RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 NXF1Q9UBU9 619 aaKnown RBP16.09■□□□□ 0.17
NDC1-201ENST00000371429 NEDD4P46934 1319 aa16.09■□□□□ 0.17
NDC1-201ENST00000371429 STRIP1Q5VSL9 837 aa16.09■□□□□ 0.17
NDC1-201ENST00000371429 CATSPER4Q7RTX7 472 aa16.09■□□□□ 0.17
NDC1-201ENST00000371429 NMT2O60551 498 aa16.08■□□□□ 0.17
NDC1-201ENST00000371429 HOXD10P28358 340 aa16.08■□□□□ 0.17
NDC1-201ENST00000371429 JAK3P52333 1124 aa16.08■□□□□ 0.17
NDC1-201ENST00000371429 KIF11P52732 1056 aa16.08■□□□□ 0.17
NDC1-201ENST00000371429 CUL4AQ13619 759 aa16.08■□□□□ 0.17
NDC1-201ENST00000371429 ZNF34Q8IZ26 560 aa16.08■□□□□ 0.17
NDC1-201ENST00000371429 HAUS1Q96CS2 278 aa16.08■□□□□ 0.17
NDC1-201ENST00000371429 RCOR1Q9UKL0 485 aa16.08■□□□□ 0.17
NDC1-201ENST00000371429 USP17L15C9J2P7 530 aa16.08■□□□□ 0.16
NDC1-201ENST00000371429 USP17L13C9JLJ4 530 aa16.08■□□□□ 0.16
NDC1-201ENST00000371429 USP17L11C9JVI0 530 aa16.08■□□□□ 0.16
NDC1-201ENST00000371429 USP17L18D6R9N7 530 aa16.08■□□□□ 0.16
NDC1-201ENST00000371429 USP17L22D6RA61 530 aa16.08■□□□□ 0.16
NDC1-201ENST00000371429 USP17L17D6RBQ6 530 aa16.08■□□□□ 0.16
NDC1-201ENST00000371429 USP17L19D6RCP7 530 aa16.08■□□□□ 0.16
NDC1-201ENST00000371429 USP17L20D6RJB6 530 aa16.08■□□□□ 0.16
NDC1-201ENST00000371429 SLC12A2P55011 1212 aa16.08■□□□□ 0.16
NDC1-201ENST00000371429 USP17L24Q0WX57 530 aa16.08■□□□□ 0.16
NDC1-201ENST00000371429 USP17L6PQ6QN14 398 aa16.08■□□□□ 0.16
NDC1-201ENST00000371429 SMYD4Q8IYR2 804 aaPredicted RBP16.08■□□□□ 0.16
NDC1-201ENST00000371429 ENAHQ8N8S7 591 aaPredicted RBP16.08■□□□□ 0.16
NDC1-201ENST00000371429 SAMD15Q9P1V8 674 aa16.08■□□□□ 0.16
NDC1-201ENST00000371429 FAM184BQ9ULE4 1060 aa16.08■□□□□ 0.16
NDC1-201ENST00000371429 SRPRBQ9Y5M8 271 aaKnown RBP16.08■□□□□ 0.16
NDC1-201ENST00000371429 GOLGA6CA6NDK9 693 aa16.08■□□□□ 0.16
NDC1-201ENST00000371429 GOLGA6BA6NDN3 693 aa16.08■□□□□ 0.16
NDC1-201ENST00000371429 GOLGA6DP0CG33 693 aa16.08■□□□□ 0.16
NDC1-201ENST00000371429 CAPN2P17655 700 aa16.08■□□□□ 0.16
NDC1-201ENST00000371429 ITKQ08881 620 aa16.08■□□□□ 0.16
NDC1-201ENST00000371429 ARL6IP4Q66PJ3 421 aaKnown RBP16.08■□□□□ 0.16
NDC1-201ENST00000371429 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.08■□□□□ 0.16
NDC1-201ENST00000371429 CCDC94Q9BW85 323 aaPredicted RBP16.08■□□□□ 0.16
NDC1-201ENST00000371429 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.08■□□□□ 0.16
NDC1-201ENST00000371429 GOLGA6AQ9NYA3 693 aa16.08■□□□□ 0.16
NDC1-201ENST00000371429 KCNK3O14649 394 aa16.08■□□□□ 0.16
NDC1-201ENST00000371429 AFPP02771 609 aaKnown RBP16.08■□□□□ 0.16
NDC1-201ENST00000371429 ARPP19P56211 112 aa16.08■□□□□ 0.16
NDC1-201ENST00000371429 SARNPP82979 210 aaKnown RBP16.08■□□□□ 0.16
NDC1-201ENST00000371429 C7orf31Q8N865 590 aa16.08■□□□□ 0.16
NDC1-201ENST00000371429 GIMAP8Q8ND71 665 aaPredicted RBP16.08■□□□□ 0.16
NDC1-201ENST00000371429 NRKQ7Z2Y5 1582 aa16.08■□□□□ 0.16
NDC1-201ENST00000371429 GNAT1P11488 350 aa16.07■□□□□ 0.16
NDC1-201ENST00000371429 HPDP32754 393 aaPredicted RBP16.07■□□□□ 0.16
NDC1-201ENST00000371429 PPP2R5CQ13362 524 aa16.07■□□□□ 0.16
NDC1-201ENST00000371429 GRAMD1CQ8IYS0 662 aa16.07■□□□□ 0.16
NDC1-201ENST00000371429 LARGE1O95461 756 aa16.07■□□□□ 0.16
NDC1-201ENST00000371429 EEF1GP26641 437 aaKnown RBP16.07■□□□□ 0.16
NDC1-201ENST00000371429 NME8Q8N427 588 aa16.07■□□□□ 0.16
NDC1-201ENST00000371429 FAM76AQ8TAV0 307 aa16.07■□□□□ 0.16
NDC1-201ENST00000371429 DESI2Q9BSY9 194 aa16.07■□□□□ 0.16
NDC1-201ENST00000371429 SAR1BQ9Y6B6 198 aa16.07■□□□□ 0.16
NDC1-201ENST00000371429 TRPM1Q7Z4N2 1603 aa16.07■□□□□ 0.16
NDC1-201ENST00000371429 MYO1EQ12965 1108 aa16.07■□□□□ 0.16
NDC1-201ENST00000371429 PAK2Q13177 524 aa16.07■□□□□ 0.16
NDC1-201ENST00000371429 SETDB1Q15047 1291 aa16.07■□□□□ 0.16
NDC1-201ENST00000371429 NKX1-1Q15270 411 aaPredicted RBP16.07■□□□□ 0.16
NDC1-201ENST00000371429 PTPROQ16827 1216 aa16.07■□□□□ 0.16
NDC1-201ENST00000371429 FAM167AQ96KS9 214 aa16.07■□□□□ 0.16
NDC1-201ENST00000371429 PLA2G12BQ9BX93 195 aa16.07■□□□□ 0.16
NDC1-201ENST00000371429 CLTCQ00610 1675 aaKnown RBP16.07■□□□□ 0.16
NDC1-201ENST00000371429 MYO1FO00160 1098 aa16.07■□□□□ 0.16
NDC1-201ENST00000371429 ZNF658Q5TYW1 1059 aaPredicted RBP16.07■□□□□ 0.16
NDC1-201ENST00000371429 FASTKD5Q7L8L6 764 aaKnown RBP16.07■□□□□ 0.16
NDC1-201ENST00000371429 PTPRMP28827 1452 aa16.07■□□□□ 0.16
NDC1-201ENST00000371429 BUB1O43683 1085 aa16.06■□□□□ 0.16
NDC1-201ENST00000371429 ALX1Q15699 326 aa16.06■□□□□ 0.16
NDC1-201ENST00000371429 RSPH14Q9UHP6 348 aa16.06■□□□□ 0.16
NDC1-201ENST00000371429 ABCB11O95342 1321 aa16.06■□□□□ 0.16
NDC1-201ENST00000371429 GSG1L2A8MUP6 293 aa16.06■□□□□ 0.16
NDC1-201ENST00000371429 THAP12O43422 761 aa16.06■□□□□ 0.16
NDC1-201ENST00000371429 STAT3P40763 770 aa16.06■□□□□ 0.16
NDC1-201ENST00000371429 PFKFB3Q16875 520 aaPredicted RBP16.06■□□□□ 0.16
NDC1-201ENST00000371429 MAP7D3Q8IWC1 876 aa16.06■□□□□ 0.16
NDC1-201ENST00000371429 TCP11Q8WWU5 503 aa16.06■□□□□ 0.16
NDC1-201ENST00000371429 ZBED2Q9BTP6 218 aa16.06■□□□□ 0.16
NDC1-201ENST00000371429 BZW2Q9Y6E2 419 aaKnown RBP16.06■□□□□ 0.16
NDC1-201ENST00000371429 TYW5A2RUC4 315 aaKnown RBP16.06■□□□□ 0.16
NDC1-201ENST00000371429 A6NJR5 290 aa16.06■□□□□ 0.16
NDC1-201ENST00000371429 FDX1P10109 184 aa16.06■□□□□ 0.16
NDC1-201ENST00000371429 DDIT3P35638 169 aa16.06■□□□□ 0.16
NDC1-201ENST00000371429 SLC16A10Q8TF71 515 aa16.06■□□□□ 0.16
NDC1-201ENST00000371429 RAB17Q9H0T7 212 aa16.06■□□□□ 0.16
NDC1-201ENST00000371429 TBC1D22BQ9NU19 505 aa16.06■□□□□ 0.16
NDC1-201ENST00000371429 LMTK2Q8IWU2 1503 aa16.06■□□□□ 0.16
NDC1-201ENST00000371429 WDR64B1ANS9 1081 aa16.06■□□□□ 0.16
NDC1-201ENST00000371429 FCER1AP12319 257 aa16.06■□□□□ 0.16
NDC1-201ENST00000371429 ITPK1Q13572 414 aa16.06■□□□□ 0.16
NDC1-201ENST00000371429 CYB5R4Q7L1T6 521 aa16.06■□□□□ 0.16
NDC1-201ENST00000371429 CROCCP2Q86T23 111 aa16.06■□□□□ 0.16
NDC1-201ENST00000371429 C17orf53Q8N3J3 647 aaPredicted RBP16.06■□□□□ 0.16
NDC1-201ENST00000371429 FAM81BQ96LP2 452 aa16.06■□□□□ 0.16
NDC1-201ENST00000371429 VPS37BQ9H9H4 285 aa16.06■□□□□ 0.16
NDC1-201ENST00000371429 RPF1Q9H9Y2 349 aaKnown RBP16.06■□□□□ 0.16
NDC1-201ENST00000371429 SPDYE16A6NNV3 312 aaPredicted RBP16.05■□□□□ 0.16
NDC1-201ENST00000371429 HMGCS2P54868 508 aa16.05■□□□□ 0.16
NDC1-201ENST00000371429 MAN2A1Q16706 1144 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms