RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 CIB2O75838 187 aa12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 ALCAMQ13740 583 aa12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 RASA3Q14644 834 aa12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 STOX1Q6ZVD7 989 aa12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 RSAD2Q8WXG1 361 aa12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 INO80Q9ULG1 1556 aaPredicted RBP12.92□□□□□ -0.34
DEPDC1-201ENST00000370966 KIAA1210Q9ULL0 1709 aa12.92□□□□□ -0.34
DEPDC1-201ENST00000370966 MYO3AQ8NEV4 1616 aa12.92□□□□□ -0.34
DEPDC1-201ENST00000370966 LGALS16A8MUM7 142 aa12.92□□□□□ -0.34
DEPDC1-201ENST00000370966 PHBP35232 272 aa12.92□□□□□ -0.34
DEPDC1-201ENST00000370966 LMNB2Q03252 620 aa12.92□□□□□ -0.34
DEPDC1-201ENST00000370966 TAF12Q16514 161 aa12.92□□□□□ -0.34
DEPDC1-201ENST00000370966 SLC7A3Q8WY07 619 aa12.92□□□□□ -0.34
DEPDC1-201ENST00000370966 PBKQ96KB5 322 aa12.92□□□□□ -0.34
DEPDC1-201ENST00000370966 PARD6BQ9BYG5 372 aa12.92□□□□□ -0.34
DEPDC1-201ENST00000370966 GDAQ9Y2T3 454 aa12.92□□□□□ -0.34
DEPDC1-201ENST00000370966 CLRN2A0PK11 232 aa12.92□□□□□ -0.34
DEPDC1-201ENST00000370966 GDF11O95390 407 aa12.92□□□□□ -0.34
DEPDC1-201ENST00000370966 KIF11P52732 1056 aa12.92□□□□□ -0.34
DEPDC1-201ENST00000370966 SCARF1Q14162 830 aa12.92□□□□□ -0.34
DEPDC1-201ENST00000370966 GKAP1Q5VSY0 366 aaPredicted RBP12.92□□□□□ -0.34
DEPDC1-201ENST00000370966 FAM160B1Q5W0V3 765 aa12.92□□□□□ -0.34
DEPDC1-201ENST00000370966 CCDC125Q86Z20 511 aa12.92□□□□□ -0.34
DEPDC1-201ENST00000370966 PROM2Q8N271 834 aa12.92□□□□□ -0.34
DEPDC1-201ENST00000370966 SH3RF3Q8TEJ3 882 aaPredicted RBP12.92□□□□□ -0.34
DEPDC1-201ENST00000370966 CELF1Q92879 486 aaKnown RBP12.92□□□□□ -0.34
DEPDC1-201ENST00000370966 MAGOHBQ96A72 148 aaKnown RBP12.92□□□□□ -0.34
DEPDC1-201ENST00000370966 CD209Q9NNX6 404 aa12.92□□□□□ -0.34
DEPDC1-201ENST00000370966 SERPINA10Q9UK55 444 aa12.92□□□□□ -0.34
DEPDC1-201ENST00000370966 I3L4J1 428 aa12.92□□□□□ -0.34
DEPDC1-201ENST00000370966 HEXIM1O94992 359 aaKnown RBP12.92□□□□□ -0.34
DEPDC1-201ENST00000370966 NEDD9Q14511 834 aa12.92□□□□□ -0.34
DEPDC1-201ENST00000370966 CCDC62Q6P9F0 684 aa12.92□□□□□ -0.34
DEPDC1-201ENST00000370966 SLC5A4Q9NY91 659 aa12.92□□□□□ -0.34
DEPDC1-201ENST00000370966 BCS1LQ9Y276 419 aa12.92□□□□□ -0.34
DEPDC1-201ENST00000370966 RNF8O76064 485 aa12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 DDIT3P35638 169 aa12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 RASSF2P50749 326 aa12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 SARNPP82979 210 aaKnown RBP12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 CUL4BQ13620 913 aa12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 ANKRD20A3Q5VUR7 823 aa12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 PNMA8AQ86V59 439 aaPredicted RBP12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 ATP2A3Q93084 1043 aa12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 ZNF512BQ96KM6 892 aaPredicted RBP12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 ANAPC4Q9UJX5 808 aa12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 A0A1B0GUA9 196 aa12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 CYP2D6P10635 497 aa12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 ARID5BQ14865 1188 aa12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 PPP1R18Q6NYC8 613 aa12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 HAUS1Q96CS2 278 aa12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 PAGR1Q9BTK6 254 aa12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 SUGCTQ9HAC7 445 aa12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 DAAM1Q9Y4D1 1078 aa12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 CACNB1Q02641 598 aaPredicted RBP12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 MESDQ14696 234 aa12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 GRM4Q14833 912 aa12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 UBE2SQ16763 222 aa12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 METTL13Q8N6R0 699 aa12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 DCAF4Q8WV16 495 aa12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 HESX1Q9UBX0 185 aa12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 OVOS2A0A0G2JMS6 1433 aa12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 ZBTB5O15062 677 aa12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 TMOD1P28289 359 aa12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 HSPA1LP34931 641 aa12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 CLCN6P51797 869 aa12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 YARSP54577 528 aaKnown RBP12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 IRX5P78411 483 aaPredicted RBP12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 CYP27A1Q02318 531 aa12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 PTPROQ16827 1216 aa12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 KRT27Q7Z3Y8 459 aa12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 CCDC117Q8IWD4 279 aaPredicted RBP12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 PALM2Q8IXS6 379 aa12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 FAM133AQ8N9E0 248 aa12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 MCUR1Q96AQ8 359 aa12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 GCNT4Q9P109 453 aa12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 PCDHA13Q9Y5I0 950 aa12.91□□□□□ -0.34
DEPDC1-201ENST00000370966 UTYO14607 1347 aa12.9□□□□□ -0.34
DEPDC1-201ENST00000370966 M0QZ92 97 aa12.9□□□□□ -0.34
DEPDC1-201ENST00000370966 ATP1A2P50993 1020 aa12.9□□□□□ -0.34
DEPDC1-201ENST00000370966 OXER1Q8TDS5 423 aa12.9□□□□□ -0.34
DEPDC1-201ENST00000370966 EPB41L5Q9HCM4 733 aa12.9□□□□□ -0.34
DEPDC1-201ENST00000370966 THAP12O43422 761 aa12.9□□□□□ -0.34
DEPDC1-201ENST00000370966 STAM2O75886 525 aa12.9□□□□□ -0.34
DEPDC1-201ENST00000370966 ATF2P15336 505 aa12.9□□□□□ -0.34
DEPDC1-201ENST00000370966 PODNQ7Z5L7 613 aa12.9□□□□□ -0.34
DEPDC1-201ENST00000370966 KMT5AQ9NQR1 393 aa12.9□□□□□ -0.34
DEPDC1-201ENST00000370966 KLHL14Q9P2G3 628 aa12.9□□□□□ -0.34
DEPDC1-201ENST00000370966 CEMIPQ8WUJ3 1361 aa12.9□□□□□ -0.34
DEPDC1-201ENST00000370966 MEIS1O00470 390 aa12.9□□□□□ -0.34
DEPDC1-201ENST00000370966 CLIC2O15247 247 aa12.9□□□□□ -0.34
DEPDC1-201ENST00000370966 CSF1RP07333 972 aa12.9□□□□□ -0.34
DEPDC1-201ENST00000370966 TROVE2P10155 538 aaKnown RBP eCLIP12.9□□□□□ -0.34
DEPDC1-201ENST00000370966 ATF7P17544 494 aaPredicted RBP12.9□□□□□ -0.34
DEPDC1-201ENST00000370966 VPS41P49754 854 aa12.9□□□□□ -0.34
DEPDC1-201ENST00000370966 MXI1P50539 228 aa12.9□□□□□ -0.34
DEPDC1-201ENST00000370966 ADAT2Q7Z6V5 191 aaKnown RBP12.9□□□□□ -0.34
DEPDC1-201ENST00000370966 BHMT2Q9H2M3 363 aa12.9□□□□□ -0.34
DEPDC1-201ENST00000370966 ZNF408Q9H9D4 720 aa12.9□□□□□ -0.34
DEPDC1-201ENST00000370966 ZNF148Q9UQR1 794 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms