0.3
SNX21-205ENST00000372547 MCM8Q9UJA3 840 aa13.16□□□□□ -0.3
SNX21-205ENST00000372547 LEMD3Q9Y2U8 911 aa13.16□□□□□ -0.3
SNX21-205ENST00000372547 EPS15P42566 896 aa13.16□□□□□ -0.3
SNX21-205ENST00000372547 ZNF844Q08AG5 666 aa13.16□□□□□ -0.3
SNX21-205ENST00000372547 IFFO1Q0D2I5 559 aa13.16□□□□□ -0.3
SNX21-205ENST00000372547 KLHL30Q0D2K2 578 aa13.16□□□□□ -0.3
SNX21-205ENST00000372547 NKX1-1Q15270 411 aaPredicted RBP13.16□□□□□ -0.3
SNX21-205ENST00000372547 RPS6KA1Q15418 735 aa13.16□□□□□ -0.3
SNX21-205ENST00000372547 UAP1Q16222 522 aaPredicted RBP13.16□□□□□ -0.3
SNX21-205ENST00000372547 PREPLQ4J6C6 727 aaPredicted RBP13.16□□□□□ -0.3
SNX21-205ENST00000372547 RNF10Q8N5U6 811 aaKnown RBP13.16□□□□□ -0.3
SNX21-205ENST00000372547 MKNK2Q9HBH9 465 aa13.16□□□□□ -0.3
SNX21-205ENST00000372547 LUC7LQ9NQ29 371 aaKnown RBP13.16□□□□□ -0.3
SNX21-205ENST00000372547 TPX2Q9ULW0 747 aaKnown RBP13.16□□□□□ -0.3
SNX21-205ENST00000372547 DUOX1Q9NRD9 1551 aa13.16□□□□□ -0.3
SNX21-205ENST00000372547 DAPK3O43293 454 aa13.15□□□□□ -0.3
SNX21-205ENST00000372547 CYTH3O43739 400 aa13.15□□□□□ -0.3
SNX21-205ENST00000372547 EZRP15311 586 aaKnown RBP13.15□□□□□ -0.3
SNX21-205ENST00000372547 CLNS1AP54105 237 aaKnown RBP13.15□□□□□ -0.3
SNX21-205ENST00000372547 NAB2Q15742 525 aa13.15□□□□□ -0.3
SNX21-205ENST00000372547 ASTE1Q2TB18 679 aaPredicted RBP13.15□□□□□ -0.3
SNX21-205ENST00000372547 CAVIN4Q5BKX8 364 aa13.15□□□□□ -0.3
SNX21-205ENST00000372547 ANKRD20A8PQ5CZ79 823 aa13.15□□□□□ -0.3
SNX21-205ENST00000372547 MEI1Q5TIA1 1274 aa13.15□□□□□ -0.3
SNX21-205ENST00000372547 PPP4R3AQ6IN85 833 aa13.15□□□□□ -0.3
SNX21-205ENST00000372547 ADAT2Q7Z6V5 191 aaKnown RBP13.15□□□□□ -0.3
SNX21-205ENST00000372547 RAPGEF5Q92565 580 aa13.15□□□□□ -0.3
SNX21-205ENST00000372547 CRNKL1Q9BZJ0 848 aaKnown RBP13.15□□□□□ -0.3
SNX21-205ENST00000372547 LRRC4CQ9HCJ2 640 aa13.15□□□□□ -0.3
SNX21-205ENST00000372547 GOPCQ9HD26 462 aa13.15□□□□□ -0.3
SNX21-205ENST00000372547 BTG4Q9NY30 223 aa13.15□□□□□ -0.3
SNX21-205ENST00000372547 AMACRQ9UHK6 382 aa13.15□□□□□ -0.3
SNX21-205ENST00000372547 GRID2IPA4D2P6 1211 aa13.15□□□□□ -0.3
SNX21-205ENST00000372547 POTEMA6NI47 508 aa13.15□□□□□ -0.3
SNX21-205ENST00000372547 CHRM1P11229 460 aaPredicted RBP13.15□□□□□ -0.3
SNX21-205ENST00000372547 HSPA9P38646 679 aaKnown RBP13.15□□□□□ -0.3
SNX21-205ENST00000372547 CACNB1Q02641 598 aaPredicted RBP13.15□□□□□ -0.3
SNX21-205ENST00000372547 MECOMQ03112 1051 aa13.15□□□□□ -0.3
SNX21-205ENST00000372547 PPP1R7Q15435 360 aa13.15□□□□□ -0.3
SNX21-205ENST00000372547 TMED8Q6PL24 325 aaPredicted RBP13.15□□□□□ -0.3
SNX21-205ENST00000372547 C6orf89Q6UWU4 347 aa13.15□□□□□ -0.3
SNX21-205ENST00000372547 FAM228AQ86W67 206 aa13.15□□□□□ -0.3
SNX21-205ENST00000372547 CD302Q8IX05 232 aa13.15□□□□□ -0.3
SNX21-205ENST00000372547 MREGQ8N565 214 aa13.15□□□□□ -0.3
SNX21-205ENST00000372547 INPP4AQ96PE3 977 aaPredicted RBP13.15□□□□□ -0.3
SNX21-205ENST00000372547 TSG101Q99816 390 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms