RNA–Protein interactions for RNA: ENST00000371118.1

ATG4C-202, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-202ENST00000371118 USP5P45974 858 aa7.34□□□□□ -1.23
ATG4C-202ENST00000371118 SMAD4Q13485 552 aaKnown RBP7.34□□□□□ -1.23
ATG4C-202ENST00000371118 SLFNL1Q499Z3 407 aa7.34□□□□□ -1.23
ATG4C-202ENST00000371118 EPC2Q52LR7 807 aa7.34□□□□□ -1.23
ATG4C-202ENST00000371118 TATDN1Q6P1N9 297 aa7.34□□□□□ -1.23
ATG4C-202ENST00000371118 LIAT1Q6ZQX7 453 aa7.34□□□□□ -1.23
ATG4C-202ENST00000371118 ARMCX2Q7L311 632 aa7.34□□□□□ -1.23
ATG4C-202ENST00000371118 CCDC144CPQ8IYA2 1237 aa7.34□□□□□ -1.23
ATG4C-202ENST00000371118 MSL3Q8N5Y2 521 aaKnown RBP7.34□□□□□ -1.23
ATG4C-202ENST00000371118 SPATA5Q8NB90 893 aa7.34□□□□□ -1.23
ATG4C-202ENST00000371118 RIPOR3Q96MK2 946 aa7.34□□□□□ -1.23
ATG4C-202ENST00000371118 NEUROD6Q96NK8 337 aa7.34□□□□□ -1.23
ATG4C-202ENST00000371118 INCENPQ9NQS7 918 aa7.34□□□□□ -1.23
ATG4C-202ENST00000371118 SH2B1Q9NRF2 756 aaPredicted RBP7.34□□□□□ -1.23
ATG4C-202ENST00000371118 FBXO28Q9NVF7 368 aa7.34□□□□□ -1.23
ATG4C-202ENST00000371118 HMG20BQ9P0W2 317 aa7.34□□□□□ -1.23
ATG4C-202ENST00000371118 SERPINB13Q9UIV8 391 aa7.34□□□□□ -1.23
ATG4C-202ENST00000371118 A0A1B0GUL7 405 aa7.33□□□□□ -1.24
ATG4C-202ENST00000371118 LINC01565O15544 149 aa7.33□□□□□ -1.24
ATG4C-202ENST00000371118 NCK2O43639 380 aa7.33□□□□□ -1.24
ATG4C-202ENST00000371118 SP100P23497 879 aaPredicted RBP7.33□□□□□ -1.24
ATG4C-202ENST00000371118 GUCY1A2P33402 732 aa7.33□□□□□ -1.24
ATG4C-202ENST00000371118 NDUFV1P49821 464 aa7.33□□□□□ -1.24
ATG4C-202ENST00000371118 DYNLL1P63167 89 aaKnown RBP7.33□□□□□ -1.24
ATG4C-202ENST00000371118 COL9A3Q14050 684 aaPredicted RBP7.33□□□□□ -1.24
ATG4C-202ENST00000371118 RSPO4Q2I0M5 234 aaPredicted RBP7.33□□□□□ -1.24
ATG4C-202ENST00000371118 SNRNP48Q6IEG0 339 aaKnown RBP7.33□□□□□ -1.24
ATG4C-202ENST00000371118 MAMDC4Q6UXC1 1216 aa7.33□□□□□ -1.24
ATG4C-202ENST00000371118 EEPD1Q7L9B9 569 aa7.33□□□□□ -1.24
ATG4C-202ENST00000371118 CLEC10AQ8IUN9 316 aa7.33□□□□□ -1.24
ATG4C-202ENST00000371118 ANKRD35Q8N283 1001 aa7.33□□□□□ -1.24
ATG4C-202ENST00000371118 TMEM105Q8N8V8 129 aa7.33□□□□□ -1.24
ATG4C-202ENST00000371118 EHBP1Q8NDI1 1231 aa7.33□□□□□ -1.24
ATG4C-202ENST00000371118 FAM174AQ8TBP5 190 aa7.33□□□□□ -1.24
ATG4C-202ENST00000371118 CCER1Q8TC90 406 aaPredicted RBP7.33□□□□□ -1.24
ATG4C-202ENST00000371118 XAGE2Q96GT9 111 aa7.33□□□□□ -1.24
ATG4C-202ENST00000371118 SEZ6LQ9BYH1 1024 aa7.33□□□□□ -1.24
ATG4C-202ENST00000371118 INSL6Q9Y581 213 aa7.33□□□□□ -1.24
ATG4C-202ENST00000371118 MYO7AQ13402 2215 aa7.33□□□□□ -1.24
ATG4C-202ENST00000371118 SIP14410 1827 aa7.33□□□□□ -1.24
ATG4C-202ENST00000371118 FASNP49327 2511 aaKnown RBP7.33□□□□□ -1.24
ATG4C-202ENST00000371118 PTPRSQ13332 1948 aa7.33□□□□□ -1.24
ATG4C-202ENST00000371118 LOC730098B7Z3J9 87 aa7.32□□□□□ -1.24
ATG4C-202ENST00000371118 H3BNC9 293 aa7.32□□□□□ -1.24
ATG4C-202ENST00000371118 VWA5AO00534 786 aa7.32□□□□□ -1.24
ATG4C-202ENST00000371118 TBX10O75333 385 aa7.32□□□□□ -1.24
ATG4C-202ENST00000371118 VAMP4O75379 141 aa7.32□□□□□ -1.24
ATG4C-202ENST00000371118 SMPD1P17405 629 aa7.32□□□□□ -1.24
ATG4C-202ENST00000371118 VARSP26640 1264 aaKnown RBP7.32□□□□□ -1.24
ATG4C-202ENST00000371118 RFX5P48382 616 aaPredicted RBP7.32□□□□□ -1.24
ATG4C-202ENST00000371118 HYAL1Q12794 435 aa7.32□□□□□ -1.24
ATG4C-202ENST00000371118 BFSP2Q13515 415 aa7.32□□□□□ -1.24
ATG4C-202ENST00000371118 MVPQ14764 893 aaKnown RBP7.32□□□□□ -1.24
ATG4C-202ENST00000371118 C4orf48Q5BLP8 95 aa7.32□□□□□ -1.24
ATG4C-202ENST00000371118 TMEM63BQ5T3F8 832 aa7.32□□□□□ -1.24
ATG4C-202ENST00000371118 ADGRA1Q86SQ6 560 aa7.32□□□□□ -1.24
ATG4C-202ENST00000371118 CPXCR1Q8N123 301 aa7.32□□□□□ -1.24
ATG4C-202ENST00000371118 TET1Q8NFU7 2136 aa7.32□□□□□ -1.24
ATG4C-202ENST00000371118 MFSD1Q9H3U5 465 aa7.32□□□□□ -1.24
ATG4C-202ENST00000371118 RIPK3Q9Y572 518 aa7.32□□□□□ -1.24
ATG4C-202ENST00000371118 CTDP1Q9Y5B0 961 aaPredicted RBP7.32□□□□□ -1.24
ATG4C-202ENST00000371118 DDX49Q9Y6V7 483 aaKnown RBP7.32□□□□□ -1.24
ATG4C-202ENST00000371118 USP24Q9UPU5 2620 aa7.32□□□□□ -1.24
ATG4C-202ENST00000371118 MCM3APO60318 1980 aa7.31□□□□□ -1.24
ATG4C-202ENST00000371118 PDS5AQ29RF7 1337 aaKnown RBP7.31□□□□□ -1.24
ATG4C-202ENST00000371118 UPP2O95045 317 aa7.31□□□□□ -1.24
ATG4C-202ENST00000371118 LMNAP02545 664 aaKnown RBP7.31□□□□□ -1.24
ATG4C-202ENST00000371118 POLR3DP05423 398 aaPredicted RBP7.31□□□□□ -1.24
ATG4C-202ENST00000371118 SHMT1P34896 483 aa7.31□□□□□ -1.24
ATG4C-202ENST00000371118 COPB2P35606 906 aa7.31□□□□□ -1.24
ATG4C-202ENST00000371118 IL15P40933 162 aaPredicted RBP7.31□□□□□ -1.24
ATG4C-202ENST00000371118 MCAMP43121 646 aa7.31□□□□□ -1.24
ATG4C-202ENST00000371118 IKBKEQ14164 716 aa7.31□□□□□ -1.24
ATG4C-202ENST00000371118 COL19A1Q14993 1142 aa7.31□□□□□ -1.24
ATG4C-202ENST00000371118 PTPN21Q16825 1174 aa7.31□□□□□ -1.24
ATG4C-202ENST00000371118 TCTN1Q2MV58 587 aa7.31□□□□□ -1.24
ATG4C-202ENST00000371118 LCE2CQ5TA81 110 aa7.31□□□□□ -1.24
ATG4C-202ENST00000371118 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.31□□□□□ -1.24
ATG4C-202ENST00000371118 TTC6Q86TZ1 520 aa7.31□□□□□ -1.24
ATG4C-202ENST00000371118 ZNF598Q86UK7 904 aaKnown RBP7.31□□□□□ -1.24
ATG4C-202ENST00000371118 TMEM192Q8IY95 271 aa7.31□□□□□ -1.24
ATG4C-202ENST00000371118 MYOCDQ8IZQ8 938 aa7.31□□□□□ -1.24
ATG4C-202ENST00000371118 DEPDC4Q8N2C3 294 aa7.31□□□□□ -1.24
ATG4C-202ENST00000371118 DCLK2Q8N568 766 aa7.31□□□□□ -1.24
ATG4C-202ENST00000371118 MIGA1Q8NAN2 632 aa7.31□□□□□ -1.24
ATG4C-202ENST00000371118 YME1L1Q96TA2 773 aa7.31□□□□□ -1.24
ATG4C-202ENST00000371118 ARHGEF10LQ9HCE6 1279 aa7.31□□□□□ -1.24
ATG4C-202ENST00000371118 PDGFCQ9NRA1 345 aa7.31□□□□□ -1.24
ATG4C-202ENST00000371118 HOMER2Q9NSB8 354 aa7.31□□□□□ -1.24
ATG4C-202ENST00000371118 CDV3Q9UKY7 258 aaKnown RBP7.31□□□□□ -1.24
ATG4C-202ENST00000371118 PA2G4Q9UQ80 394 aaKnown RBP7.31□□□□□ -1.24
ATG4C-202ENST00000371118 PCDHGC5Q9Y5F6 944 aa7.31□□□□□ -1.24
ATG4C-202ENST00000371118 CEP250Q9BV73 2442 aa7.31□□□□□ -1.24
ATG4C-202ENST00000371118 COL11A1P12107 1806 aaPredicted RBP7.31□□□□□ -1.24
ATG4C-202ENST00000371118 DNAJC25-GNG10A0A024R161 153 aa7.3□□□□□ -1.24
ATG4C-202ENST00000371118 ABHD14A-ACY1A0A1B0GW23 586 aa7.3□□□□□ -1.24
ATG4C-202ENST00000371118 CIAO1O76071 339 aa7.3□□□□□ -1.24
ATG4C-202ENST00000371118 PLCD1P51178 756 aa7.3□□□□□ -1.24
ATG4C-202ENST00000371118 RRP1P56182 461 aaKnown RBP7.3□□□□□ -1.24
ATG4C-202ENST00000371118 SKOR1P84550 965 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms