RNA–Protein interactions for RNA: ENST00000372541.1

SNX21-203, Transcript of sorting nexin family member 21, humanhuman

TSL 2 BASIC

Gene SNX21, Length 771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-203ENST00000372541 COL25A1Q9BXS0 654 aaPredicted RBP17.16■□□□□ 0.34
SNX21-203ENST00000372541 ANO3Q9BYT9 981 aa17.16■□□□□ 0.34
SNX21-203ENST00000372541 GH1P01241 217 aa17.15■□□□□ 0.34
SNX21-203ENST00000372541 ATN1P54259 1190 aaPredicted RBP17.15■□□□□ 0.34
SNX21-203ENST00000372541 NLRP5P59047 1200 aa17.15■□□□□ 0.34
SNX21-203ENST00000372541 BRDTQ58F21 947 aaPredicted RBP17.15■□□□□ 0.34
SNX21-203ENST00000372541 MCTP2Q6DN12 878 aa17.15■□□□□ 0.34
SNX21-203ENST00000372541 FAM109BQ6ICB4 259 aaPredicted RBP17.15■□□□□ 0.34
SNX21-203ENST00000372541 CCDC62Q6P9F0 684 aa17.15■□□□□ 0.34
SNX21-203ENST00000372541 FAM177A1Q8N128 213 aaPredicted RBP17.15■□□□□ 0.34
SNX21-203ENST00000372541 WASF1Q92558 559 aa17.15■□□□□ 0.34
SNX21-203ENST00000372541 COPS5Q92905 334 aa17.15■□□□□ 0.34
SNX21-203ENST00000372541 PGBD1Q96JS3 809 aa17.15■□□□□ 0.34
SNX21-203ENST00000372541 ZSCAN31Q96LW9 406 aaPredicted RBP17.15■□□□□ 0.34
SNX21-203ENST00000372541 TMEM260Q9NX78 707 aa17.15■□□□□ 0.34
SNX21-203ENST00000372541 DDX41Q9UJV9 622 aaKnown RBP17.15■□□□□ 0.34
SNX21-203ENST00000372541 VCANP13611 3396 aa17.15■□□□□ 0.34
SNX21-203ENST00000372541 CTDNEP1O95476 244 aa17.14■□□□□ 0.33
SNX21-203ENST00000372541 XBP1P17861 261 aa17.14■□□□□ 0.33
SNX21-203ENST00000372541 LRRC26Q2I0M4 334 aa17.14■□□□□ 0.33
SNX21-203ENST00000372541 JAKMIP3Q5VZ66 844 aa17.14■□□□□ 0.33
SNX21-203ENST00000372541 NLRX1Q86UT6 975 aa17.14■□□□□ 0.33
SNX21-203ENST00000372541 GLT1D1Q96MS3 346 aa17.14■□□□□ 0.33
SNX21-203ENST00000372541 STARD7Q9NQZ5 370 aa17.14■□□□□ 0.33
SNX21-203ENST00000372541 SH2B1Q9NRF2 756 aaPredicted RBP17.14■□□□□ 0.33
SNX21-203ENST00000372541 RTEL1Q9NZ71 1219 aa17.14■□□□□ 0.33
SNX21-203ENST00000372541 FIBPO43427 364 aa17.13■□□□□ 0.33
SNX21-203ENST00000372541 CABYRO75952 493 aa17.13■□□□□ 0.33
SNX21-203ENST00000372541 TGFB3P10600 412 aa17.13■□□□□ 0.33
SNX21-203ENST00000372541 UBA1P22314 1058 aaKnown RBP17.13■□□□□ 0.33
SNX21-203ENST00000372541 SLC39A5Q6ZMH5 540 aa17.13■□□□□ 0.33
SNX21-203ENST00000372541 NSUN7Q8NE18 718 aaKnown RBP17.13■□□□□ 0.33
SNX21-203ENST00000372541 GPRASP2Q96D09 838 aa17.13■□□□□ 0.33
SNX21-203ENST00000372541 AIFM3Q96NN9 605 aa17.13■□□□□ 0.33
SNX21-203ENST00000372541 ORC3Q9UBD5 711 aaPredicted RBP17.13■□□□□ 0.33
SNX21-203ENST00000372541 KIAA1217Q5T5P2 1943 aa17.12■□□□□ 0.33
SNX21-203ENST00000372541 DNAH12Q6ZR08 3092 aa17.12■□□□□ 0.33
SNX21-203ENST00000372541 A6NJR5 290 aa17.12■□□□□ 0.33
SNX21-203ENST00000372541 ICAM3P32942 547 aa17.12■□□□□ 0.33
SNX21-203ENST00000372541 SREBF1P36956 1147 aa17.12■□□□□ 0.33
SNX21-203ENST00000372541 MDM2Q00987 491 aaPredicted RBP17.12■□□□□ 0.33
SNX21-203ENST00000372541 ARHGAP1Q07960 439 aa17.12■□□□□ 0.33
SNX21-203ENST00000372541 CXCL17Q6UXB2 119 aa17.12■□□□□ 0.33
SNX21-203ENST00000372541 CCDC83Q8IWF9 413 aa17.12■□□□□ 0.33
SNX21-203ENST00000372541 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.12■□□□□ 0.33
SNX21-203ENST00000372541 DHX37Q8IY37 1157 aaKnown RBP17.12■□□□□ 0.33
SNX21-203ENST00000372541 EMID1Q96A84 441 aaPredicted RBP17.12■□□□□ 0.33
SNX21-203ENST00000372541 VTI1AQ96AJ9 217 aa17.12■□□□□ 0.33
SNX21-203ENST00000372541 CDHR1Q96JP9 859 aa17.12■□□□□ 0.33
SNX21-203ENST00000372541 GUCD1Q96NT3 240 aa17.12■□□□□ 0.33
SNX21-203ENST00000372541 POLR3EQ9NVU0 708 aa17.12■□□□□ 0.33
SNX21-203ENST00000372541 PCDHA4Q9UN74 947 aa17.12■□□□□ 0.33
SNX21-203ENST00000372541 ATP11BQ9Y2G3 1177 aa17.12■□□□□ 0.33
SNX21-203ENST00000372541 ELP1O95163 1332 aa17.12■□□□□ 0.33
SNX21-203ENST00000372541 A0A0U1RQG5 324 aaPredicted RBP17.11■□□□□ 0.33
SNX21-203ENST00000372541 SPATA31C2B4DYI2 1134 aa17.11■□□□□ 0.33
SNX21-203ENST00000372541 DTNBO60941 627 aa17.11■□□□□ 0.33
SNX21-203ENST00000372541 GGPS1O95749 300 aa17.11■□□□□ 0.33
SNX21-203ENST00000372541 MYL3P08590 195 aa17.11■□□□□ 0.33
SNX21-203ENST00000372541 RTP1P59025 263 aa17.11■□□□□ 0.33
SNX21-203ENST00000372541 ST3GAL1Q11201 340 aa17.11■□□□□ 0.33
SNX21-203ENST00000372541 MTMR1Q13613 665 aa17.11■□□□□ 0.33
SNX21-203ENST00000372541 LAMC2Q13753 1193 aa17.11■□□□□ 0.33
SNX21-203ENST00000372541 SNX17Q15036 470 aa17.11■□□□□ 0.33
SNX21-203ENST00000372541 C1orf53Q5VUE5 145 aa17.11■□□□□ 0.33
SNX21-203ENST00000372541 GALNT17Q6IS24 598 aa17.11■□□□□ 0.33
SNX21-203ENST00000372541 DAGLBQ8NCG7 672 aa17.11■□□□□ 0.33
SNX21-203ENST00000372541 RASGRP4Q8TDF6 673 aa17.11■□□□□ 0.33
SNX21-203ENST00000372541 ALG1Q9BT22 464 aa17.11■□□□□ 0.33
SNX21-203ENST00000372541 UBIAD1Q9Y5Z9 338 aa17.11■□□□□ 0.33
SNX21-203ENST00000372541 EYSQ5T1H1 3165 aa17.1■□□□□ 0.33
SNX21-203ENST00000372541 ADAMTS3O15072 1205 aa17.1■□□□□ 0.33
SNX21-203ENST00000372541 JAK2O60674 1132 aa17.1■□□□□ 0.33
SNX21-203ENST00000372541 MMP3P08254 477 aa17.1■□□□□ 0.33
SNX21-203ENST00000372541 FDPSP14324 419 aaKnown RBP17.1■□□□□ 0.33
SNX21-203ENST00000372541 ITGB5P18084 799 aa17.1■□□□□ 0.33
SNX21-203ENST00000372541 ARHGAP4P98171 946 aa17.1■□□□□ 0.33
SNX21-203ENST00000372541 PURAQ00577 322 aaKnown RBP17.1■□□□□ 0.33
SNX21-203ENST00000372541 SP2Q02086 613 aa17.1■□□□□ 0.33
SNX21-203ENST00000372541 SEMA3FQ13275 785 aa17.1■□□□□ 0.33
SNX21-203ENST00000372541 NEDD9Q14511 834 aa17.1■□□□□ 0.33
SNX21-203ENST00000372541 TRIM60Q495X7 471 aa17.1■□□□□ 0.33
SNX21-203ENST00000372541 CELF3Q5SZQ8 465 aaKnown RBP17.1■□□□□ 0.33
SNX21-203ENST00000372541 BLIDQ8IZY5 108 aa17.1■□□□□ 0.33
SNX21-203ENST00000372541 PPTC7Q8NI37 304 aa17.1■□□□□ 0.33
SNX21-203ENST00000372541 AFG1LQ8WV93 481 aa17.1■□□□□ 0.33
SNX21-203ENST00000372541 PHF20Q9BVI0 1012 aa17.1■□□□□ 0.33
SNX21-203ENST00000372541 MLXIPQ9HAP2 919 aa17.1■□□□□ 0.33
SNX21-203ENST00000372541 SPTBN5Q9NRC6 3674 aaKnown RBP17.1■□□□□ 0.33
SNX21-203ENST00000372541 SORBS3O60504 671 aa17.09■□□□□ 0.33
SNX21-203ENST00000372541 KPNA6O60684 536 aa17.09■□□□□ 0.33
SNX21-203ENST00000372541 ZNF76P36508 570 aa17.09■□□□□ 0.33
SNX21-203ENST00000372541 CEP55Q53EZ4 464 aa17.09■□□□□ 0.33
SNX21-203ENST00000372541 MYSM1Q5VVJ2 828 aa17.09■□□□□ 0.33
SNX21-203ENST00000372541 GIMAP8Q8ND71 665 aaPredicted RBP17.09■□□□□ 0.33
SNX21-203ENST00000372541 SPATA33Q96N06 139 aa17.09■□□□□ 0.33
SNX21-203ENST00000372541 SENP7Q9BQF6 1050 aa17.09■□□□□ 0.33
SNX21-203ENST00000372541 MXRA8Q9BRK3 442 aa17.09■□□□□ 0.33
SNX21-203ENST00000372541 LLPHQ9BRT6 129 aaKnown RBP17.09■□□□□ 0.33
SNX21-203ENST00000372541 JADE2Q9NQC1 790 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms