RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 ZNF569Q5MCW4 686 aa12.79□□□□□ -0.36
TSPAN1-201ENST00000372003 FAM83BQ5T0W9 1011 aa12.79□□□□□ -0.36
TSPAN1-201ENST00000372003 ANKRD23Q86SG2 305 aa12.79□□□□□ -0.36
TSPAN1-201ENST00000372003 DIS3L2Q8IYB7 885 aaKnown RBP12.79□□□□□ -0.36
TSPAN1-201ENST00000372003 REM2Q8IYK8 340 aaPredicted RBP12.79□□□□□ -0.36
TSPAN1-201ENST00000372003 GMCL1P1Q8NEA9 526 aa12.79□□□□□ -0.36
TSPAN1-201ENST00000372003 ANKS1AQ92625 1134 aa12.79□□□□□ -0.36
TSPAN1-201ENST00000372003 LPAR1Q92633 364 aa12.79□□□□□ -0.36
TSPAN1-201ENST00000372003 PHKBQ93100 1093 aa12.79□□□□□ -0.36
TSPAN1-201ENST00000372003 C12orf42Q96LP6 360 aa12.79□□□□□ -0.36
TSPAN1-201ENST00000372003 MED15Q96RN5 788 aa12.79□□□□□ -0.36
TSPAN1-201ENST00000372003 DESI2Q9BSY9 194 aa12.79□□□□□ -0.36
TSPAN1-201ENST00000372003 SLC26A6Q9BXS9 759 aa12.79□□□□□ -0.36
TSPAN1-201ENST00000372003 FAM107BQ9H098 131 aa12.79□□□□□ -0.36
TSPAN1-201ENST00000372003 ABCB6Q9NP58 842 aa12.79□□□□□ -0.36
TSPAN1-201ENST00000372003 VPS18Q9P253 973 aa12.79□□□□□ -0.36
TSPAN1-201ENST00000372003 LIMA1Q9UHB6 759 aaKnown RBP12.79□□□□□ -0.36
TSPAN1-201ENST00000372003 TRPA1O75762 1119 aa12.78□□□□□ -0.36
TSPAN1-201ENST00000372003 CYP2C8P10632 490 aa12.78□□□□□ -0.36
TSPAN1-201ENST00000372003 SLC1A4P43007 532 aa12.78□□□□□ -0.36
TSPAN1-201ENST00000372003 TNNT3P45378 269 aaPredicted RBP12.78□□□□□ -0.36
TSPAN1-201ENST00000372003 MAP2K1Q02750 393 aaPredicted RBP12.78□□□□□ -0.36
TSPAN1-201ENST00000372003 CASP8Q14790 479 aa12.78□□□□□ -0.36
TSPAN1-201ENST00000372003 CCDC96Q2M329 555 aa12.78□□□□□ -0.36
TSPAN1-201ENST00000372003 CYP26C1Q6V0L0 522 aa12.78□□□□□ -0.36
TSPAN1-201ENST00000372003 KCTD1Q719H9 257 aa12.78□□□□□ -0.36
TSPAN1-201ENST00000372003 MICU3Q86XE3 530 aa12.78□□□□□ -0.36
TSPAN1-201ENST00000372003 RAB11FIP4Q86YS3 637 aa12.78□□□□□ -0.36
TSPAN1-201ENST00000372003 FERMT2Q96AC1 680 aa12.78□□□□□ -0.36
TSPAN1-201ENST00000372003 BEGAINQ9BUH8 593 aa12.78□□□□□ -0.36
TSPAN1-201ENST00000372003 LZTFL1Q9NQ48 299 aa12.78□□□□□ -0.36
TSPAN1-201ENST00000372003 FRMPD2Q68DX3 1309 aaPredicted RBP12.77□□□□□ -0.36
TSPAN1-201ENST00000372003 TARSL2A2RTX5 802 aaKnown RBP12.77□□□□□ -0.36
TSPAN1-201ENST00000372003 BTBD18B2RXH4 712 aa12.77□□□□□ -0.36
TSPAN1-201ENST00000372003 USP17L15C9J2P7 530 aa12.77□□□□□ -0.36
TSPAN1-201ENST00000372003 USP17L13C9JLJ4 530 aa12.77□□□□□ -0.36
TSPAN1-201ENST00000372003 USP17L11C9JVI0 530 aa12.77□□□□□ -0.36
TSPAN1-201ENST00000372003 USP17L18D6R9N7 530 aa12.77□□□□□ -0.36
TSPAN1-201ENST00000372003 USP17L22D6RA61 530 aa12.77□□□□□ -0.36
TSPAN1-201ENST00000372003 USP17L17D6RBQ6 530 aa12.77□□□□□ -0.36
TSPAN1-201ENST00000372003 USP17L19D6RCP7 530 aa12.77□□□□□ -0.36
TSPAN1-201ENST00000372003 USP17L20D6RJB6 530 aa12.77□□□□□ -0.36
TSPAN1-201ENST00000372003 WDR46O15213 610 aaKnown RBP12.77□□□□□ -0.36
TSPAN1-201ENST00000372003 BMP3P12645 472 aa12.77□□□□□ -0.36
TSPAN1-201ENST00000372003 OSBPP22059 807 aa12.77□□□□□ -0.36
TSPAN1-201ENST00000372003 IRX3P78415 501 aaPredicted RBP12.77□□□□□ -0.36
TSPAN1-201ENST00000372003 AMPD2Q01433 879 aa12.77□□□□□ -0.36
TSPAN1-201ENST00000372003 USP17L24Q0WX57 530 aa12.77□□□□□ -0.36
TSPAN1-201ENST00000372003 SEMA3FQ13275 785 aa12.77□□□□□ -0.36
TSPAN1-201ENST00000372003 PABPC4Q13310 644 aaKnown RBP eCLIP12.77□□□□□ -0.36
TSPAN1-201ENST00000372003 MCM6Q14566 821 aa12.77□□□□□ -0.36
TSPAN1-201ENST00000372003 TAF1CQ15572 869 aaPredicted RBP12.77□□□□□ -0.36
TSPAN1-201ENST00000372003 CATSPERGQ6ZRH7 1159 aa12.77□□□□□ -0.36
TSPAN1-201ENST00000372003 ANKRD20A12PQ8NF67 263 aa12.77□□□□□ -0.36
TSPAN1-201ENST00000372003 CCDC148Q8NFR7 591 aa12.77□□□□□ -0.36
TSPAN1-201ENST00000372003 NUP133Q8WUM0 1156 aa12.77□□□□□ -0.36
TSPAN1-201ENST00000372003 PNKPQ96T60 521 aa12.77□□□□□ -0.36
TSPAN1-201ENST00000372003 MYL10Q9BUA6 226 aa12.77□□□□□ -0.36
TSPAN1-201ENST00000372003 ASCC2Q9H1I8 757 aaPredicted RBP12.77□□□□□ -0.36
TSPAN1-201ENST00000372003 GPCPD1Q9NPB8 672 aa12.77□□□□□ -0.36
TSPAN1-201ENST00000372003 RNF186Q9NXI6 227 aa12.77□□□□□ -0.36
TSPAN1-201ENST00000372003 SYNPO2Q9UMS6 1093 aa12.77□□□□□ -0.36
TSPAN1-201ENST00000372003 ATAD5Q96QE3 1844 aa12.77□□□□□ -0.36
TSPAN1-201ENST00000372003 CEP350Q5VT06 3117 aa12.77□□□□□ -0.37
TSPAN1-201ENST00000372003 FLOT1O75955 427 aa12.77□□□□□ -0.37
TSPAN1-201ENST00000372003 ALDH1A1P00352 501 aa12.77□□□□□ -0.37
TSPAN1-201ENST00000372003 GOLGA8HP0CJ92 632 aa12.77□□□□□ -0.37
TSPAN1-201ENST00000372003 PDHBP11177 359 aa12.77□□□□□ -0.37
TSPAN1-201ENST00000372003 XBP1P17861 261 aa12.77□□□□□ -0.37
TSPAN1-201ENST00000372003 RXRAP19793 462 aa12.77□□□□□ -0.37
TSPAN1-201ENST00000372003 HOXA7P31268 230 aaPredicted RBP12.77□□□□□ -0.37
TSPAN1-201ENST00000372003 IKQ13123 557 aaPredicted RBP12.77□□□□□ -0.37
TSPAN1-201ENST00000372003 MTF1Q14872 753 aa12.77□□□□□ -0.37
TSPAN1-201ENST00000372003 RTN1Q16799 776 aa12.77□□□□□ -0.37
TSPAN1-201ENST00000372003 CATIPQ7Z7H3 387 aa12.77□□□□□ -0.37
TSPAN1-201ENST00000372003 TRMT44Q8IYL2 757 aaKnown RBP12.77□□□□□ -0.37
TSPAN1-201ENST00000372003 SLC35F6Q8N357 371 aa12.77□□□□□ -0.37
TSPAN1-201ENST00000372003 RUBCNQ92622 972 aa12.77□□□□□ -0.37
TSPAN1-201ENST00000372003 GMCL1Q96IK5 515 aa12.77□□□□□ -0.37
TSPAN1-201ENST00000372003 P2RX7Q99572 595 aaKnown RBP12.77□□□□□ -0.37
TSPAN1-201ENST00000372003 FBXO28Q9NVF7 368 aa12.77□□□□□ -0.37
TSPAN1-201ENST00000372003 PUF60Q9UHX1 559 aaKnown RBP12.77□□□□□ -0.37
TSPAN1-201ENST00000372003 MYO6Q9UM54 1294 aa12.77□□□□□ -0.37
TSPAN1-201ENST00000372003 MYH8P13535 1937 aa12.76□□□□□ -0.37
TSPAN1-201ENST00000372003 TEX33O43247 280 aa12.76□□□□□ -0.37
TSPAN1-201ENST00000372003 CKAP4Q07065 602 aaKnown RBP12.76□□□□□ -0.37
TSPAN1-201ENST00000372003 DPYDQ12882 1025 aa12.76□□□□□ -0.37
TSPAN1-201ENST00000372003 CRHR2Q13324 411 aa12.76□□□□□ -0.37
TSPAN1-201ENST00000372003 TTBK2Q6IQ55 1244 aa12.76□□□□□ -0.37
TSPAN1-201ENST00000372003 ZNF654Q8IZM8 581 aa12.76□□□□□ -0.37
TSPAN1-201ENST00000372003 EHBP1Q8NDI1 1231 aa12.76□□□□□ -0.37
TSPAN1-201ENST00000372003 SMCR8Q8TEV9 937 aaPredicted RBP12.76□□□□□ -0.37
TSPAN1-201ENST00000372003 DCAF4Q8WV16 495 aa12.76□□□□□ -0.37
TSPAN1-201ENST00000372003 RNF26Q9BY78 433 aaPredicted RBP12.76□□□□□ -0.37
TSPAN1-201ENST00000372003 R3HDMLQ9H3Y0 253 aa12.76□□□□□ -0.37
TSPAN1-201ENST00000372003 HAUS4Q9H6D7 363 aa12.76□□□□□ -0.37
TSPAN1-201ENST00000372003 YY1AP1Q9H869 796 aa12.76□□□□□ -0.37
TSPAN1-201ENST00000372003 ZFYVE28Q9HCC9 887 aa12.76□□□□□ -0.37
TSPAN1-201ENST00000372003 BRMS1Q9HCU9 246 aa12.76□□□□□ -0.37
TSPAN1-201ENST00000372003 RSPH14Q9UHP6 348 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms